Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP16_F_K11
(892 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB183889-1|BAD86829.1| 316|Apis mellifera Mos protein. 31 0.011
DQ325124-1|ABD14138.1| 179|Apis mellifera complementary sex det... 27 0.23
DQ325123-1|ABD14137.1| 179|Apis mellifera complementary sex det... 27 0.23
DQ325122-1|ABD14136.1| 179|Apis mellifera complementary sex det... 27 0.30
EF625896-1|ABR45903.1| 683|Apis mellifera hexamerin protein. 25 1.2
AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein. 25 1.2
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 24 1.6
AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex det... 23 2.8
EF625898-1|ABR45905.1| 686|Apis mellifera hexamerin protein. 23 4.9
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 23 4.9
DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex det... 23 4.9
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 22 6.5
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 22 6.5
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 22 6.5
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 22 6.5
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 22 6.5
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 22 6.5
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 22 6.5
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 22 6.5
AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 22 8.6
>AB183889-1|BAD86829.1| 316|Apis mellifera Mos protein.
Length = 316
Score = 31.5 bits (68), Expect = 0.011
Identities = 19/53 (35%), Positives = 32/53 (60%), Gaps = 2/53 (3%)
Frame = +2
Query: 542 IGNGSFGVVYQAKLCDTGELIAIKKVLQDKRFKN--RELQIMRRLEHCNIVKL 694
+G+G FG+VY+A GE +A K++Q +++ N + L+H NIVK+
Sbjct: 73 LGSGGFGIVYKALY--KGEQVA-AKIIQTEKYSNMLNSEKHASFLKHSNIVKV 122
>DQ325124-1|ABD14138.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 27.1 bits (57), Expect = 0.23
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 3/55 (5%)
Frame = +1
Query: 25 YREFLKILAESSRMNERVQVKPDETKI---L*YTFNVNFEKLSK*YCNSVVELFY 180
YR++ + E SR + + + K E KI L +N N K YCN+ +L+Y
Sbjct: 56 YRKYRETSKERSR-DRKEREKSKEHKIISSLSNNYNYNNNNYKKLYCNNYKKLYY 109
>DQ325123-1|ABD14137.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 27.1 bits (57), Expect = 0.23
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 3/55 (5%)
Frame = +1
Query: 25 YREFLKILAESSRMNERVQVKPDETKI---L*YTFNVNFEKLSK*YCNSVVELFY 180
YR++ + E SR + + + K E KI L +N N K YCN+ +L+Y
Sbjct: 56 YRKYRETSKERSR-DRKEREKSKEHKIISSLSNNYNYNNNNYKKLYCNNYKKLYY 109
>DQ325122-1|ABD14136.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 26.6 bits (56), Expect = 0.30
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 3/55 (5%)
Frame = +1
Query: 25 YREFLKILAESSRMNERVQVKPDETKI---L*YTFNVNFEKLSK*YCNSVVELFY 180
YR++ + E SR + + + K E KI L +N N K YCN+ +L+Y
Sbjct: 56 YRKYRETSKERSR-DRKEREKSKEHKIISSLSNNYNYNNNNYKKLYCNNYRKLYY 109
>EF625896-1|ABR45903.1| 683|Apis mellifera hexamerin protein.
Length = 683
Score = 24.6 bits (51), Expect = 1.2
Identities = 13/56 (23%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
Frame = -1
Query: 760 YSSTKFRYTSSFFSPXGIKEILQFHNVAMLQPSHDLK-FSVLKPLVLEHLLDGNEL 596
YSS + + P G KE + ++ + ++ P D + P+ H+ DG +
Sbjct: 591 YSSQPYGFPERLLLPKGKKEGMPYNVLVVVSPFDDSNVVQIDSPVWGRHIYDGRAM 646
>AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein.
Length = 683
Score = 24.6 bits (51), Expect = 1.2
Identities = 13/56 (23%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
Frame = -1
Query: 760 YSSTKFRYTSSFFSPXGIKEILQFHNVAMLQPSHDLK-FSVLKPLVLEHLLDGNEL 596
YSS + + P G KE + ++ + ++ P D + P+ H+ DG +
Sbjct: 591 YSSQPYGFPERLLLPKGKKEGMPYNVLVVVSPFDDSNVVQIDSPVWGRHIYDGRAM 646
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 24.2 bits (50), Expect = 1.6
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = +2
Query: 788 RHYSKDEQPYPLVL*SCTC 844
R++ D Q PL+L SC C
Sbjct: 167 RNFPMDRQSCPLILGSCKC 185
>AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 23.4 bits (48), Expect = 2.8
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = -1
Query: 250 TLSNTNSMKKYLKQYHYYEIKNQNKIVPLQNY 155
T+ N N+ K Y K+ +Y I + VP+ Y
Sbjct: 322 TIHNNNNYKNYNKKLYYNIINIEQIPVPVPVY 353
>EF625898-1|ABR45905.1| 686|Apis mellifera hexamerin protein.
Length = 686
Score = 22.6 bits (46), Expect = 4.9
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = -1
Query: 253 TTLSNTNSMKKYLKQYHYYEIK 188
T + NTN KY+++Y+ E K
Sbjct: 199 TYIVNTNYSSKYMREYNDPEYK 220
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 22.6 bits (46), Expect = 4.9
Identities = 7/22 (31%), Positives = 14/22 (63%)
Frame = -1
Query: 205 HYYEIKNQNKIVPLQNYSIILI 140
HYY + +QN V +++Y ++
Sbjct: 166 HYYPLDSQNCTVEIESYGYTVL 187
>DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 22.6 bits (46), Expect = 4.9
Identities = 11/34 (32%), Positives = 16/34 (47%)
Frame = -1
Query: 250 TLSNTNSMKKYLKQYHYYEIKNQNKIVPLQNYSI 149
T+ N N+ K + Y N NK + +NY I
Sbjct: 89 TIHNNNNYKYNYNNKYNYNNNNYNKKLYYKNYII 122
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 22.2 bits (45), Expect = 6.5
Identities = 9/22 (40%), Positives = 11/22 (50%)
Frame = -3
Query: 728 FLFAXWNKRNTSVSQCCNAPAV 663
+L K+NT QCC P V
Sbjct: 161 YLIGMPGKKNTITYQCCPEPYV 182
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 22.2 bits (45), Expect = 6.5
Identities = 9/22 (40%), Positives = 11/22 (50%)
Frame = -3
Query: 728 FLFAXWNKRNTSVSQCCNAPAV 663
+L K+NT QCC P V
Sbjct: 161 YLIGMPGKKNTITYQCCPEPYV 182
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 22.2 bits (45), Expect = 6.5
Identities = 9/22 (40%), Positives = 11/22 (50%)
Frame = -3
Query: 728 FLFAXWNKRNTSVSQCCNAPAV 663
+L K+NT QCC P V
Sbjct: 161 YLIGMPGKKNTITYQCCPEPYV 182
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 22.2 bits (45), Expect = 6.5
Identities = 9/22 (40%), Positives = 11/22 (50%)
Frame = -3
Query: 728 FLFAXWNKRNTSVSQCCNAPAV 663
+L K+NT QCC P V
Sbjct: 161 YLIGMPGKKNTITYQCCPEPYV 182
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 22.2 bits (45), Expect = 6.5
Identities = 9/22 (40%), Positives = 11/22 (50%)
Frame = -3
Query: 728 FLFAXWNKRNTSVSQCCNAPAV 663
+L K+NT QCC P V
Sbjct: 161 YLIGMPGKKNTITYQCCPEPYV 182
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 22.2 bits (45), Expect = 6.5
Identities = 9/22 (40%), Positives = 11/22 (50%)
Frame = -3
Query: 728 FLFAXWNKRNTSVSQCCNAPAV 663
+L K+NT QCC P V
Sbjct: 161 YLIGMPGKKNTITYQCCPEPYV 182
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 22.2 bits (45), Expect = 6.5
Identities = 9/22 (40%), Positives = 11/22 (50%)
Frame = -3
Query: 728 FLFAXWNKRNTSVSQCCNAPAV 663
+L K+NT QCC P V
Sbjct: 229 YLIGMPGKKNTITYQCCPEPYV 250
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 22.2 bits (45), Expect = 6.5
Identities = 9/22 (40%), Positives = 11/22 (50%)
Frame = -3
Query: 728 FLFAXWNKRNTSVSQCCNAPAV 663
+L K+NT QCC P V
Sbjct: 229 YLIGMPGKKNTITYQCCPEPYV 250
>AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation
factor 2 protein.
Length = 690
Score = 21.8 bits (44), Expect = 8.6
Identities = 8/25 (32%), Positives = 15/25 (60%)
Frame = +2
Query: 620 LQDKRFKNRELQIMRRLEHCNIVKL 694
L DK+FKN+ L ++ + + +L
Sbjct: 43 LMDKQFKNKSLPVIEIWDQMTVKEL 67
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 231,444
Number of Sequences: 438
Number of extensions: 4987
Number of successful extensions: 21
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 28783482
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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