Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP16_F_K23
         (898 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC091125-2|AAK27887.2|  202|Caenorhabditis elegans Hypothetical ...    75   7e-14
Z81089-1|CAB03135.2|  957|Caenorhabditis elegans Hypothetical pr...    29   4.5  
Z78539-5|CAB01733.2| 1272|Caenorhabditis elegans Hypothetical pr...    28   7.9  

>AC091125-2|AAK27887.2|  202|Caenorhabditis elegans Hypothetical
           protein Y67D2.5 protein.
          Length = 202

 Score = 74.9 bits (176), Expect = 7e-14
 Identities = 45/125 (36%), Positives = 75/125 (60%), Gaps = 12/125 (9%)
 Frame = +1

Query: 358 DAMIGDTNIFITDK--------ELAIGEIEIMIAEPSARGKKRGWEAVKLMLLYGIKYIK 513
           D M+GD N+FI+          ++  GE+E+MIAEP  RGK  G EAV++++ +  + +K
Sbjct: 79  DHMLGDVNLFISTSPSTENPSDDVITGEVEVMIAEPRGRGKGIGEEAVRVIIAWAYENLK 138

Query: 514 IQTFEAKISLQNVISIKMF-KKLGFQEKSVSAVFQEVTLD---KKVSNEWTQWLASSLSF 681
           I+ F  KI+  N  S+ +F KKLGF++   S  F+E T +    ++ +E++ +L  +   
Sbjct: 139 IEQFCVKITDDNTPSLSLFKKKLGFKQIGYSTAFKEFTFELPKNRLISEFSSFLEKNA-- 196

Query: 682 EIKDY 696
           EIK+Y
Sbjct: 197 EIKEY 201


>Z81089-1|CAB03135.2|  957|Caenorhabditis elegans Hypothetical
           protein F53H4.1 protein.
          Length = 957

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 22/92 (23%), Positives = 41/92 (44%)
 Frame = +1

Query: 415 EIEIMIAEPSARGKKRGWEAVKLMLLYGIKYIKIQTFEAKISLQNVISIKMFKKLGFQEK 594
           ++E   A+   + K  G+E  KL+L        +   E  ISLQN  S+   +K+  ++ 
Sbjct: 720 KVEKKAAKKRMKNKLAGFEDKKLLLSLFDDDKLVAMREHSISLQNSSSMNRIEKMKMRKS 779

Query: 595 SVSAVFQEVTLDKKVSNEWTQWLASSLSFEIK 690
              AV   +  + ++++ W Q     L   +K
Sbjct: 780 IDDAVGSLLHTEGRLAHTWKQVFHKQLRKTLK 811


>Z78539-5|CAB01733.2| 1272|Caenorhabditis elegans Hypothetical
           protein C31E10.8 protein.
          Length = 1272

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 13/70 (18%), Positives = 35/70 (50%)
 Frame = +1

Query: 511 KIQTFEAKISLQNVISIKMFKKLGFQEKSVSAVFQEVTLDKKVSNEWTQWLASSLSFEIK 690
           +I+    ++   N+++ ++ KK+    + V ++   +T +K +SN +      +  F + 
Sbjct: 632 RIELKNMQLQYVNLLAERLEKKMRRANEFVKSIANNLTNEKLISNIFIDTFTPNTGFIVS 691

Query: 691 DYH*LNQIKG 720
            +H + +I G
Sbjct: 692 GHHLMGKIAG 701


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,824,793
Number of Sequences: 27780
Number of extensions: 272241
Number of successful extensions: 523
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 512
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 521
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2276333906
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)