Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP16_F_K21
(975 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC103851-1|AAI03852.1| 130|Homo sapiens HMG4L protein protein. 42 0.003
BC103850-1|AAI03851.1| 130|Homo sapiens HMG4L protein protein. 42 0.003
BC103849-1|AAI03850.1| 130|Homo sapiens HMG4L protein protein. 42 0.003
BT006716-1|AAP35362.1| 347|Homo sapiens high-mobility group 20A... 41 0.006
BC021959-1|AAH21959.1| 347|Homo sapiens high-mobility group 20A... 41 0.006
AL355737-1|CAB90816.1| 347|Homo sapiens HMG20A protein. 41 0.006
AK223100-1|BAD96820.1| 347|Homo sapiens high-mobility group 20A... 41 0.006
AK001601-1|BAA91782.1| 347|Homo sapiens protein ( Homo sapiens ... 41 0.006
AF146222-1|AAF66706.1| 347|Homo sapiens HMG domain protein HMGX... 41 0.006
Y10043-1|CAA71143.1| 200|Homo sapiens high mobility group prote... 41 0.008
BC070482-1|AAH70482.1| 200|Homo sapiens HMGB3 protein protein. 41 0.008
D63874-1|BAA09924.1| 215|Homo sapiens HMG-1 protein. 38 0.042
M86737-1|AAA58660.1| 709|Homo sapiens high mobility group box p... 38 0.056
BC091486-1|AAH91486.1| 633|Homo sapiens SSRP1 protein protein. 38 0.056
BC005116-1|AAH05116.1| 709|Homo sapiens structure specific reco... 38 0.056
AB208998-1|BAD92235.1| 176|Homo sapiens high-mobility group box... 38 0.056
BC141844-1|AAI41845.1| 215|Homo sapiens high-mobility group box... 38 0.073
X12597-1|CAA31110.1| 215|Homo sapiens protein ( Human mRNA for ... 37 0.097
U51677-1|AAB08987.1| 215|Homo sapiens non-histone chromatin pro... 37 0.097
EU012027-1|ABS29271.1| 215|Homo sapiens high-mobility group box... 37 0.097
EF157968-1|ABM47301.1| 215|Homo sapiens high mobility group box... 37 0.097
CR456863-1|CAG33144.1| 215|Homo sapiens HMGB1 protein. 37 0.097
BT020159-1|AAV38961.1| 215|Homo sapiens high-mobility group box... 37 0.097
BT006940-1|AAP35586.1| 215|Homo sapiens high-mobility group box... 37 0.097
BC067732-1|AAH67732.1| 215|Homo sapiens high-mobility group box... 37 0.097
BC066889-1|AAH66889.1| 215|Homo sapiens high-mobility group box... 37 0.097
BC030981-1|AAH30981.1| 215|Homo sapiens high-mobility group box... 37 0.097
BC003378-1|AAH03378.1| 215|Homo sapiens high-mobility group box... 37 0.097
AY377859-1|AAQ91389.1| 215|Homo sapiens high mobility group pro... 37 0.097
AL353648-1|CAI15600.1| 215|Homo sapiens high-mobility group box... 37 0.097
Z17240-1|CAA78938.1| 186|Homo sapiens HMG2B protein. 36 0.17
X62534-1|CAA44395.1| 209|Homo sapiens HMG-2 protein. 36 0.17
M83665-1|AAA58659.1| 209|Homo sapiens high mobility group 2 pro... 36 0.17
BT019783-1|AAV38586.1| 208|Homo sapiens high-mobility group box... 36 0.17
BT019782-1|AAV38585.1| 209|Homo sapiens high-mobility group box... 36 0.17
BC100019-1|AAI00020.1| 209|Homo sapiens HMGB2 protein protein. 36 0.17
BC001063-1|AAH01063.1| 209|Homo sapiens high-mobility group box... 36 0.17
AL353648-3|CAI15603.1| 158|Homo sapiens high-mobility group box... 36 0.30
L79988-1|AAL77438.1| 403|Homo sapiens nuclear autoantigen protein. 35 0.39
AF076675-2|AAF39781.1| 181|Homo sapiens SP100-HMG protein. 35 0.39
AF056322-1|AAC39790.1| 879|Homo sapiens SP100-HMG nuclear autoa... 35 0.39
AC010149-1|AAY14879.1| 843|Homo sapiens unknown protein. 35 0.39
X56687-1|CAA40016.1| 727|Homo sapiens autoantigen NOR-90 protein. 34 0.90
X53461-1|CAA37548.1| 764|Homo sapiens protein ( Human mRNA for ... 34 0.90
X53390-1|CAA37469.1| 764|Homo sapiens protein ( Human mRNA for ... 34 0.90
BC042297-1|AAH42297.1| 727|Homo sapiens upstream binding transc... 34 0.90
BC031423-1|AAH31423.1| 313|Homo sapiens UBTF protein protein. 34 0.90
U13695-1|AAA63922.1| 932|Homo sapiens hPMS1 protein. 33 1.6
L08048-1|AAA64970.1| 216|Homo sapiens HMG-1 protein. 33 1.6
BC096332-1|AAH96332.1| 920|Homo sapiens PMS1 protein protein. 33 1.6
BC096330-1|AAH96330.1| 920|Homo sapiens PMS1 protein protein. 33 1.6
AY540751-1|ABB04020.1| 659|Homo sapiens rhabdomyosarcoma antige... 33 1.6
AY540750-1|ABB04019.1| 584|Homo sapiens rhabdomyosarcoma antige... 33 1.6
AY267352-1|AAO89079.1| 932|Homo sapiens PMS1 postmeiotic segreg... 33 1.6
AB102875-1|BAD89404.1| 893|Homo sapiens PMS1 nirs variant 7 pro... 33 1.6
AB102869-1|BAD89398.1| 667|Homo sapiens PMS1 nirs variant 1 pro... 33 1.6
Z95115-3|CAB62951.1| 211|Homo sapiens high-mobility group (nonh... 33 2.1
U80736-1|AAB91435.1| 331|Homo sapiens CAGF9 protein. 33 2.1
BT007176-1|AAP35840.1| 411|Homo sapiens SWI/SNF related, matrix... 32 2.8
BC063700-1|AAH63700.1| 411|Homo sapiens SWI/SNF related, matrix... 32 2.8
BC016665-1|AAH16665.1| 526|Homo sapiens thymocyte selection-ass... 32 2.8
BC011017-1|AAH11017.1| 411|Homo sapiens SWI/SNF related, matrix... 32 2.8
BC007082-1|AAH07082.1| 411|Homo sapiens SWI/SNF related, matrix... 32 2.8
AF035262-1|AAC04509.1| 411|Homo sapiens BAF57 protein. 32 2.8
AB018351-1|BAA34528.2| 530|Homo sapiens KIAA0808 protein protein. 32 2.8
M62810-1|AAA59849.1| 246|Homo sapiens mitochondrial transcripti... 32 3.6
CR407653-1|CAG28581.1| 246|Homo sapiens TFAM protein. 32 3.6
BT019659-1|AAV38465.1| 246|Homo sapiens transcription factor A,... 32 3.6
BT019658-1|AAV38464.1| 246|Homo sapiens transcription factor A,... 32 3.6
BC126366-1|AAI26367.1| 246|Homo sapiens transcription factor A,... 32 3.6
BC007636-1|AAH07636.1| 464|Homo sapiens Unknown (protein for MG... 32 3.6
AL121587-3|CAI21561.1| 464|Homo sapiens chromosome 20 open read... 32 3.6
AL034419-4|CAI42201.1| 464|Homo sapiens chromosome 20 open read... 32 3.6
AL353648-2|CAI15601.1| 162|Homo sapiens high-mobility group box... 31 4.8
BC033492-1|AAH33492.2| 753|Homo sapiens SRY (sex determining re... 31 6.4
AC007277-1|AAF19244.1| 191|Homo sapiens WUGSC:H_NH0244E06.1 pro... 31 6.4
AB022441-1|BAA37149.1| 501|Homo sapiens Sox30 protein typeII pr... 31 6.4
AB022083-1|BAA37146.1| 753|Homo sapiens SOX30 protein protein. 31 6.4
>BC103851-1|AAI03852.1| 130|Homo sapiens HMG4L protein protein.
Length = 130
Score = 41.9 bits (94), Expect = 0.003
Identities = 25/69 (36%), Positives = 33/69 (47%), Gaps = 6/69 (8%)
Frame = +3
Query: 306 NKPKRPLTPFXXXMSQMRPALLAKNPGISSXEAIAWTSKHWXQL-DME-----TXTQMAK 467
N PKRPL+ F S+ P + + NPGIS + + W L D E T K
Sbjct: 27 NAPKRPLSGFFLFCSEFCPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYVTKVAKLK 86
Query: 468 EYQKDXEDY 494
+Y+KD DY
Sbjct: 87 KYEKDVADY 95
>BC103850-1|AAI03851.1| 130|Homo sapiens HMG4L protein protein.
Length = 130
Score = 41.9 bits (94), Expect = 0.003
Identities = 25/69 (36%), Positives = 33/69 (47%), Gaps = 6/69 (8%)
Frame = +3
Query: 306 NKPKRPLTPFXXXMSQMRPALLAKNPGISSXEAIAWTSKHWXQL-DME-----TXTQMAK 467
N PKRPL+ F S+ P + + NPGIS + + W L D E T K
Sbjct: 27 NAPKRPLSGFFLFCSEFCPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYVTKVAKLK 86
Query: 468 EYQKDXEDY 494
+Y+KD DY
Sbjct: 87 KYEKDVADY 95
>BC103849-1|AAI03850.1| 130|Homo sapiens HMG4L protein protein.
Length = 130
Score = 41.9 bits (94), Expect = 0.003
Identities = 25/69 (36%), Positives = 33/69 (47%), Gaps = 6/69 (8%)
Frame = +3
Query: 306 NKPKRPLTPFXXXMSQMRPALLAKNPGISSXEAIAWTSKHWXQL-DME-----TXTQMAK 467
N PKRPL+ F S+ P + + NPGIS + + W L D E T K
Sbjct: 27 NAPKRPLSGFFLFCSEFCPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYVTKVAKLK 86
Query: 468 EYQKDXEDY 494
+Y+KD DY
Sbjct: 87 KYEKDVADY 95
>BT006716-1|AAP35362.1| 347|Homo sapiens high-mobility group 20A
protein.
Length = 347
Score = 41.1 bits (92), Expect = 0.006
Identities = 22/71 (30%), Positives = 30/71 (42%)
Frame = +3
Query: 306 NKPKRPLTPFXXXMSQMRPALLAKNPGISSXEAIAWTSKHWXQLDMETXTQMAKEYQKDX 485
N PK PLT + M++ R L AK P + E W +L E + E +D
Sbjct: 101 NAPKSPLTGYVRFMNERREQLRAKRPEVPFPEITRMLGNEWSKLPPEEKQRYLDEADRDK 160
Query: 486 EDYNKIKAXYE 518
E Y K Y+
Sbjct: 161 ERYMKELEQYQ 171
>BC021959-1|AAH21959.1| 347|Homo sapiens high-mobility group 20A
protein.
Length = 347
Score = 41.1 bits (92), Expect = 0.006
Identities = 22/71 (30%), Positives = 30/71 (42%)
Frame = +3
Query: 306 NKPKRPLTPFXXXMSQMRPALLAKNPGISSXEAIAWTSKHWXQLDMETXTQMAKEYQKDX 485
N PK PLT + M++ R L AK P + E W +L E + E +D
Sbjct: 101 NAPKSPLTGYVRFMNERREQLRAKRPEVPFPEITRMLGNEWSKLPPEEKQRYLDEADRDK 160
Query: 486 EDYNKIKAXYE 518
E Y K Y+
Sbjct: 161 ERYMKELEQYQ 171
>AL355737-1|CAB90816.1| 347|Homo sapiens HMG20A protein.
Length = 347
Score = 41.1 bits (92), Expect = 0.006
Identities = 22/71 (30%), Positives = 30/71 (42%)
Frame = +3
Query: 306 NKPKRPLTPFXXXMSQMRPALLAKNPGISSXEAIAWTSKHWXQLDMETXTQMAKEYQKDX 485
N PK PLT + M++ R L AK P + E W +L E + E +D
Sbjct: 101 NAPKSPLTGYVRFMNERREQLRAKRPEVPFPEITRMLGNEWSKLPPEEKQRYLDEADRDK 160
Query: 486 EDYNKIKAXYE 518
E Y K Y+
Sbjct: 161 ERYMKELEQYQ 171
>AK223100-1|BAD96820.1| 347|Homo sapiens high-mobility group 20A
variant protein.
Length = 347
Score = 41.1 bits (92), Expect = 0.006
Identities = 22/71 (30%), Positives = 30/71 (42%)
Frame = +3
Query: 306 NKPKRPLTPFXXXMSQMRPALLAKNPGISSXEAIAWTSKHWXQLDMETXTQMAKEYQKDX 485
N PK PLT + M++ R L AK P + E W +L E + E +D
Sbjct: 101 NAPKSPLTGYVRFMNERREQLRAKRPEVPFPEITRMLGNEWSKLPPEEKQRYLDEADRDK 160
Query: 486 EDYNKIKAXYE 518
E Y K Y+
Sbjct: 161 ERYMKELEQYQ 171
>AK001601-1|BAA91782.1| 347|Homo sapiens protein ( Homo sapiens
cDNA FLJ10739 fis, clone NT2RP3001472, weakly similar to
NONHISTONE CHROMOSOMAL PROTEIN 6A. ).
Length = 347
Score = 41.1 bits (92), Expect = 0.006
Identities = 22/71 (30%), Positives = 30/71 (42%)
Frame = +3
Query: 306 NKPKRPLTPFXXXMSQMRPALLAKNPGISSXEAIAWTSKHWXQLDMETXTQMAKEYQKDX 485
N PK PLT + M++ R L AK P + E W +L E + E +D
Sbjct: 101 NAPKSPLTGYVRFMNERREQLRAKRPEVPFPEITRMLGNEWSKLPPEEKQRYLDEADRDK 160
Query: 486 EDYNKIKAXYE 518
E Y K Y+
Sbjct: 161 ERYMKELEQYQ 171
>AF146222-1|AAF66706.1| 347|Homo sapiens HMG domain protein HMGX1
protein.
Length = 347
Score = 41.1 bits (92), Expect = 0.006
Identities = 22/71 (30%), Positives = 30/71 (42%)
Frame = +3
Query: 306 NKPKRPLTPFXXXMSQMRPALLAKNPGISSXEAIAWTSKHWXQLDMETXTQMAKEYQKDX 485
N PK PLT + M++ R L AK P + E W +L E + E +D
Sbjct: 101 NAPKSPLTGYVRFMNERREQLRAKRPEVPFPEITRMLGNEWSKLPPEEKQRYLDEADRDK 160
Query: 486 EDYNKIKAXYE 518
E Y K Y+
Sbjct: 161 ERYMKELEQYQ 171
>Y10043-1|CAA71143.1| 200|Homo sapiens high mobility group protein
2a protein.
Length = 200
Score = 40.7 bits (91), Expect = 0.008
Identities = 28/78 (35%), Positives = 39/78 (50%), Gaps = 7/78 (8%)
Frame = +3
Query: 306 NKPKRPLTPFXXXMSQMRPALLAKNPGISSXEAIAWTSKHWXQL-DMET---XTQMAK-- 467
N PKRP + F S+ RP + + NPGIS + + W L D E T+ AK
Sbjct: 91 NAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYITKAAKLK 150
Query: 468 -EYQKDXEDYNKIKAXYE 518
+Y+KD DY K K ++
Sbjct: 151 EKYEKDVADY-KSKGKFD 167
>BC070482-1|AAH70482.1| 200|Homo sapiens HMGB3 protein protein.
Length = 200
Score = 40.7 bits (91), Expect = 0.008
Identities = 28/78 (35%), Positives = 39/78 (50%), Gaps = 7/78 (8%)
Frame = +3
Query: 306 NKPKRPLTPFXXXMSQMRPALLAKNPGISSXEAIAWTSKHWXQL-DMET---XTQMAK-- 467
N PKRP + F S+ RP + + NPGIS + + W L D E T+ AK
Sbjct: 91 NAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYITKAAKLK 150
Query: 468 -EYQKDXEDYNKIKAXYE 518
+Y+KD DY K K ++
Sbjct: 151 EKYEKDVADY-KSKGKFD 167
>D63874-1|BAA09924.1| 215|Homo sapiens HMG-1 protein.
Length = 215
Score = 38.3 bits (85), Expect = 0.042
Identities = 20/70 (28%), Positives = 31/70 (44%)
Frame = +3
Query: 306 NKPKRPLTPFXXXMSQMRPALLAKNPGISSXEAIAWTSKHWXQLDMETXTQMAKEYQKDX 485
N PKRP + F S+ RP + ++PG+S + + W + K+ +K
Sbjct: 93 NAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAEKLK 152
Query: 486 EDYNKIKAXY 515
E Y K A Y
Sbjct: 153 EKYEKDIAAY 162
>M86737-1|AAA58660.1| 709|Homo sapiens high mobility group box
protein.
Length = 709
Score = 37.9 bits (84), Expect = 0.056
Identities = 18/76 (23%), Positives = 34/76 (44%)
Frame = +3
Query: 291 RGXACNKPKRPLTPFXXXMSQMRPALLAKNPGISSXEAIAWTSKHWXQLDMETXTQMAKE 470
+G N PKRP++ + ++ R + + +PGIS + + W + E + ++
Sbjct: 540 KGKDPNAPKRPMSAYMLWLNASREKIKSDHPGISITDLSKKAGEIWKGMSKEKKEEWDRK 599
Query: 471 YQKDXEDYNKIKAXYE 518
+ DY K YE
Sbjct: 600 AEDARRDYEKAMKEYE 615
>BC091486-1|AAH91486.1| 633|Homo sapiens SSRP1 protein protein.
Length = 633
Score = 37.9 bits (84), Expect = 0.056
Identities = 18/76 (23%), Positives = 34/76 (44%)
Frame = +3
Query: 291 RGXACNKPKRPLTPFXXXMSQMRPALLAKNPGISSXEAIAWTSKHWXQLDMETXTQMAKE 470
+G N PKRP++ + ++ R + + +PGIS + + W + E + ++
Sbjct: 540 KGKDPNAPKRPMSAYMLWLNASREKIKSDHPGISITDLSKKAGEIWKGMSKEKKEEWDRK 599
Query: 471 YQKDXEDYNKIKAXYE 518
+ DY K YE
Sbjct: 600 AEDARRDYEKAMKEYE 615
>BC005116-1|AAH05116.1| 709|Homo sapiens structure specific
recognition protein 1 protein.
Length = 709
Score = 37.9 bits (84), Expect = 0.056
Identities = 18/76 (23%), Positives = 34/76 (44%)
Frame = +3
Query: 291 RGXACNKPKRPLTPFXXXMSQMRPALLAKNPGISSXEAIAWTSKHWXQLDMETXTQMAKE 470
+G N PKRP++ + ++ R + + +PGIS + + W + E + ++
Sbjct: 540 KGKDPNAPKRPMSAYMLWLNASREKIKSDHPGISITDLSKKAGEIWKGMSKEKKEEWDRK 599
Query: 471 YQKDXEDYNKIKAXYE 518
+ DY K YE
Sbjct: 600 AEDARRDYEKAMKEYE 615
>AB208998-1|BAD92235.1| 176|Homo sapiens high-mobility group box 1
variant protein.
Length = 176
Score = 37.9 bits (84), Expect = 0.056
Identities = 18/68 (26%), Positives = 31/68 (45%)
Frame = +3
Query: 306 NKPKRPLTPFXXXMSQMRPALLAKNPGISSXEAIAWTSKHWXQLDMETXTQMAKEYQKDX 485
N PKRP + F S+ RP + ++PG+S + + W + K+ K
Sbjct: 95 NAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLK 154
Query: 486 EDYNKIKA 509
E Y K+++
Sbjct: 155 EKYEKVRS 162
>BC141844-1|AAI41845.1| 215|Homo sapiens high-mobility group box 1
protein.
Length = 215
Score = 37.5 bits (83), Expect = 0.073
Identities = 20/70 (28%), Positives = 30/70 (42%)
Frame = +3
Query: 306 NKPKRPLTPFXXXMSQMRPALLAKNPGISSXEAIAWTSKHWXQLDMETXTQMAKEYQKDX 485
N PKRP + F S+ RP + ++PG+S + + W + K+ K
Sbjct: 93 NAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQHYEKKAAKLK 152
Query: 486 EDYNKIKAXY 515
E Y K A Y
Sbjct: 153 EKYEKDIAAY 162
>X12597-1|CAA31110.1| 215|Homo sapiens protein ( Human mRNA for
high mobility group-1 protein (HMG-1). ).
Length = 215
Score = 37.1 bits (82), Expect = 0.097
Identities = 20/70 (28%), Positives = 30/70 (42%)
Frame = +3
Query: 306 NKPKRPLTPFXXXMSQMRPALLAKNPGISSXEAIAWTSKHWXQLDMETXTQMAKEYQKDX 485
N PKRP + F S+ RP + ++PG+S + + W + K+ K
Sbjct: 93 NAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLK 152
Query: 486 EDYNKIKAXY 515
E Y K A Y
Sbjct: 153 EKYEKDIAAY 162
>U51677-1|AAB08987.1| 215|Homo sapiens non-histone chromatin
protein HMG1 protein.
Length = 215
Score = 37.1 bits (82), Expect = 0.097
Identities = 20/70 (28%), Positives = 30/70 (42%)
Frame = +3
Query: 306 NKPKRPLTPFXXXMSQMRPALLAKNPGISSXEAIAWTSKHWXQLDMETXTQMAKEYQKDX 485
N PKRP + F S+ RP + ++PG+S + + W + K+ K
Sbjct: 93 NAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLK 152
Query: 486 EDYNKIKAXY 515
E Y K A Y
Sbjct: 153 EKYEKDIAAY 162
>EU012027-1|ABS29271.1| 215|Homo sapiens high-mobility group box 1
protein.
Length = 215
Score = 37.1 bits (82), Expect = 0.097
Identities = 20/70 (28%), Positives = 30/70 (42%)
Frame = +3
Query: 306 NKPKRPLTPFXXXMSQMRPALLAKNPGISSXEAIAWTSKHWXQLDMETXTQMAKEYQKDX 485
N PKRP + F S+ RP + ++PG+S + + W + K+ K
Sbjct: 93 NAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLK 152
Query: 486 EDYNKIKAXY 515
E Y K A Y
Sbjct: 153 EKYEKDIAAY 162
>EF157968-1|ABM47301.1| 215|Homo sapiens high mobility group box 1
protein protein.
Length = 215
Score = 37.1 bits (82), Expect = 0.097
Identities = 20/70 (28%), Positives = 30/70 (42%)
Frame = +3
Query: 306 NKPKRPLTPFXXXMSQMRPALLAKNPGISSXEAIAWTSKHWXQLDMETXTQMAKEYQKDX 485
N PKRP + F S+ RP + ++PG+S + + W + K+ K
Sbjct: 93 NAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLK 152
Query: 486 EDYNKIKAXY 515
E Y K A Y
Sbjct: 153 EKYEKDIAAY 162
>CR456863-1|CAG33144.1| 215|Homo sapiens HMGB1 protein.
Length = 215
Score = 37.1 bits (82), Expect = 0.097
Identities = 20/70 (28%), Positives = 30/70 (42%)
Frame = +3
Query: 306 NKPKRPLTPFXXXMSQMRPALLAKNPGISSXEAIAWTSKHWXQLDMETXTQMAKEYQKDX 485
N PKRP + F S+ RP + ++PG+S + + W + K+ K
Sbjct: 93 NAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLK 152
Query: 486 EDYNKIKAXY 515
E Y K A Y
Sbjct: 153 EKYEKDIAAY 162
>BT020159-1|AAV38961.1| 215|Homo sapiens high-mobility group box 1
protein.
Length = 215
Score = 37.1 bits (82), Expect = 0.097
Identities = 20/70 (28%), Positives = 30/70 (42%)
Frame = +3
Query: 306 NKPKRPLTPFXXXMSQMRPALLAKNPGISSXEAIAWTSKHWXQLDMETXTQMAKEYQKDX 485
N PKRP + F S+ RP + ++PG+S + + W + K+ K
Sbjct: 93 NAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLK 152
Query: 486 EDYNKIKAXY 515
E Y K A Y
Sbjct: 153 EKYEKDIAAY 162
>BT006940-1|AAP35586.1| 215|Homo sapiens high-mobility group box 1
protein.
Length = 215
Score = 37.1 bits (82), Expect = 0.097
Identities = 20/70 (28%), Positives = 30/70 (42%)
Frame = +3
Query: 306 NKPKRPLTPFXXXMSQMRPALLAKNPGISSXEAIAWTSKHWXQLDMETXTQMAKEYQKDX 485
N PKRP + F S+ RP + ++PG+S + + W + K+ K
Sbjct: 93 NAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLK 152
Query: 486 EDYNKIKAXY 515
E Y K A Y
Sbjct: 153 EKYEKDIAAY 162
>BC067732-1|AAH67732.1| 215|Homo sapiens high-mobility group box 1
protein.
Length = 215
Score = 37.1 bits (82), Expect = 0.097
Identities = 20/70 (28%), Positives = 30/70 (42%)
Frame = +3
Query: 306 NKPKRPLTPFXXXMSQMRPALLAKNPGISSXEAIAWTSKHWXQLDMETXTQMAKEYQKDX 485
N PKRP + F S+ RP + ++PG+S + + W + K+ K
Sbjct: 93 NAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLK 152
Query: 486 EDYNKIKAXY 515
E Y K A Y
Sbjct: 153 EKYEKDIAAY 162
>BC066889-1|AAH66889.1| 215|Homo sapiens high-mobility group box 1
protein.
Length = 215
Score = 37.1 bits (82), Expect = 0.097
Identities = 20/70 (28%), Positives = 30/70 (42%)
Frame = +3
Query: 306 NKPKRPLTPFXXXMSQMRPALLAKNPGISSXEAIAWTSKHWXQLDMETXTQMAKEYQKDX 485
N PKRP + F S+ RP + ++PG+S + + W + K+ K
Sbjct: 93 NAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLK 152
Query: 486 EDYNKIKAXY 515
E Y K A Y
Sbjct: 153 EKYEKDIAAY 162
>BC030981-1|AAH30981.1| 215|Homo sapiens high-mobility group box 1
protein.
Length = 215
Score = 37.1 bits (82), Expect = 0.097
Identities = 20/70 (28%), Positives = 30/70 (42%)
Frame = +3
Query: 306 NKPKRPLTPFXXXMSQMRPALLAKNPGISSXEAIAWTSKHWXQLDMETXTQMAKEYQKDX 485
N PKRP + F S+ RP + ++PG+S + + W + K+ K
Sbjct: 93 NAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLK 152
Query: 486 EDYNKIKAXY 515
E Y K A Y
Sbjct: 153 EKYEKDIAAY 162
>BC003378-1|AAH03378.1| 215|Homo sapiens high-mobility group box 1
protein.
Length = 215
Score = 37.1 bits (82), Expect = 0.097
Identities = 20/70 (28%), Positives = 30/70 (42%)
Frame = +3
Query: 306 NKPKRPLTPFXXXMSQMRPALLAKNPGISSXEAIAWTSKHWXQLDMETXTQMAKEYQKDX 485
N PKRP + F S+ RP + ++PG+S + + W + K+ K
Sbjct: 93 NAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLK 152
Query: 486 EDYNKIKAXY 515
E Y K A Y
Sbjct: 153 EKYEKDIAAY 162
>AY377859-1|AAQ91389.1| 215|Homo sapiens high mobility group
protein 1 protein.
Length = 215
Score = 37.1 bits (82), Expect = 0.097
Identities = 20/70 (28%), Positives = 30/70 (42%)
Frame = +3
Query: 306 NKPKRPLTPFXXXMSQMRPALLAKNPGISSXEAIAWTSKHWXQLDMETXTQMAKEYQKDX 485
N PKRP + F S+ RP + ++PG+S + + W + K+ K
Sbjct: 93 NAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLK 152
Query: 486 EDYNKIKAXY 515
E Y K A Y
Sbjct: 153 EKYEKDIAAY 162
>AL353648-1|CAI15600.1| 215|Homo sapiens high-mobility group box 1
protein.
Length = 215
Score = 37.1 bits (82), Expect = 0.097
Identities = 20/70 (28%), Positives = 30/70 (42%)
Frame = +3
Query: 306 NKPKRPLTPFXXXMSQMRPALLAKNPGISSXEAIAWTSKHWXQLDMETXTQMAKEYQKDX 485
N PKRP + F S+ RP + ++PG+S + + W + K+ K
Sbjct: 93 NAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLK 152
Query: 486 EDYNKIKAXY 515
E Y K A Y
Sbjct: 153 EKYEKDIAAY 162
>Z17240-1|CAA78938.1| 186|Homo sapiens HMG2B protein.
Length = 186
Score = 36.3 bits (80), Expect = 0.17
Identities = 19/70 (27%), Positives = 32/70 (45%)
Frame = +3
Query: 306 NKPKRPLTPFXXXMSQMRPALLAKNPGISSXEAIAWTSKHWXQLDMETXTQMAKEYQKDX 485
N PKRP + F S+ RP + +++PG+S + + W + + ++ K
Sbjct: 70 NAPKRPPSAFFLFCSEHRPKIKSEHPGLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLK 129
Query: 486 EDYNKIKAXY 515
E Y K A Y
Sbjct: 130 EKYEKDIAAY 139
>X62534-1|CAA44395.1| 209|Homo sapiens HMG-2 protein.
Length = 209
Score = 36.3 bits (80), Expect = 0.17
Identities = 19/70 (27%), Positives = 32/70 (45%)
Frame = +3
Query: 306 NKPKRPLTPFXXXMSQMRPALLAKNPGISSXEAIAWTSKHWXQLDMETXTQMAKEYQKDX 485
N PKRP + F S+ RP + +++PG+S + + W + + ++ K
Sbjct: 93 NAPKRPPSAFFLFCSEHRPKIKSEHPGLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLK 152
Query: 486 EDYNKIKAXY 515
E Y K A Y
Sbjct: 153 EKYEKDIAAY 162
>M83665-1|AAA58659.1| 209|Homo sapiens high mobility group 2
protein protein.
Length = 209
Score = 36.3 bits (80), Expect = 0.17
Identities = 19/70 (27%), Positives = 32/70 (45%)
Frame = +3
Query: 306 NKPKRPLTPFXXXMSQMRPALLAKNPGISSXEAIAWTSKHWXQLDMETXTQMAKEYQKDX 485
N PKRP + F S+ RP + +++PG+S + + W + + ++ K
Sbjct: 93 NAPKRPPSAFFLFCSEHRPKIKSEHPGLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLK 152
Query: 486 EDYNKIKAXY 515
E Y K A Y
Sbjct: 153 EKYEKDIAAY 162
>BT019783-1|AAV38586.1| 208|Homo sapiens high-mobility group box 2
protein.
Length = 208
Score = 36.3 bits (80), Expect = 0.17
Identities = 19/70 (27%), Positives = 32/70 (45%)
Frame = +3
Query: 306 NKPKRPLTPFXXXMSQMRPALLAKNPGISSXEAIAWTSKHWXQLDMETXTQMAKEYQKDX 485
N PKRP + F S+ RP + +++PG+S + + W + + ++ K
Sbjct: 93 NAPKRPPSAFFLFCSEHRPKIKSEHPGLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLK 152
Query: 486 EDYNKIKAXY 515
E Y K A Y
Sbjct: 153 EKYEKDIAAY 162
>BT019782-1|AAV38585.1| 209|Homo sapiens high-mobility group box 2
protein.
Length = 209
Score = 36.3 bits (80), Expect = 0.17
Identities = 19/70 (27%), Positives = 32/70 (45%)
Frame = +3
Query: 306 NKPKRPLTPFXXXMSQMRPALLAKNPGISSXEAIAWTSKHWXQLDMETXTQMAKEYQKDX 485
N PKRP + F S+ RP + +++PG+S + + W + + ++ K
Sbjct: 93 NAPKRPPSAFFLFCSEHRPKIKSEHPGLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLK 152
Query: 486 EDYNKIKAXY 515
E Y K A Y
Sbjct: 153 EKYEKDIAAY 162
>BC100019-1|AAI00020.1| 209|Homo sapiens HMGB2 protein protein.
Length = 209
Score = 36.3 bits (80), Expect = 0.17
Identities = 19/70 (27%), Positives = 32/70 (45%)
Frame = +3
Query: 306 NKPKRPLTPFXXXMSQMRPALLAKNPGISSXEAIAWTSKHWXQLDMETXTQMAKEYQKDX 485
N PKRP + F S+ RP + +++PG+S + + W + + ++ K
Sbjct: 93 NAPKRPPSAFFLFCSEHRPKIKSEHPGLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLK 152
Query: 486 EDYNKIKAXY 515
E Y K A Y
Sbjct: 153 EKYEKDIAAY 162
>BC001063-1|AAH01063.1| 209|Homo sapiens high-mobility group box 2
protein.
Length = 209
Score = 36.3 bits (80), Expect = 0.17
Identities = 19/70 (27%), Positives = 32/70 (45%)
Frame = +3
Query: 306 NKPKRPLTPFXXXMSQMRPALLAKNPGISSXEAIAWTSKHWXQLDMETXTQMAKEYQKDX 485
N PKRP + F S+ RP + +++PG+S + + W + + ++ K
Sbjct: 93 NAPKRPPSAFFLFCSEHRPKIKSEHPGLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLK 152
Query: 486 EDYNKIKAXY 515
E Y K A Y
Sbjct: 153 EKYEKDIAAY 162
>AL353648-3|CAI15603.1| 158|Homo sapiens high-mobility group box 1
protein.
Length = 158
Score = 35.5 bits (78), Expect = 0.30
Identities = 18/65 (27%), Positives = 28/65 (43%)
Frame = +3
Query: 306 NKPKRPLTPFXXXMSQMRPALLAKNPGISSXEAIAWTSKHWXQLDMETXTQMAKEYQKDX 485
N PKRP + F S+ RP + ++PG+S + + W + K+ K
Sbjct: 93 NAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLK 152
Query: 486 EDYNK 500
E Y K
Sbjct: 153 EKYEK 157
>L79988-1|AAL77438.1| 403|Homo sapiens nuclear autoantigen protein.
Length = 403
Score = 35.1 bits (77), Expect = 0.39
Identities = 20/70 (28%), Positives = 29/70 (41%)
Frame = +3
Query: 306 NKPKRPLTPFXXXMSQMRPALLAKNPGISSXEAIAWTSKHWXQLDMETXTQMAKEYQKDX 485
N PKRP F S+ RP + ++PG+S + + + W K+ K
Sbjct: 291 NAPKRPPLAFFLFCSEYRPKIKGEHPGLSIDDVVKKLAGMWNNTAAADKQFYEKKAAKLK 350
Query: 486 EDYNKIKAXY 515
E Y K A Y
Sbjct: 351 EKYKKDIAAY 360
>AF076675-2|AAF39781.1| 181|Homo sapiens SP100-HMG protein.
Length = 181
Score = 35.1 bits (77), Expect = 0.39
Identities = 20/70 (28%), Positives = 29/70 (41%)
Frame = +3
Query: 306 NKPKRPLTPFXXXMSQMRPALLAKNPGISSXEAIAWTSKHWXQLDMETXTQMAKEYQKDX 485
N PKRP F S+ RP + ++PG+S + + + W K+ K
Sbjct: 69 NAPKRPPLAFFLFCSEYRPKIKGEHPGLSIDDVVKKLAGMWNNTAAADKQFYEKKAAKLK 128
Query: 486 EDYNKIKAXY 515
E Y K A Y
Sbjct: 129 EKYKKDIAAY 138
>AF056322-1|AAC39790.1| 879|Homo sapiens SP100-HMG nuclear
autoantigen protein.
Length = 879
Score = 35.1 bits (77), Expect = 0.39
Identities = 20/70 (28%), Positives = 29/70 (41%)
Frame = +3
Query: 306 NKPKRPLTPFXXXMSQMRPALLAKNPGISSXEAIAWTSKHWXQLDMETXTQMAKEYQKDX 485
N PKRP F S+ RP + ++PG+S + + + W K+ K
Sbjct: 767 NAPKRPPLAFFLFCSEYRPKIKGEHPGLSIDDVVKKLAGMWNNTAAADKQFYEKKAAKLK 826
Query: 486 EDYNKIKAXY 515
E Y K A Y
Sbjct: 827 EKYKKDIAAY 836
>AC010149-1|AAY14879.1| 843|Homo sapiens unknown protein.
Length = 843
Score = 35.1 bits (77), Expect = 0.39
Identities = 20/70 (28%), Positives = 29/70 (41%)
Frame = +3
Query: 306 NKPKRPLTPFXXXMSQMRPALLAKNPGISSXEAIAWTSKHWXQLDMETXTQMAKEYQKDX 485
N PKRP F S+ RP + ++PG+S + + + W K+ K
Sbjct: 731 NAPKRPPLAFFLFCSEYRPKIKGEHPGLSIDDVVKKLAGMWNNTAAADKQFYEKKAAKLK 790
Query: 486 EDYNKIKAXY 515
E Y K A Y
Sbjct: 791 EKYKKDIAAY 800
>X56687-1|CAA40016.1| 727|Homo sapiens autoantigen NOR-90 protein.
Length = 727
Score = 33.9 bits (74), Expect = 0.90
Identities = 14/68 (20%), Positives = 35/68 (51%)
Frame = +3
Query: 312 PKRPLTPFXXXMSQMRPALLAKNPGISSXEAIAWTSKHWXQLDMETXTQMAKEYQKDXED 491
PK+PLTP+ + R +P +S+ + SK + +L + + +++Q++ ++
Sbjct: 112 PKKPLTPYFRFFMEKRAKYAKLHPEMSNLDLTKILSKKYKELPEKKKMKYIQDFQREKQE 171
Query: 492 YNKIKAXY 515
+ + A +
Sbjct: 172 FERNLARF 179
>X53461-1|CAA37548.1| 764|Homo sapiens protein ( Human mRNA for
upstream binding factor (hUBF). ).
Length = 764
Score = 33.9 bits (74), Expect = 0.90
Identities = 14/68 (20%), Positives = 35/68 (51%)
Frame = +3
Query: 312 PKRPLTPFXXXMSQMRPALLAKNPGISSXEAIAWTSKHWXQLDMETXTQMAKEYQKDXED 491
PK+PLTP+ + R +P +S+ + SK + +L + + +++Q++ ++
Sbjct: 112 PKKPLTPYFRFFMEKRAKYAKLHPEMSNLDLTKILSKKYKELPEKKKMKYIQDFQREKQE 171
Query: 492 YNKIKAXY 515
+ + A +
Sbjct: 172 FERNLARF 179
>X53390-1|CAA37469.1| 764|Homo sapiens protein ( Human mRNA for
upstream binding factor (hUBF). ).
Length = 764
Score = 33.9 bits (74), Expect = 0.90
Identities = 14/68 (20%), Positives = 35/68 (51%)
Frame = +3
Query: 312 PKRPLTPFXXXMSQMRPALLAKNPGISSXEAIAWTSKHWXQLDMETXTQMAKEYQKDXED 491
PK+PLTP+ + R +P +S+ + SK + +L + + +++Q++ ++
Sbjct: 112 PKKPLTPYFRFFMEKRAKYAKLHPEMSNLDLTKILSKKYKELPEKKKMKYIQDFQREKQE 171
Query: 492 YNKIKAXY 515
+ + A +
Sbjct: 172 FERNLARF 179
>BC042297-1|AAH42297.1| 727|Homo sapiens upstream binding
transcription factor, RNA polymerase I protein.
Length = 727
Score = 33.9 bits (74), Expect = 0.90
Identities = 14/68 (20%), Positives = 35/68 (51%)
Frame = +3
Query: 312 PKRPLTPFXXXMSQMRPALLAKNPGISSXEAIAWTSKHWXQLDMETXTQMAKEYQKDXED 491
PK+PLTP+ + R +P +S+ + SK + +L + + +++Q++ ++
Sbjct: 112 PKKPLTPYFRFFMEKRAKYAKLHPEMSNLDLTKILSKKYKELPEKKKMKYIQDFQREKQE 171
Query: 492 YNKIKAXY 515
+ + A +
Sbjct: 172 FERNLARF 179
>BC031423-1|AAH31423.1| 313|Homo sapiens UBTF protein protein.
Length = 313
Score = 33.9 bits (74), Expect = 0.90
Identities = 14/68 (20%), Positives = 35/68 (51%)
Frame = +3
Query: 312 PKRPLTPFXXXMSQMRPALLAKNPGISSXEAIAWTSKHWXQLDMETXTQMAKEYQKDXED 491
PK+PLTP+ + R +P +S+ + SK + +L + + +++Q++ ++
Sbjct: 112 PKKPLTPYFRFFMEKRAKYAKLHPEMSNLDLTKILSKKYKELPEKKKMKYIQDFQREKQE 171
Query: 492 YNKIKAXY 515
+ + A +
Sbjct: 172 FERNLARF 179
>U13695-1|AAA63922.1| 932|Homo sapiens hPMS1 protein.
Length = 932
Score = 33.1 bits (72), Expect = 1.6
Identities = 17/61 (27%), Positives = 27/61 (44%)
Frame = +3
Query: 315 KRPLTPFXXXMSQMRPALLAKNPGISSXEAIAWTSKHWXQLDMETXTQMAKEYQKDXEDY 494
K+P++ + RP L +NP S +A + W L E + ++ KD E Y
Sbjct: 572 KKPMSASALFVQDHRPQFLIENPKTSLEDATLQIEELWKTLSEEEKLKYEEKATKDLERY 631
Query: 495 N 497
N
Sbjct: 632 N 632
>L08048-1|AAA64970.1| 216|Homo sapiens HMG-1 protein.
Length = 216
Score = 33.1 bits (72), Expect = 1.6
Identities = 19/70 (27%), Positives = 29/70 (41%)
Frame = +3
Query: 306 NKPKRPLTPFXXXMSQMRPALLAKNPGISSXEAIAWTSKHWXQLDMETXTQMAKEYQKDX 485
N PKR + F S+ RP + ++PG+S + + W + K+ K
Sbjct: 93 NAPKRLPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLK 152
Query: 486 EDYNKIKAXY 515
E Y K A Y
Sbjct: 153 EKYEKDIAAY 162
>BC096332-1|AAH96332.1| 920|Homo sapiens PMS1 protein protein.
Length = 920
Score = 33.1 bits (72), Expect = 1.6
Identities = 17/61 (27%), Positives = 27/61 (44%)
Frame = +3
Query: 315 KRPLTPFXXXMSQMRPALLAKNPGISSXEAIAWTSKHWXQLDMETXTQMAKEYQKDXEDY 494
K+P++ + RP L +NP S +A + W L E + ++ KD E Y
Sbjct: 572 KKPMSASALFVQDHRPQFLIENPKTSLEDATLQIEELWKTLSEEEKLKYEEKATKDLERY 631
Query: 495 N 497
N
Sbjct: 632 N 632
>BC096330-1|AAH96330.1| 920|Homo sapiens PMS1 protein protein.
Length = 920
Score = 33.1 bits (72), Expect = 1.6
Identities = 17/61 (27%), Positives = 27/61 (44%)
Frame = +3
Query: 315 KRPLTPFXXXMSQMRPALLAKNPGISSXEAIAWTSKHWXQLDMETXTQMAKEYQKDXEDY 494
K+P++ + RP L +NP S +A + W L E + ++ KD E Y
Sbjct: 572 KKPMSASALFVQDHRPQFLIENPKTSLEDATLQIEELWKTLSEEEKLKYEEKATKDLERY 631
Query: 495 N 497
N
Sbjct: 632 N 632
>AY540751-1|ABB04020.1| 659|Homo sapiens rhabdomyosarcoma antigen
MU-RMS-40.10E protein.
Length = 659
Score = 33.1 bits (72), Expect = 1.6
Identities = 17/61 (27%), Positives = 27/61 (44%)
Frame = +3
Query: 315 KRPLTPFXXXMSQMRPALLAKNPGISSXEAIAWTSKHWXQLDMETXTQMAKEYQKDXEDY 494
K+P++ + RP L +NP S +A + W L E + ++ KD E Y
Sbjct: 533 KKPMSASALFVQDHRPQFLIENPKTSLEDATLQIEELWKTLSEEEKLKYEEKATKDLERY 592
Query: 495 N 497
N
Sbjct: 593 N 593
>AY540750-1|ABB04019.1| 584|Homo sapiens rhabdomyosarcoma antigen
MU-RMS-40.10B protein.
Length = 584
Score = 33.1 bits (72), Expect = 1.6
Identities = 17/61 (27%), Positives = 27/61 (44%)
Frame = +3
Query: 315 KRPLTPFXXXMSQMRPALLAKNPGISSXEAIAWTSKHWXQLDMETXTQMAKEYQKDXEDY 494
K+P++ + RP L +NP S +A + W L E + ++ KD E Y
Sbjct: 411 KKPMSASALFVQDHRPQFLIENPKTSLEDATLQIEELWKTLSEEEKLKYEEKATKDLERY 470
Query: 495 N 497
N
Sbjct: 471 N 471
>AY267352-1|AAO89079.1| 932|Homo sapiens PMS1 postmeiotic
segregation increased 1 (S. cerevisiae) protein.
Length = 932
Score = 33.1 bits (72), Expect = 1.6
Identities = 17/61 (27%), Positives = 27/61 (44%)
Frame = +3
Query: 315 KRPLTPFXXXMSQMRPALLAKNPGISSXEAIAWTSKHWXQLDMETXTQMAKEYQKDXEDY 494
K+P++ + RP L +NP S +A + W L E + ++ KD E Y
Sbjct: 572 KKPMSASALFVQDHRPQFLIENPKTSLEDATLQIEELWKTLSEEEKLKYEEKATKDLERY 631
Query: 495 N 497
N
Sbjct: 632 N 632
>AB102875-1|BAD89404.1| 893|Homo sapiens PMS1 nirs variant 7
protein.
Length = 893
Score = 33.1 bits (72), Expect = 1.6
Identities = 17/61 (27%), Positives = 27/61 (44%)
Frame = +3
Query: 315 KRPLTPFXXXMSQMRPALLAKNPGISSXEAIAWTSKHWXQLDMETXTQMAKEYQKDXEDY 494
K+P++ + RP L +NP S +A + W L E + ++ KD E Y
Sbjct: 533 KKPMSASALFVQDHRPQFLIENPKTSLEDATLQIEELWKTLSEEEKLKYEEKATKDLERY 592
Query: 495 N 497
N
Sbjct: 593 N 593
>AB102869-1|BAD89398.1| 667|Homo sapiens PMS1 nirs variant 1
protein.
Length = 667
Score = 33.1 bits (72), Expect = 1.6
Identities = 17/61 (27%), Positives = 27/61 (44%)
Frame = +3
Query: 315 KRPLTPFXXXMSQMRPALLAKNPGISSXEAIAWTSKHWXQLDMETXTQMAKEYQKDXEDY 494
K+P++ + RP L +NP S +A + W L E + ++ KD E Y
Sbjct: 533 KKPMSASALFVQDHRPQFLIENPKTSLEDATLQIEELWKTLSEEEKLKYEEKATKDLERY 592
Query: 495 N 497
N
Sbjct: 593 N 593
>Z95115-3|CAB62951.1| 211|Homo sapiens high-mobility group
(nonhistone chromosomal) protein 1-like 10 protein.
Length = 211
Score = 32.7 bits (71), Expect = 2.1
Identities = 19/70 (27%), Positives = 28/70 (40%)
Frame = +3
Query: 306 NKPKRPLTPFXXXMSQMRPALLAKNPGISSXEAIAWTSKHWXQLDMETXTQMAKEYQKDX 485
N PKR + F S RP + ++PG+S + + W + K+ K
Sbjct: 93 NAPKRTPSAFFLFCSAYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLK 152
Query: 486 EDYNKIKAXY 515
E Y K A Y
Sbjct: 153 EKYEKDIAAY 162
>U80736-1|AAB91435.1| 331|Homo sapiens CAGF9 protein.
Length = 331
Score = 32.7 bits (71), Expect = 2.1
Identities = 16/74 (21%), Positives = 32/74 (43%)
Frame = +3
Query: 306 NKPKRPLTPFXXXMSQMRPALLAKNPGISSXEAIAWTSKHWXQLDMETXTQMAKEYQKDX 485
N+P++P++ + + A+ +NP + E + W L E ++ +
Sbjct: 8 NEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEAAK 67
Query: 486 EDYNKIKAXYETSL 527
++Y K A Y SL
Sbjct: 68 KEYLKALAAYRASL 81
>BT007176-1|AAP35840.1| 411|Homo sapiens SWI/SNF related, matrix
associated, actin dependent regulator of chromatin, sub
protein.
Length = 411
Score = 32.3 bits (70), Expect = 2.8
Identities = 17/71 (23%), Positives = 28/71 (39%)
Frame = +3
Query: 312 PKRPLTPFXXXMSQMRPALLAKNPGISSXEAIAWTSKHWXQLDMETXTQMAKEYQKDXED 491
P +PL P+ ++ + A NP + E W L E + EY+ + +
Sbjct: 66 PDKPLMPYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQEYLNEYEAEKIE 125
Query: 492 YNKIKAXYETS 524
YN+ Y S
Sbjct: 126 YNESMKAYHNS 136
>BC063700-1|AAH63700.1| 411|Homo sapiens SWI/SNF related, matrix
associated, actin dependent regulator of chromatin, sub
protein.
Length = 411
Score = 32.3 bits (70), Expect = 2.8
Identities = 17/71 (23%), Positives = 28/71 (39%)
Frame = +3
Query: 312 PKRPLTPFXXXMSQMRPALLAKNPGISSXEAIAWTSKHWXQLDMETXTQMAKEYQKDXED 491
P +PL P+ ++ + A NP + E W L E + EY+ + +
Sbjct: 66 PDKPLMPYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQEYLNEYEAEKIE 125
Query: 492 YNKIKAXYETS 524
YN+ Y S
Sbjct: 126 YNESMKAYHNS 136
>BC016665-1|AAH16665.1| 526|Homo sapiens thymocyte
selection-associated high mobility group box protein.
Length = 526
Score = 32.3 bits (70), Expect = 2.8
Identities = 17/74 (22%), Positives = 32/74 (43%)
Frame = +3
Query: 306 NKPKRPLTPFXXXMSQMRPALLAKNPGISSXEAIAWTSKHWXQLDMETXTQMAKEYQKDX 485
N+P++P++ + + A+ +NP + E + W L E K+ +
Sbjct: 259 NEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDGLGEEQKQVYKKKTEAAK 318
Query: 486 EDYNKIKAXYETSL 527
++Y K A Y SL
Sbjct: 319 KEYLKQLAAYRASL 332
>BC011017-1|AAH11017.1| 411|Homo sapiens SWI/SNF related, matrix
associated, actin dependent regulator of chromatin, sub
protein.
Length = 411
Score = 32.3 bits (70), Expect = 2.8
Identities = 17/71 (23%), Positives = 28/71 (39%)
Frame = +3
Query: 312 PKRPLTPFXXXMSQMRPALLAKNPGISSXEAIAWTSKHWXQLDMETXTQMAKEYQKDXED 491
P +PL P+ ++ + A NP + E W L E + EY+ + +
Sbjct: 66 PDKPLMPYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQEYLNEYEAEKIE 125
Query: 492 YNKIKAXYETS 524
YN+ Y S
Sbjct: 126 YNESMKAYHNS 136
>BC007082-1|AAH07082.1| 411|Homo sapiens SWI/SNF related, matrix
associated, actin dependent regulator of chromatin, sub
protein.
Length = 411
Score = 32.3 bits (70), Expect = 2.8
Identities = 17/71 (23%), Positives = 28/71 (39%)
Frame = +3
Query: 312 PKRPLTPFXXXMSQMRPALLAKNPGISSXEAIAWTSKHWXQLDMETXTQMAKEYQKDXED 491
P +PL P+ ++ + A NP + E W L E + EY+ + +
Sbjct: 66 PDKPLMPYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQEYLNEYEAEKIE 125
Query: 492 YNKIKAXYETS 524
YN+ Y S
Sbjct: 126 YNESMKAYHNS 136
>AF035262-1|AAC04509.1| 411|Homo sapiens BAF57 protein.
Length = 411
Score = 32.3 bits (70), Expect = 2.8
Identities = 17/71 (23%), Positives = 28/71 (39%)
Frame = +3
Query: 312 PKRPLTPFXXXMSQMRPALLAKNPGISSXEAIAWTSKHWXQLDMETXTQMAKEYQKDXED 491
P +PL P+ ++ + A NP + E W L E + EY+ + +
Sbjct: 66 PDKPLMPYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQEYLNEYEAEKIE 125
Query: 492 YNKIKAXYETS 524
YN+ Y S
Sbjct: 126 YNESMKAYHNS 136
>AB018351-1|BAA34528.2| 530|Homo sapiens KIAA0808 protein protein.
Length = 530
Score = 32.3 bits (70), Expect = 2.8
Identities = 17/74 (22%), Positives = 32/74 (43%)
Frame = +3
Query: 306 NKPKRPLTPFXXXMSQMRPALLAKNPGISSXEAIAWTSKHWXQLDMETXTQMAKEYQKDX 485
N+P++P++ + + A+ +NP + E + W L E K+ +
Sbjct: 263 NEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDGLGEEQKQVYKKKTEAAK 322
Query: 486 EDYNKIKAXYETSL 527
++Y K A Y SL
Sbjct: 323 KEYLKQLAAYRASL 336
>M62810-1|AAA59849.1| 246|Homo sapiens mitochondrial transcription
factor 1 protein.
Length = 246
Score = 31.9 bits (69), Expect = 3.6
Identities = 15/73 (20%), Positives = 32/73 (43%)
Frame = +3
Query: 312 PKRPLTPFXXXMSQMRPALLAKNPGISSXEAIAWTSKHWXQLDMETXTQMAKEYQKDXED 491
PK+P++ + + P A+NP + E I ++ W +L Y+ + +
Sbjct: 50 PKKPVSSYLRFSKEQLPIFKAQNPDAKTTELIRRIAQRWRELPDSKKKIYQDAYRAEWQV 109
Query: 492 YNKIKAXYETSLT 530
Y + + ++ LT
Sbjct: 110 YKEEISRFKEQLT 122
>CR407653-1|CAG28581.1| 246|Homo sapiens TFAM protein.
Length = 246
Score = 31.9 bits (69), Expect = 3.6
Identities = 15/73 (20%), Positives = 32/73 (43%)
Frame = +3
Query: 312 PKRPLTPFXXXMSQMRPALLAKNPGISSXEAIAWTSKHWXQLDMETXTQMAKEYQKDXED 491
PK+P++ + + P A+NP + E I ++ W +L Y+ + +
Sbjct: 50 PKKPVSSYLRFSKEQLPIFKAQNPDAKTTELIRRIAQRWRELPDSKKKIYQDAYRAEWQV 109
Query: 492 YNKIKAXYETSLT 530
Y + + ++ LT
Sbjct: 110 YKEEISRFKEQLT 122
>BT019659-1|AAV38465.1| 246|Homo sapiens transcription factor A,
mitochondrial protein.
Length = 246
Score = 31.9 bits (69), Expect = 3.6
Identities = 15/73 (20%), Positives = 32/73 (43%)
Frame = +3
Query: 312 PKRPLTPFXXXMSQMRPALLAKNPGISSXEAIAWTSKHWXQLDMETXTQMAKEYQKDXED 491
PK+P++ + + P A+NP + E I ++ W +L Y+ + +
Sbjct: 50 PKKPVSSYLRFSKEQLPIFKAQNPDAKTTELIRRIAQRWRELPDSKKKIYQDAYRAEWQV 109
Query: 492 YNKIKAXYETSLT 530
Y + + ++ LT
Sbjct: 110 YKEEISRFKEQLT 122
>BT019658-1|AAV38464.1| 246|Homo sapiens transcription factor A,
mitochondrial protein.
Length = 246
Score = 31.9 bits (69), Expect = 3.6
Identities = 15/73 (20%), Positives = 32/73 (43%)
Frame = +3
Query: 312 PKRPLTPFXXXMSQMRPALLAKNPGISSXEAIAWTSKHWXQLDMETXTQMAKEYQKDXED 491
PK+P++ + + P A+NP + E I ++ W +L Y+ + +
Sbjct: 50 PKKPVSSYLRFSKEQLPIFKAQNPDAKTTELIRRIAQRWRELPDSKKKIYQDAYRAEWQV 109
Query: 492 YNKIKAXYETSLT 530
Y + + ++ LT
Sbjct: 110 YKEEISRFKEQLT 122
>BC126366-1|AAI26367.1| 246|Homo sapiens transcription factor A,
mitochondrial protein.
Length = 246
Score = 31.9 bits (69), Expect = 3.6
Identities = 15/73 (20%), Positives = 32/73 (43%)
Frame = +3
Query: 312 PKRPLTPFXXXMSQMRPALLAKNPGISSXEAIAWTSKHWXQLDMETXTQMAKEYQKDXED 491
PK+P++ + + P A+NP + E I ++ W +L Y+ + +
Sbjct: 50 PKKPVSSYLRFSKEQLPIFKAQNPDAKTTELIRRIAQRWRELPDSKKKIYQDAYRAEWQV 109
Query: 492 YNKIKAXYETSLT 530
Y + + ++ LT
Sbjct: 110 YKEEISRFKEQLT 122
>BC007636-1|AAH07636.1| 464|Homo sapiens Unknown (protein for
MGC:15880) protein.
Length = 464
Score = 31.9 bits (69), Expect = 3.6
Identities = 15/74 (20%), Positives = 32/74 (43%)
Frame = +3
Query: 306 NKPKRPLTPFXXXMSQMRPALLAKNPGISSXEAIAWTSKHWXQLDMETXTQMAKEYQKDX 485
N+P++P++ + + A+ +NP + + + W L E ++ +
Sbjct: 202 NEPQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVASMWDSLGEEQKQAYKRKTEAAK 261
Query: 486 EDYNKIKAXYETSL 527
++Y K A Y SL
Sbjct: 262 KEYLKALAAYRASL 275
>AL121587-3|CAI21561.1| 464|Homo sapiens chromosome 20 open reading
frame 100 protein.
Length = 464
Score = 31.9 bits (69), Expect = 3.6
Identities = 15/74 (20%), Positives = 32/74 (43%)
Frame = +3
Query: 306 NKPKRPLTPFXXXMSQMRPALLAKNPGISSXEAIAWTSKHWXQLDMETXTQMAKEYQKDX 485
N+P++P++ + + A+ +NP + + + W L E ++ +
Sbjct: 202 NEPQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVASMWDSLGEEQKQAYKRKTEAAK 261
Query: 486 EDYNKIKAXYETSL 527
++Y K A Y SL
Sbjct: 262 KEYLKALAAYRASL 275
>AL034419-4|CAI42201.1| 464|Homo sapiens chromosome 20 open reading
frame 100 protein.
Length = 464
Score = 31.9 bits (69), Expect = 3.6
Identities = 15/74 (20%), Positives = 32/74 (43%)
Frame = +3
Query: 306 NKPKRPLTPFXXXMSQMRPALLAKNPGISSXEAIAWTSKHWXQLDMETXTQMAKEYQKDX 485
N+P++P++ + + A+ +NP + + + W L E ++ +
Sbjct: 202 NEPQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVASMWDSLGEEQKQAYKRKTEAAK 261
Query: 486 EDYNKIKAXYETSL 527
++Y K A Y SL
Sbjct: 262 KEYLKALAAYRASL 275
>AL353648-2|CAI15601.1| 162|Homo sapiens high-mobility group box 1
protein.
Length = 162
Score = 31.5 bits (68), Expect = 4.8
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = +3
Query: 306 NKPKRPLTPFXXXMSQMRPALLAKNPGISSXEAIAWTSKHW 428
N PKRP + F S+ RP + ++PG+S + + W
Sbjct: 93 NAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMW 133
>BC033492-1|AAH33492.2| 753|Homo sapiens SRY (sex determining
region Y)-box 30 protein.
Length = 753
Score = 31.1 bits (67), Expect = 6.4
Identities = 18/62 (29%), Positives = 24/62 (38%)
Frame = +3
Query: 315 KRPLTPFXXXMSQMRPALLAKNPGISSXEAIAWTSKHWXQLDMETXTQMAKEYQKDXEDY 494
KRP+ F RPAL NP ++ E W +L E E QK E +
Sbjct: 338 KRPMNAFMVWARIHRPALAKANPAANNAEISVQLGLEWNKLSEEQKKPYYDEAQKIKEKH 397
Query: 495 NK 500
+
Sbjct: 398 RE 399
>AC007277-1|AAF19244.1| 191|Homo sapiens WUGSC:H_NH0244E06.1
protein.
Length = 191
Score = 31.1 bits (67), Expect = 6.4
Identities = 18/70 (25%), Positives = 28/70 (40%)
Frame = +3
Query: 306 NKPKRPLTPFXXXMSQMRPALLAKNPGISSXEAIAWTSKHWXQLDMETXTQMAKEYQKDX 485
N PKRP + F S+ P + ++PG+ + + W + K+ K
Sbjct: 93 NAPKRPPSAFLLFCSEYCPKIKGEHPGLPISDVAKKLVEMWNNTFADDKQLCEKKAAKLK 152
Query: 486 EDYNKIKAXY 515
E Y K A Y
Sbjct: 153 EKYKKDTATY 162
>AB022441-1|BAA37149.1| 501|Homo sapiens Sox30 protein typeII
protein.
Length = 501
Score = 31.1 bits (67), Expect = 6.4
Identities = 18/62 (29%), Positives = 24/62 (38%)
Frame = +3
Query: 315 KRPLTPFXXXMSQMRPALLAKNPGISSXEAIAWTSKHWXQLDMETXTQMAKEYQKDXEDY 494
KRP+ F RPAL NP ++ E W +L E E QK E +
Sbjct: 338 KRPMNAFMVWARIHRPALAKANPAANNAEISVQLGLEWNKLSEEQKKPYYDEAQKIKEKH 397
Query: 495 NK 500
+
Sbjct: 398 RE 399
>AB022083-1|BAA37146.1| 753|Homo sapiens SOX30 protein protein.
Length = 753
Score = 31.1 bits (67), Expect = 6.4
Identities = 18/62 (29%), Positives = 24/62 (38%)
Frame = +3
Query: 315 KRPLTPFXXXMSQMRPALLAKNPGISSXEAIAWTSKHWXQLDMETXTQMAKEYQKDXEDY 494
KRP+ F RPAL NP ++ E W +L E E QK E +
Sbjct: 338 KRPMNAFMVWARIHRPALAKANPAANNAEISVQLGLEWNKLSEEQKKPYYDEAQKIKEKH 397
Query: 495 NK 500
+
Sbjct: 398 RE 399
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,610,143
Number of Sequences: 237096
Number of extensions: 1437737
Number of successful extensions: 2222
Number of sequences better than 10.0: 78
Number of HSP's better than 10.0 without gapping: 1872
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2184
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 12991778748
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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