Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP16_F_K06
         (890 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_01_0288 + 1932171-1932188,1932264-1933280                           29   5.0  
07_03_0634 + 20125242-20125688                                         28   8.7  

>02_01_0288 + 1932171-1932188,1932264-1933280
          Length = 344

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 25/74 (33%), Positives = 35/74 (47%)
 Frame = +3

Query: 285 GSVRNEARDGRPFNY**HLSGTRRAXIRNRKNHQSKITG*SMHLQRLIASGRSFEYSECT 464
           G+VRN + DG  F    H    +RA  R+R +HQ    G  +H      +GR F +  C+
Sbjct: 274 GAVRNPSPDGEDFAGGAHGVAAKRAVARDRHHHQ---LGEGLHAAGDEPAGRHF-WLGCS 329

Query: 465 SLA*REFAKDSCLK 506
               R  A+  CLK
Sbjct: 330 ----RARARGICLK 339


>07_03_0634 + 20125242-20125688
          Length = 148

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = -3

Query: 480 PVTPATYTPNIRMNVHWQSIAAGASIIQL 394
           P  P T+ P+ R  VHW+++    S+  L
Sbjct: 14  PEIPTTFNPDPRRRVHWRNMRCANSVAYL 42


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,709,513
Number of Sequences: 37544
Number of extensions: 350710
Number of successful extensions: 747
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 733
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 747
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2506954360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)