BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP16_F_K13
(874 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC067786-1|AAH67786.1| 136|Homo sapiens hypothetical protein MG... 89 1e-17
BC009461-1|AAH09461.1| 136|Homo sapiens hypothetical protein MG... 89 1e-17
BC009283-1|AAH09283.1| 136|Homo sapiens hypothetical protein MG... 89 1e-17
BC001430-1|AAH01430.1| 140|Homo sapiens processing of precursor... 87 1e-16
U94316-1|AAC24113.1| 140|Homo sapiens ribonuclease P protein su... 85 4e-16
BC103822-1|AAI03823.1| 350|Homo sapiens transmembrane protein 1... 41 0.007
BC103821-1|AAI03822.1| 350|Homo sapiens transmembrane protein 1... 41 0.007
BC103820-1|AAI03821.1| 243|Homo sapiens TMEM185A protein protein. 41 0.007
AF530473-1|AAM94598.1| 350|Homo sapiens family with sequence si... 41 0.007
AC012363-2|AAY14799.1| 350|Homo sapiens unknown protein. 39 0.027
BC080607-1|AAH80607.1| 350|Homo sapiens TMEM185B protein protein. 38 0.047
AB065441-1|BAC05708.1| 309|Homo sapiens seven transmembrane hel... 32 2.4
AF399508-1|AAK94993.1| 215|Homo sapiens olfactory receptor prot... 31 4.1
AB065829-1|BAC06048.1| 313|Homo sapiens seven transmembrane hel... 31 4.1
AB065826-1|BAC06045.1| 313|Homo sapiens seven transmembrane hel... 31 4.1
AJ006778-1|CAA07243.1| 2785|Homo sapiens DRIM protein protein. 30 9.5
AF072718-1|AAG35208.1| 879|Homo sapiens Key-1A6 protein protein. 30 9.5
>BC067786-1|AAH67786.1| 136|Homo sapiens hypothetical protein
MGC14327 protein.
Length = 136
Score = 89.4 bits (212), Expect = 1e-17
Identities = 35/86 (40%), Positives = 58/86 (67%), Gaps = 1/86 (1%)
Frame = +1
Query: 520 MFFTLNEIVQWIGLTVFEIWINLITLTIFSVLLALKIDGVL-NSAWWTIFAPLFVSDAMN 696
M F+L E+VQW+G FEI+++L+ L +FSVLLAL++DG++ +WW +F P F +D ++
Sbjct: 1 MLFSLRELVQWLGFATFEIFVHLLALLVFSVLLALRVDGLVPGLSWWNVFVPFFAADGLS 60
Query: 697 AYFCCIVCIRMNLENSYKASLYRASW 774
YF IV +R+ + + ++ R W
Sbjct: 61 TYFTTIVSVRLFQDGEKRLAVLRLFW 86
>BC009461-1|AAH09461.1| 136|Homo sapiens hypothetical protein
MGC14327 protein.
Length = 136
Score = 89.4 bits (212), Expect = 1e-17
Identities = 35/86 (40%), Positives = 58/86 (67%), Gaps = 1/86 (1%)
Frame = +1
Query: 520 MFFTLNEIVQWIGLTVFEIWINLITLTIFSVLLALKIDGVL-NSAWWTIFAPLFVSDAMN 696
M F+L E+VQW+G FEI+++L+ L +FSVLLAL++DG++ +WW +F P F +D ++
Sbjct: 1 MLFSLRELVQWLGFATFEIFVHLLALLVFSVLLALRVDGLVPGLSWWNVFVPFFAADGLS 60
Query: 697 AYFCCIVCIRMNLENSYKASLYRASW 774
YF IV +R+ + + ++ R W
Sbjct: 61 TYFTTIVSVRLFQDGEKRLAVLRLFW 86
>BC009283-1|AAH09283.1| 136|Homo sapiens hypothetical protein
MGC14327 protein.
Length = 136
Score = 89.4 bits (212), Expect = 1e-17
Identities = 35/86 (40%), Positives = 58/86 (67%), Gaps = 1/86 (1%)
Frame = +1
Query: 520 MFFTLNEIVQWIGLTVFEIWINLITLTIFSVLLALKIDGVL-NSAWWTIFAPLFVSDAMN 696
M F+L E+VQW+G FEI+++L+ L +FSVLLAL++DG++ +WW +F P F +D ++
Sbjct: 1 MLFSLRELVQWLGFATFEIFVHLLALLVFSVLLALRVDGLVPGLSWWNVFVPFFAADGLS 60
Query: 697 AYFCCIVCIRMNLENSYKASLYRASW 774
YF IV +R+ + + ++ R W
Sbjct: 61 TYFTTIVSVRLFQDGEKRLAVLRLFW 86
>BC001430-1|AAH01430.1| 140|Homo sapiens processing of precursor 7,
ribonuclease P subunit (S. cerevisiae) protein.
Length = 140
Score = 86.6 bits (205), Expect = 1e-16
Identities = 46/97 (47%), Positives = 61/97 (62%), Gaps = 6/97 (6%)
Frame = +3
Query: 144 YALKKRLPPRPVNGDNVLFITKKTNFKAQLDKCCDLLTRGEK------EIILHGLGAAIQ 305
Y L+KRLP R N +++ KT+FKAQL +C LL G + EI +HGLG AI
Sbjct: 20 YTLRKRLPSRLPRRPNDIYVNMKTDFKAQLARCQKLLDGGARGQNACSEIYIHGLGLAIN 79
Query: 306 RCCNLALQLEILFSGTCQIEVNTGSVDLVDDLEPLTD 416
R N+ALQL+ G+ Q+ NT +V+LVD+LEP TD
Sbjct: 80 RAINIALQLQAGSFGSLQVAANTSTVELVDELEPETD 116
>U94316-1|AAC24113.1| 140|Homo sapiens ribonuclease P protein
subunit p20 protein.
Length = 140
Score = 84.6 bits (200), Expect = 4e-16
Identities = 45/97 (46%), Positives = 60/97 (61%), Gaps = 6/97 (6%)
Frame = +3
Query: 144 YALKKRLPPRPVNGDNVLFITKKTNFKAQLDKCCDLLTRGEK------EIILHGLGAAIQ 305
Y L+KRLP R N +++ KT+FKAQL +C LL G + EI +HGLG AI
Sbjct: 20 YTLRKRLPSRLPRRPNDIYVNMKTDFKAQLARCQKLLDGGARGQNACSEIYIHGLGLAIN 79
Query: 306 RCCNLALQLEILFSGTCQIEVNTGSVDLVDDLEPLTD 416
N+ALQL+ G+ Q+ NT +V+LVD+LEP TD
Sbjct: 80 HAINIALQLQAGSFGSLQVAANTSTVELVDELEPETD 116
>BC103822-1|AAI03823.1| 350|Homo sapiens transmembrane protein 185A
protein.
Length = 350
Score = 40.7 bits (91), Expect = 0.007
Identities = 14/29 (48%), Positives = 25/29 (86%)
Frame = +1
Query: 595 LTIFSVLLALKIDGVLNSAWWTIFAPLFV 681
L +FSVLLAL++DG++ ++W +FAP+++
Sbjct: 21 LLLFSVLLALRLDGIIQWSYWAVFAPIWL 49
>BC103821-1|AAI03822.1| 350|Homo sapiens transmembrane protein 185A
protein.
Length = 350
Score = 40.7 bits (91), Expect = 0.007
Identities = 14/29 (48%), Positives = 25/29 (86%)
Frame = +1
Query: 595 LTIFSVLLALKIDGVLNSAWWTIFAPLFV 681
L +FSVLLAL++DG++ ++W +FAP+++
Sbjct: 21 LLLFSVLLALRLDGIIQWSYWAVFAPIWL 49
>BC103820-1|AAI03821.1| 243|Homo sapiens TMEM185A protein protein.
Length = 243
Score = 40.7 bits (91), Expect = 0.007
Identities = 14/29 (48%), Positives = 25/29 (86%)
Frame = +1
Query: 595 LTIFSVLLALKIDGVLNSAWWTIFAPLFV 681
L +FSVLLAL++DG++ ++W +FAP+++
Sbjct: 21 LLLFSVLLALRLDGIIQWSYWAVFAPIWL 49
>AF530473-1|AAM94598.1| 350|Homo sapiens family with sequence
similarity 11 member A protein.
Length = 350
Score = 40.7 bits (91), Expect = 0.007
Identities = 14/29 (48%), Positives = 25/29 (86%)
Frame = +1
Query: 595 LTIFSVLLALKIDGVLNSAWWTIFAPLFV 681
L +FSVLLAL++DG++ ++W +FAP+++
Sbjct: 21 LLLFSVLLALRLDGIIQWSYWAVFAPIWL 49
>AC012363-2|AAY14799.1| 350|Homo sapiens unknown protein.
Length = 350
Score = 38.7 bits (86), Expect = 0.027
Identities = 13/29 (44%), Positives = 24/29 (82%)
Frame = +1
Query: 595 LTIFSVLLALKIDGVLNSAWWTIFAPLFV 681
L +FSVLL L++DG++ ++W +FAP+++
Sbjct: 21 LLLFSVLLPLRLDGIIQWSYWAVFAPIWL 49
>BC080607-1|AAH80607.1| 350|Homo sapiens TMEM185B protein protein.
Length = 350
Score = 37.9 bits (84), Expect = 0.047
Identities = 13/29 (44%), Positives = 24/29 (82%)
Frame = +1
Query: 595 LTIFSVLLALKIDGVLNSAWWTIFAPLFV 681
L +FSVLL L++DG++ ++W +FAP+++
Sbjct: 21 LLLFSVLLPLRLDGIIQWSYWGVFAPIWL 49
>AB065441-1|BAC05708.1| 309|Homo sapiens seven transmembrane helix
receptor protein.
Length = 309
Score = 32.3 bits (70), Expect = 2.4
Identities = 20/62 (32%), Positives = 31/62 (50%)
Frame = -3
Query: 686 SLTNKGANIVHHALFNTPSILRANSTENIVSVIRLIHISNTVSPIHCTISFSVKNIITLS 507
SL+ G+N+VH + P +L + +EN++ I LI I N V C I + + S
Sbjct: 163 SLSYCGSNMVHQFFCDIPQLLAISCSENLIREIALILI-NVVLDFCCFIVIIITYVHVFS 221
Query: 506 LV 501
V
Sbjct: 222 TV 223
>AF399508-1|AAK94993.1| 215|Homo sapiens olfactory receptor
protein.
Length = 215
Score = 31.5 bits (68), Expect = 4.1
Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Frame = -3
Query: 683 LTNKGANIVHHALFNTPSILRANSTENIVS-VIRLIHISNTVSPIHCTISFSVKNIITLS 507
LT ANI++H L + +L+ + T V+ V+ LI + ++ CTI S I+T S
Sbjct: 99 LTFCSANIINHYLCDILPLLQLSCTSTYVNEVVVLIVVGTNITVPSCTILISYVFIVT-S 157
Query: 506 LVLIRS 489
++ I+S
Sbjct: 158 ILHIKS 163
>AB065829-1|BAC06048.1| 313|Homo sapiens seven transmembrane helix
receptor protein.
Length = 313
Score = 31.5 bits (68), Expect = 4.1
Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Frame = -3
Query: 683 LTNKGANIVHHALFNTPSILRANSTENIVS-VIRLIHISNTVSPIHCTISFSVKNIITLS 507
LT ANI++H L + +L+ + T V+ V+ LI + ++ CTI S I+T S
Sbjct: 166 LTFCSANIINHYLCDILPLLQLSCTSTYVNEVVVLIVVGTNITVPSCTILISYVFIVT-S 224
Query: 506 LVLIRS 489
++ I+S
Sbjct: 225 ILHIKS 230
>AB065826-1|BAC06045.1| 313|Homo sapiens seven transmembrane helix
receptor protein.
Length = 313
Score = 31.5 bits (68), Expect = 4.1
Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Frame = -3
Query: 683 LTNKGANIVHHALFNTPSILRANSTENIVS-VIRLIHISNTVSPIHCTISFSVKNIITLS 507
LT ANI++H L + +L+ + T V+ V+ LI + ++ CTI S I+T S
Sbjct: 166 LTFCSANIINHYLCDILPLLQLSCTSTYVNEVVVLIVVGTNITVPSCTILISYVFIVT-S 224
Query: 506 LVLIRS 489
++ I+S
Sbjct: 225 ILHIKS 230
>AJ006778-1|CAA07243.1| 2785|Homo sapiens DRIM protein protein.
Length = 2785
Score = 30.3 bits (65), Expect = 9.5
Identities = 19/74 (25%), Positives = 33/74 (44%)
Frame = +3
Query: 162 LPPRPVNGDNVLFITKKTNFKAQLDKCCDLLTRGEKEIILHGLGAAIQRCCNLALQLEIL 341
LPP PV G +++KTN ++ LL K + G + + + L I
Sbjct: 2061 LPPTPVRGGQKAVVSRKTNMHIFIESGLRLLHLSLKTSKIKSSGECVLEMLDPFVSLLID 2120
Query: 342 FSGTCQIEVNTGSV 383
G+ ++V TG++
Sbjct: 2121 CLGSMDVKVITGAL 2134
>AF072718-1|AAG35208.1| 879|Homo sapiens Key-1A6 protein protein.
Length = 879
Score = 30.3 bits (65), Expect = 9.5
Identities = 19/74 (25%), Positives = 33/74 (44%)
Frame = +3
Query: 162 LPPRPVNGDNVLFITKKTNFKAQLDKCCDLLTRGEKEIILHGLGAAIQRCCNLALQLEIL 341
LPP PV G +++KTN ++ LL K + G + + + L I
Sbjct: 155 LPPTPVRGGQKAVVSRKTNMHIFIESGLRLLHLSLKTSKIKSSGECVLEMLDPFVSLLID 214
Query: 342 FSGTCQIEVNTGSV 383
G+ ++V TG++
Sbjct: 215 CLGSMDVKVITGAL 228
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,152,888
Number of Sequences: 237096
Number of extensions: 2191392
Number of successful extensions: 3521
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 3328
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3512
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11104084400
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -