Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP16_F_K05
(892 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF068714-2|AAC17807.1| 248|Caenorhabditis elegans Initiation fa... 201 5e-52
AF068714-3|AAM22022.1| 250|Caenorhabditis elegans Initiation fa... 198 6e-51
AF068714-4|AAK68676.1| 251|Caenorhabditis elegans Initiation fa... 197 1e-50
Z81546-5|CAB04454.2| 212|Caenorhabditis elegans Hypothetical pr... 148 5e-36
U41550-3|AAA83286.1| 228|Caenorhabditis elegans Initiation fact... 145 4e-35
AL117195-23|CAB60769.1| 240|Caenorhabditis elegans Hypothetical... 141 7e-34
AL117195-24|CAB55035.1| 201|Caenorhabditis elegans Hypothetical... 140 2e-33
AF214652-1|AAF62415.1| 201|Caenorhabditis elegans translation i... 140 2e-33
U64605-1|AAF98601.1| 212|Caenorhabditis elegans Initiation fact... 96 3e-20
AF214651-1|AAF62414.1| 212|Caenorhabditis elegans translation i... 96 3e-20
AF045642-12|AAD34648.1| 348|Caenorhabditis elegans Hypothetical... 29 5.9
>AF068714-2|AAC17807.1| 248|Caenorhabditis elegans Initiation
factor 4e (eif4e) familyprotein 3, isoform a protein.
Length = 248
Score = 201 bits (491), Expect = 5e-52
Identities = 87/173 (50%), Positives = 122/173 (70%), Gaps = 1/173 (0%)
Frame = +2
Query: 302 SNAEVPPEFLIKHPLQNQWSLWFYDNDRNKTWEENLIELTTFDTVEDFWRLYHHIKLPSE 481
S+A VPPE L +HPLQN+W+LW+ DRNK WE+ L ++ FDTVEDFW LY+HI+
Sbjct: 20 SDASVPPELLTRHPLQNRWALWYLKADRNKEWEDCLKMVSLFDTVEDFWSLYNHIQSAGG 79
Query: 482 LRQGHDYAVFKQGIRPMWEDDANKMGGRWLISLEKKQRFTDLDRFWLDVVLLLIGENF-E 658
L G DY +FK+GI+PMWED N GGRWL+ ++K++R LD +WL++++ ++GE F E
Sbjct: 80 LNWGSDYYLFKEGIKPMWEDVNNVQGGRWLVVVDKQRRTQLLDHYWLELLMAIVGEQFDE 139
Query: 659 NSDEICGAVVNVRPKVDKIAIWTADAMKQHATIEIGKKLKEQLGIXGKIVSKY 817
D ICGAVVNVR K DK+++WT DA + + IG+ LK++L I + +Y
Sbjct: 140 YGDYICGAVVNVRQKGDKVSLWTRDATRDDVNLRIGQVLKQKLSIPDTEILRY 192
>AF068714-3|AAM22022.1| 250|Caenorhabditis elegans Initiation
factor 4e (eif4e) familyprotein 3, isoform c protein.
Length = 250
Score = 198 bits (482), Expect = 6e-51
Identities = 89/175 (50%), Positives = 123/175 (70%), Gaps = 3/175 (1%)
Frame = +2
Query: 302 SNAEVPPEFLIKHPLQNQWSLWFYDNDRNKTWEENLIELTTFDTVEDFWRLYHHIKLPSE 481
S+A VPPE L +HPLQN+W+LW+ DRNK WE+ L ++ FDTVEDFW LY+HI+
Sbjct: 20 SDASVPPELLTRHPLQNRWALWYLKADRNKEWEDCLKMVSLFDTVEDFWSLYNHIQSAGG 79
Query: 482 LRQGHDYAVFKQGIRPMWEDDANKMGGRWLISLEKK-QRFTD-LDRFWLDVVLLLIGENF 655
L G DY +FK+GI+PMWED N GGRWL+ ++K+ QR T LD +WL++++ ++GE F
Sbjct: 80 LNWGSDYYLFKEGIKPMWEDVNNVQGGRWLVVVDKQLQRRTQLLDHYWLELLMAIVGEQF 139
Query: 656 -ENSDEICGAVVNVRPKVDKIAIWTADAMKQHATIEIGKKLKEQLGIXGKIVSKY 817
E D ICGAVVNVR K DK+++WT DA + + IG+ LK++L I + +Y
Sbjct: 140 DEYGDYICGAVVNVRQKGDKVSLWTRDATRDDVNLRIGQVLKQKLSIPDTEILRY 194
>AF068714-4|AAK68676.1| 251|Caenorhabditis elegans Initiation
factor 4e (eif4e) familyprotein 3, isoform b protein.
Length = 251
Score = 197 bits (480), Expect = 1e-50
Identities = 89/176 (50%), Positives = 123/176 (69%), Gaps = 4/176 (2%)
Frame = +2
Query: 302 SNAEVPPEFLIKHPLQNQWSLWFYDNDRNKTWEENLIELTTFDTVEDFWRLYHHIKLPSE 481
S+A VPPE L +HPLQN+W+LW+ DRNK WE+ L ++ FDTVEDFW LY+HI+
Sbjct: 20 SDASVPPELLTRHPLQNRWALWYLKADRNKEWEDCLKMVSLFDTVEDFWSLYNHIQSAGG 79
Query: 482 LRQGHDYAVFKQGIRPMWEDDANKMGGRWLISLEKK--QRFTD-LDRFWLDVVLLLIGEN 652
L G DY +FK+GI+PMWED N GGRWL+ ++K+ QR T LD +WL++++ ++GE
Sbjct: 80 LNWGSDYYLFKEGIKPMWEDVNNVQGGRWLVVVDKQKLQRRTQLLDHYWLELLMAIVGEQ 139
Query: 653 F-ENSDEICGAVVNVRPKVDKIAIWTADAMKQHATIEIGKKLKEQLGIXGKIVSKY 817
F E D ICGAVVNVR K DK+++WT DA + + IG+ LK++L I + +Y
Sbjct: 140 FDEYGDYICGAVVNVRQKGDKVSLWTRDATRDDVNLRIGQVLKQKLSIPDTEILRY 195
>Z81546-5|CAB04454.2| 212|Caenorhabditis elegans Hypothetical
protein F53A2.6 protein.
Length = 212
Score = 148 bits (359), Expect = 5e-36
Identities = 68/160 (42%), Positives = 100/160 (62%), Gaps = 1/160 (0%)
Frame = +2
Query: 338 HPLQNQWSLWFYDNDRNKTWEENLIELTTFDTVEDFWRLYHHIKLPSELRQGHDYAVFKQ 517
+PL+ W+ W+ +++RNK+WE+ L ++ TF+TV +FW LY I+ PS L DY VF+
Sbjct: 12 YPLKRNWTWWYLNDERNKSWEDRLKKVYTFNTVSEFWALYDAIRPPSGLNALCDYNVFRD 71
Query: 518 GIRPMWEDDANKMGGRWLISLEKKQRFTDLDRFWLDVVLLLIGENF-ENSDEICGAVVNV 694
I+PMWE N GGRWLI ++K + +D WL++++ L+GE F ++ + ICG V NV
Sbjct: 72 DIQPMWEVPENSNGGRWLIVIDKGKTPEMVDAIWLEILMALVGEQFGKDMESICGLVCNV 131
Query: 695 RPKVDKIAIWTADAMKQHATIEIGKKLKEQLGIXGKIVSK 814
R K KI++WT D + IG LKE+L K SK
Sbjct: 132 RGKGSKISVWTKDCNDDETNMRIGVVLKEKLMAASKDHSK 171
>U41550-3|AAA83286.1| 228|Caenorhabditis elegans Initiation factor
4e (eif4e) familyprotein 2 protein.
Length = 228
Score = 145 bits (351), Expect = 4e-35
Identities = 66/156 (42%), Positives = 98/156 (62%), Gaps = 4/156 (2%)
Frame = +2
Query: 332 IKHP---LQNQWSLWFYDNDRNKTWEENLIELTTFDTVEDFWRLYHHIKLPSELRQGHDY 502
I HP L+ W+ W+ +++RNK+WEE L + TF +V +FW L+ IK PS L DY
Sbjct: 12 ISHPVYKLKRNWTWWYLNDERNKSWEERLKNVKTFSSVGEFWALHDSIKPPSGLNPPSDY 71
Query: 503 AVFKQGIRPMWEDDANKMGGRWLISLEKKQRFTDLDRFWLDVVLLLIGENF-ENSDEICG 679
VF+ GI PMWE N+ GGRWLI++EK + +D W ++++ +IGE F ++ + +CG
Sbjct: 72 NVFRDGIEPMWEVPQNQNGGRWLITIEKGRTPEIMDTIWTEILMAMIGEQFSDDIESLCG 131
Query: 680 AVVNVRPKVDKIAIWTADAMKQHATIEIGKKLKEQL 787
V NVR K KI++WT ++ A + IG LK+ L
Sbjct: 132 IVCNVRGKGSKISVWTTNSADDGANLRIGGVLKQVL 167
>AL117195-23|CAB60769.1| 240|Caenorhabditis elegans Hypothetical
protein Y57A10A.30a protein.
Length = 240
Score = 141 bits (341), Expect = 7e-34
Identities = 72/174 (41%), Positives = 100/174 (57%), Gaps = 5/174 (2%)
Frame = +2
Query: 281 TTETKTNSNAEVPPEFLIK----HPLQNQWSLWFYDNDRNKTWEENLIELTTFDTVEDFW 448
T +KT A VP + +PLQ WS WF ++DRN +W++ L ++ TF+TV +FW
Sbjct: 25 TKRSKTQPLATVPADMTELTTPIYPLQRNWSWWFLNDDRNASWQDRLKKVYTFNTVPEFW 84
Query: 449 RLYHHIKLPSELRQGHDYAVFKQGIRPMWEDDANKMGGRWLISLEKKQRFTDLDRFWLDV 628
Y I PS L DY VF+ I+P WE N GGRWLI + K + LD WL++
Sbjct: 85 AFYEAILPPSGLNDLCDYNVFRDDIQPKWEAPENWDGGRWLIIINKGKTPEVLDAVWLEI 144
Query: 629 VLLLIGENF-ENSDEICGAVVNVRPKVDKIAIWTADAMKQHATIEIGKKLKEQL 787
+L LIGE F ++ + ICG V NVR + KI++WT + + IG LKE+L
Sbjct: 145 LLALIGEQFGKDMESICGLVCNVRGQGSKISVWTKNCNDDDTNMRIGVVLKEKL 198
>AL117195-24|CAB55035.1| 201|Caenorhabditis elegans Hypothetical
protein Y57A10A.30b protein.
Length = 201
Score = 140 bits (338), Expect = 2e-33
Identities = 66/151 (43%), Positives = 92/151 (60%), Gaps = 1/151 (0%)
Frame = +2
Query: 338 HPLQNQWSLWFYDNDRNKTWEENLIELTTFDTVEDFWRLYHHIKLPSELRQGHDYAVFKQ 517
+PLQ WS WF ++DRN +W++ L ++ TF+TV +FW Y I PS L DY VF+
Sbjct: 9 YPLQRNWSWWFLNDDRNASWQDRLKKVYTFNTVPEFWAFYEAILPPSGLNDLCDYNVFRD 68
Query: 518 GIRPMWEDDANKMGGRWLISLEKKQRFTDLDRFWLDVVLLLIGENF-ENSDEICGAVVNV 694
I+P WE N GGRWLI + K + LD WL+++L LIGE F ++ + ICG V NV
Sbjct: 69 DIQPKWEAPENWDGGRWLIIINKGKTPEVLDAVWLEILLALIGEQFGKDMESICGLVCNV 128
Query: 695 RPKVDKIAIWTADAMKQHATIEIGKKLKEQL 787
R + KI++WT + + IG LKE+L
Sbjct: 129 RGQGSKISVWTKNCNDDDTNMRIGVVLKEKL 159
>AF214652-1|AAF62415.1| 201|Caenorhabditis elegans translation
initiation factor eIF4Eisoform 5 protein.
Length = 201
Score = 140 bits (338), Expect = 2e-33
Identities = 66/151 (43%), Positives = 92/151 (60%), Gaps = 1/151 (0%)
Frame = +2
Query: 338 HPLQNQWSLWFYDNDRNKTWEENLIELTTFDTVEDFWRLYHHIKLPSELRQGHDYAVFKQ 517
+PLQ WS WF ++DRN +W++ L ++ TF+TV +FW Y I PS L DY VF+
Sbjct: 9 YPLQRNWSWWFLNDDRNASWQDRLKKVYTFNTVPEFWAFYEAILPPSGLNDLCDYNVFRD 68
Query: 518 GIRPMWEDDANKMGGRWLISLEKKQRFTDLDRFWLDVVLLLIGENF-ENSDEICGAVVNV 694
I+P WE N GGRWLI + K + LD WL+++L LIGE F ++ + ICG V NV
Sbjct: 69 DIQPKWEAPENWDGGRWLIIINKGKTPEVLDAVWLEILLALIGEQFGKDMESICGLVCNV 128
Query: 695 RPKVDKIAIWTADAMKQHATIEIGKKLKEQL 787
R + KI++WT + + IG LKE+L
Sbjct: 129 RGQGSKISVWTKNCNDDDTNMRIGVVLKEKL 159
>U64605-1|AAF98601.1| 212|Caenorhabditis elegans Initiation factor
4e (eif4e) familyprotein 4 protein.
Length = 212
Score = 96.3 bits (229), Expect = 3e-20
Identities = 47/129 (36%), Positives = 73/129 (56%)
Frame = +2
Query: 431 TVEDFWRLYHHIKLPSELRQGHDYAVFKQGIRPMWEDDANKMGGRWLISLEKKQRFTDLD 610
+VE FW + H K P+E+ D FK G++P+WED AN GG+W+I L+K
Sbjct: 66 SVEQFWSIMVHFKRPTEMCDKADIHFFKTGVKPVWEDPANCKGGKWIIRLKKGLS----T 121
Query: 611 RFWLDVVLLLIGENFENSDEICGAVVNVRPKVDKIAIWTADAMKQHATIEIGKKLKEQLG 790
R W ++++ +IGE F DE+CGAV ++R + D I++W +A T I + L+ L
Sbjct: 122 RIWENLLMAIIGEQFLVGDELCGAVCSIRNQEDIISLWNRNADDTPVTNRIRETLRSVLQ 181
Query: 791 IXGKIVSKY 817
+ V +Y
Sbjct: 182 LPQNTVLEY 190
>AF214651-1|AAF62414.1| 212|Caenorhabditis elegans translation
initiation factor eIF4Eisoform 4 protein.
Length = 212
Score = 96.3 bits (229), Expect = 3e-20
Identities = 47/129 (36%), Positives = 73/129 (56%)
Frame = +2
Query: 431 TVEDFWRLYHHIKLPSELRQGHDYAVFKQGIRPMWEDDANKMGGRWLISLEKKQRFTDLD 610
+VE FW + H K P+E+ D FK G++P+WED AN GG+W+I L+K
Sbjct: 66 SVEQFWSIMVHFKRPTEMCDKADIHFFKTGVKPVWEDPANCKGGKWIIRLKKGLS----T 121
Query: 611 RFWLDVVLLLIGENFENSDEICGAVVNVRPKVDKIAIWTADAMKQHATIEIGKKLKEQLG 790
R W ++++ +IGE F DE+CGAV ++R + D I++W +A T I + L+ L
Sbjct: 122 RIWENLLMAIIGEQFLVGDELCGAVCSIRNQEDIISLWNRNADDTPVTNRIRETLRSVLQ 181
Query: 791 IXGKIVSKY 817
+ V +Y
Sbjct: 182 LPQNTVLEY 190
>AF045642-12|AAD34648.1| 348|Caenorhabditis elegans Hypothetical
protein C17H12.8 protein.
Length = 348
Score = 28.7 bits (61), Expect = 5.9
Identities = 17/57 (29%), Positives = 27/57 (47%)
Frame = -2
Query: 696 LTLTTAPQISSEFSKFSPIKRRTTSNQNLSKSVKRCFFSRLISHLPPILLASSSHIG 526
LT T S++F F TT Q ++KSV R++ H +L + +H+G
Sbjct: 84 LTRTIVSSRSAKFVHFYIFPNTTTKFQVITKSVNMHSSFRIVVHFERMLNTTVTHLG 140
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,274,535
Number of Sequences: 27780
Number of extensions: 400914
Number of successful extensions: 1008
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 964
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 996
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2255353870
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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