Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP16_F_K04
(890 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L32988-1|AAA21776.1| 390|Drosophila melanogaster La ribonucleop... 199 5e-51
AY075257-1|AAL68124.1| 390|Drosophila melanogaster AT22034p pro... 199 5e-51
AE014134-3230|AAN11073.1| 390|Drosophila melanogaster CG10922-P... 199 5e-51
AE014134-3229|AAF53885.1| 390|Drosophila melanogaster CG10922-P... 199 5e-51
U07652-1|AAA20518.1| 390|Drosophila melanogaster La/SS-B protein. 196 3e-50
AY061107-1|AAL28655.1| 595|Drosophila melanogaster LD09531p pro... 66 5e-11
AF219009-1|AAF27644.1| 595|Drosophila melanogaster multi-sex-co... 66 5e-11
AE014298-1312|AAF46473.1| 595|Drosophila melanogaster CG12058-P... 66 5e-11
AE014297-4227|AAN14139.1| 965|Drosophila melanogaster CG14066-P... 40 0.003
AE014297-4226|AAF56783.3| 965|Drosophila melanogaster CG14066-P... 40 0.003
AE014297-4225|AAN14138.4| 1403|Drosophila melanogaster CG14066-P... 40 0.003
AY113653-1|AAM29658.1| 269|Drosophila melanogaster SD18087p pro... 40 0.006
AF221108-1|AAF35862.1| 1403|Drosophila melanogaster La related p... 40 0.006
BT010118-1|AAQ22587.1| 961|Drosophila melanogaster AT27581p pro... 38 0.025
AE014296-611|AAS64955.1| 958|Drosophila melanogaster CG11505-PC... 38 0.025
AE014296-610|AAF47745.1| 1521|Drosophila melanogaster CG11505-PA... 38 0.025
AE014296-609|AAG22237.2| 1531|Drosophila melanogaster CG11505-PB... 38 0.025
AY122226-1|AAM52738.1| 369|Drosophila melanogaster RE25373p pro... 35 0.13
AE014296-2876|AAF49366.3| 369|Drosophila melanogaster CG32169-P... 35 0.13
BT021231-1|AAX33379.1| 408|Drosophila melanogaster RH31156p pro... 31 2.1
AY119610-1|AAM50264.1| 825|Drosophila melanogaster LD34829p pro... 31 2.1
AE013599-3511|AAF46929.2| 408|Drosophila melanogaster CG30190-P... 31 2.1
AE013599-2414|AAM68495.2| 810|Drosophila melanogaster CG6967-PB... 31 2.1
AE013599-2413|AAF57908.2| 825|Drosophila melanogaster CG6967-PA... 31 2.1
AE014297-3192|AAF56027.3| 1346|Drosophila melanogaster CG31158-P... 31 2.8
AE014297-3191|AAO41590.1| 1480|Drosophila melanogaster CG31158-P... 31 2.8
AE014298-2607|AAF48760.1| 607|Drosophila melanogaster CG15816-P... 29 6.5
AY051730-1|AAK93154.1| 550|Drosophila melanogaster LD25919p pro... 29 8.6
AF186472-1|AAF01416.1| 1409|Drosophila melanogaster condensin su... 29 8.6
AF185287-1|AAF13306.1| 1409|Drosophila melanogaster XCAP-C/SMC4 ... 29 8.6
AE014134-2761|AAF53560.1| 1409|Drosophila melanogaster CG11397-P... 29 8.6
>L32988-1|AAA21776.1| 390|Drosophila melanogaster La
ribonucleoprotein protein.
Length = 390
Score = 199 bits (485), Expect = 5e-51
Identities = 94/186 (50%), Positives = 130/186 (69%), Gaps = 1/186 (0%)
Frame = +1
Query: 199 LRPVNSFKSDVNLHRDKFLQEQI-KLDDGWVPLEILTKFNRLAKLTEDTDVIANALNKST 375
+R V + D NL+RDKFL+EQI K +DGWVPL +L F RLA L+ D I ALNKS
Sbjct: 55 IRQVEYYFGDANLNRDKFLREQIGKNEDGWVPLSVLVTFKRLASLSTDLSEIVAALNKSE 114
Query: 376 SGLLEVSEDNKKVRRNPEQPLPEMNEELRKEICNRSIYAKGFAKDASLDDLLNYFKQFQE 555
GL+E+SED +RR+PE+P+PE NEE RKEI R+ YAKGF D+ + +LL++ + +
Sbjct: 115 EGLVEISEDKLSLRRHPERPIPEHNEERRKEIQERTAYAKGFPLDSQISELLDFAANYDK 174
Query: 556 VENVIMRRYVEKSTKKRLFKGSVFATFKTREQAEKFMNAKGHKYGDNELLTLWQEDYLQQ 735
V N+ MR++ +K TK FKGS+F TF+T++QA+ F+ + Y + ELL WQ DYL++
Sbjct: 175 VVNLTMRKHYDKPTKSYKFKGSIFLTFETKDQAKAFLEQEKIVYKERELLRKWQVDYLKE 234
Query: 736 KQEEYS 753
KQEEY+
Sbjct: 235 KQEEYA 240
>AY075257-1|AAL68124.1| 390|Drosophila melanogaster AT22034p
protein.
Length = 390
Score = 199 bits (485), Expect = 5e-51
Identities = 94/186 (50%), Positives = 130/186 (69%), Gaps = 1/186 (0%)
Frame = +1
Query: 199 LRPVNSFKSDVNLHRDKFLQEQI-KLDDGWVPLEILTKFNRLAKLTEDTDVIANALNKST 375
+R V + D NL+RDKFL+EQI K +DGWVPL +L F RLA L+ D I ALNKS
Sbjct: 55 IRQVEYYFGDANLNRDKFLREQIGKNEDGWVPLSVLVTFKRLASLSTDLSEIVAALNKSE 114
Query: 376 SGLLEVSEDNKKVRRNPEQPLPEMNEELRKEICNRSIYAKGFAKDASLDDLLNYFKQFQE 555
GL+E+SED +RR+PE+P+PE NEE RKEI R+ YAKGF D+ + +LL++ + +
Sbjct: 115 EGLVEISEDKLSLRRHPERPIPEHNEERRKEIQERTAYAKGFPLDSQISELLDFAANYDK 174
Query: 556 VENVIMRRYVEKSTKKRLFKGSVFATFKTREQAEKFMNAKGHKYGDNELLTLWQEDYLQQ 735
V N+ MR++ +K TK FKGS+F TF+T++QA+ F+ + Y + ELL WQ DYL++
Sbjct: 175 VVNLTMRKHYDKPTKSYKFKGSIFLTFETKDQAKAFLEQEKIVYKERELLRKWQVDYLKE 234
Query: 736 KQEEYS 753
KQEEY+
Sbjct: 235 KQEEYA 240
>AE014134-3230|AAN11073.1| 390|Drosophila melanogaster CG10922-PB,
isoform B protein.
Length = 390
Score = 199 bits (485), Expect = 5e-51
Identities = 94/186 (50%), Positives = 130/186 (69%), Gaps = 1/186 (0%)
Frame = +1
Query: 199 LRPVNSFKSDVNLHRDKFLQEQI-KLDDGWVPLEILTKFNRLAKLTEDTDVIANALNKST 375
+R V + D NL+RDKFL+EQI K +DGWVPL +L F RLA L+ D I ALNKS
Sbjct: 55 IRQVEYYFGDANLNRDKFLREQIGKNEDGWVPLSVLVTFKRLASLSTDLSEIVAALNKSE 114
Query: 376 SGLLEVSEDNKKVRRNPEQPLPEMNEELRKEICNRSIYAKGFAKDASLDDLLNYFKQFQE 555
GL+E+SED +RR+PE+P+PE NEE RKEI R+ YAKGF D+ + +LL++ + +
Sbjct: 115 EGLVEISEDKLSLRRHPERPIPEHNEERRKEIQERTAYAKGFPLDSQISELLDFAANYDK 174
Query: 556 VENVIMRRYVEKSTKKRLFKGSVFATFKTREQAEKFMNAKGHKYGDNELLTLWQEDYLQQ 735
V N+ MR++ +K TK FKGS+F TF+T++QA+ F+ + Y + ELL WQ DYL++
Sbjct: 175 VVNLTMRKHYDKPTKSYKFKGSIFLTFETKDQAKAFLEQEKIVYKERELLRKWQVDYLKE 234
Query: 736 KQEEYS 753
KQEEY+
Sbjct: 235 KQEEYA 240
>AE014134-3229|AAF53885.1| 390|Drosophila melanogaster CG10922-PA,
isoform A protein.
Length = 390
Score = 199 bits (485), Expect = 5e-51
Identities = 94/186 (50%), Positives = 130/186 (69%), Gaps = 1/186 (0%)
Frame = +1
Query: 199 LRPVNSFKSDVNLHRDKFLQEQI-KLDDGWVPLEILTKFNRLAKLTEDTDVIANALNKST 375
+R V + D NL+RDKFL+EQI K +DGWVPL +L F RLA L+ D I ALNKS
Sbjct: 55 IRQVEYYFGDANLNRDKFLREQIGKNEDGWVPLSVLVTFKRLASLSTDLSEIVAALNKSE 114
Query: 376 SGLLEVSEDNKKVRRNPEQPLPEMNEELRKEICNRSIYAKGFAKDASLDDLLNYFKQFQE 555
GL+E+SED +RR+PE+P+PE NEE RKEI R+ YAKGF D+ + +LL++ + +
Sbjct: 115 EGLVEISEDKLSLRRHPERPIPEHNEERRKEIQERTAYAKGFPLDSQISELLDFAANYDK 174
Query: 556 VENVIMRRYVEKSTKKRLFKGSVFATFKTREQAEKFMNAKGHKYGDNELLTLWQEDYLQQ 735
V N+ MR++ +K TK FKGS+F TF+T++QA+ F+ + Y + ELL WQ DYL++
Sbjct: 175 VVNLTMRKHYDKPTKSYKFKGSIFLTFETKDQAKAFLEQEKIVYKERELLRKWQVDYLKE 234
Query: 736 KQEEYS 753
KQEEY+
Sbjct: 235 KQEEYA 240
>U07652-1|AAA20518.1| 390|Drosophila melanogaster La/SS-B protein.
Length = 390
Score = 196 bits (479), Expect = 3e-50
Identities = 94/186 (50%), Positives = 128/186 (68%), Gaps = 1/186 (0%)
Frame = +1
Query: 199 LRPVNSFKSDVNLHRDKFLQEQI-KLDDGWVPLEILTKFNRLAKLTEDTDVIANALNKST 375
+R V + D NL+RDKFL+EQI K +DGWVPL +L F RLA L+ D I ALNKS
Sbjct: 55 IRQVEYYFGDANLNRDKFLREQIGKNEDGWVPLSVLVTFKRLASLSTDLSEIVAALNKSE 114
Query: 376 SGLLEVSEDNKKVRRNPEQPLPEMNEELRKEICNRSIYAKGFAKDASLDDLLNYFKQFQE 555
GL+E+SED +RR+PE+P+PE NEE RKEI R+ YAKGF D+ + +LL++ + +
Sbjct: 115 EGLVEISEDKLSLRRHPERPIPEHNEERRKEIQERTAYAKGFPLDSQISELLDFTANYDK 174
Query: 556 VENVIMRRYVEKSTKKRLFKGSVFATFKTREQAEKFMNAKGHKYGDNELLTLWQEDYLQQ 735
V N+ MR +K TK FKGS+F TF+T++QA+ F+ + Y + ELL WQ DYL++
Sbjct: 175 VVNLTMRNSYDKPTKSYKFKGSIFLTFETKDQAKAFLEQEKIVYKERELLRKWQVDYLKE 234
Query: 736 KQEEYS 753
KQEEY+
Sbjct: 235 KQEEYA 240
>AY061107-1|AAL28655.1| 595|Drosophila melanogaster LD09531p
protein.
Length = 595
Score = 66.5 bits (155), Expect = 5e-11
Identities = 49/149 (32%), Positives = 78/149 (52%)
Frame = +1
Query: 226 DVNLHRDKFLQEQIKLDDGWVPLEILTKFNRLAKLTEDTDVIANALNKSTSGLLEVSEDN 405
D NL +D+FL+ ++ D +VPLEI FN++ LT+D IA AL S S LLE+ E
Sbjct: 73 DANLSKDRFLRRYVE-QDPYVPLEIFLTFNKIKTLTQDVQQIAKAL--SNSQLLELDETE 129
Query: 406 KKVRRNPEQPLPEMNEELRKEICNRSIYAKGFAKDASLDDLLNYFKQFQEVENVIMRRYV 585
KV+R + LP+ ++++ ++++Y + +A+ D L F ++ V V + Y
Sbjct: 130 LKVKRRTK--LPD-----QRDVNDKTLYVEALPANATHDWLKEVFSRYGPVAYVSLPHY- 181
Query: 586 EKSTKKRLFKGSVFATFKTREQAEKFMNA 672
TKK K F F+ EK + A
Sbjct: 182 -PGTKK--IKEFAFIEFEKSGSLEKAVKA 207
>AF219009-1|AAF27644.1| 595|Drosophila melanogaster multi-sex-combs
protein.
Length = 595
Score = 66.5 bits (155), Expect = 5e-11
Identities = 49/149 (32%), Positives = 78/149 (52%)
Frame = +1
Query: 226 DVNLHRDKFLQEQIKLDDGWVPLEILTKFNRLAKLTEDTDVIANALNKSTSGLLEVSEDN 405
D NL +D+FL+ ++ D +VPLEI FN++ LT+D IA AL S S LLE+ E
Sbjct: 73 DANLSKDRFLRRYVE-QDPYVPLEIFLTFNKIKTLTQDVQQIAKAL--SNSQLLELDETE 129
Query: 406 KKVRRNPEQPLPEMNEELRKEICNRSIYAKGFAKDASLDDLLNYFKQFQEVENVIMRRYV 585
KV+R + LP+ ++++ ++++Y + +A+ D L F ++ V V + Y
Sbjct: 130 LKVKRRTK--LPD-----QRDVNDKTLYVEALPANATHDWLKEVFSRYGPVAYVSLPHY- 181
Query: 586 EKSTKKRLFKGSVFATFKTREQAEKFMNA 672
TKK K F F+ EK + A
Sbjct: 182 -PGTKK--IKEFAFIEFEKSGSLEKAVKA 207
>AE014298-1312|AAF46473.1| 595|Drosophila melanogaster CG12058-PA
protein.
Length = 595
Score = 66.5 bits (155), Expect = 5e-11
Identities = 49/149 (32%), Positives = 78/149 (52%)
Frame = +1
Query: 226 DVNLHRDKFLQEQIKLDDGWVPLEILTKFNRLAKLTEDTDVIANALNKSTSGLLEVSEDN 405
D NL +D+FL+ ++ D +VPLEI FN++ LT+D IA AL S S LLE+ E
Sbjct: 73 DANLSKDRFLRRYVE-QDPYVPLEIFLTFNKIKTLTQDVQQIAKAL--SNSQLLELDETE 129
Query: 406 KKVRRNPEQPLPEMNEELRKEICNRSIYAKGFAKDASLDDLLNYFKQFQEVENVIMRRYV 585
KV+R + LP+ ++++ ++++Y + +A+ D L F ++ V V + Y
Sbjct: 130 LKVKRRTK--LPD-----QRDVNDKTLYVEALPANATHDWLKEVFSRYGPVAYVSLPHY- 181
Query: 586 EKSTKKRLFKGSVFATFKTREQAEKFMNA 672
TKK K F F+ EK + A
Sbjct: 182 -PGTKK--IKEFAFIEFEKSGSLEKAVKA 207
>AE014297-4227|AAN14139.1| 965|Drosophila melanogaster CG14066-PB,
isoform B protein.
Length = 965
Score = 40.3 bits (90), Expect = 0.003
Identities = 34/104 (32%), Positives = 54/104 (51%), Gaps = 6/104 (5%)
Frame = +1
Query: 178 HSILKKNLRPVNSFKSDVNLHRDKFLQEQIKLDDGWVPLEILTKFNRLAKLTEDTDVIAN 357
+SI + + V + S NL D FL+ ++ +G++P+ ++ F+R+ LT D VI N
Sbjct: 19 NSIKEAIKKQVEYYFSVDNLTGDFFLRRKMD-PEGYIPVTLIASFHRVLALTTDVAVIVN 77
Query: 358 ALNKSTSGLLEVSEDNKKVRRN------PEQPLPEMNEELRKEI 471
A+ +S LE+ E KVR P +PE+NE K I
Sbjct: 78 AIKESDK--LELFE-GYKVRTKTTPTTWPITEVPEVNEGEPKAI 118
>AE014297-4226|AAF56783.3| 965|Drosophila melanogaster CG14066-PA,
isoform A protein.
Length = 965
Score = 40.3 bits (90), Expect = 0.003
Identities = 34/104 (32%), Positives = 54/104 (51%), Gaps = 6/104 (5%)
Frame = +1
Query: 178 HSILKKNLRPVNSFKSDVNLHRDKFLQEQIKLDDGWVPLEILTKFNRLAKLTEDTDVIAN 357
+SI + + V + S NL D FL+ ++ +G++P+ ++ F+R+ LT D VI N
Sbjct: 19 NSIKEAIKKQVEYYFSVDNLTGDFFLRRKMD-PEGYIPVTLIASFHRVLALTTDVAVIVN 77
Query: 358 ALNKSTSGLLEVSEDNKKVRRN------PEQPLPEMNEELRKEI 471
A+ +S LE+ E KVR P +PE+NE K I
Sbjct: 78 AIKESDK--LELFE-GYKVRTKTTPTTWPITEVPEVNEGEPKAI 118
>AE014297-4225|AAN14138.4| 1403|Drosophila melanogaster CG14066-PC,
isoform C protein.
Length = 1403
Score = 40.3 bits (90), Expect = 0.003
Identities = 34/104 (32%), Positives = 54/104 (51%), Gaps = 6/104 (5%)
Frame = +1
Query: 178 HSILKKNLRPVNSFKSDVNLHRDKFLQEQIKLDDGWVPLEILTKFNRLAKLTEDTDVIAN 357
+SI + + V + S NL D FL+ ++ +G++P+ ++ F+R+ LT D VI N
Sbjct: 457 NSIKEAIKKQVEYYFSVDNLTGDFFLRRKMD-PEGYIPVTLIASFHRVLALTTDVAVIVN 515
Query: 358 ALNKSTSGLLEVSEDNKKVRRN------PEQPLPEMNEELRKEI 471
A+ +S LE+ E KVR P +PE+NE K I
Sbjct: 516 AIKESDK--LELFE-GYKVRTKTTPTTWPITEVPEVNEGEPKAI 556
>AY113653-1|AAM29658.1| 269|Drosophila melanogaster SD18087p
protein.
Length = 269
Score = 39.5 bits (88), Expect = 0.006
Identities = 29/94 (30%), Positives = 51/94 (54%), Gaps = 2/94 (2%)
Frame = +1
Query: 178 HSILKKNLRPVNSFKSDVNLHRDKFLQEQIKLDDGWVPLEILTKFNRLAKLTEDTDVIAN 357
+SI + + V + S NL D FL+ ++ +G++P+ ++ F+R+ LT D VI N
Sbjct: 19 NSIKEAIKKQVEYYFSVDNLTGDFFLRRKMD-PEGYIPVTLIASFHRVLALTTDVAVIVN 77
Query: 358 ALNKSTSGLLEVSEDNK-KVRRNPEQ-PLPEMNE 453
A+ +S LE+ E K + + P P+ E+ E
Sbjct: 78 AIKESDK--LELFEGYKVRTKTTPTTWPITEVPE 109
>AF221108-1|AAF35862.1| 1403|Drosophila melanogaster La related
protein protein.
Length = 1403
Score = 39.5 bits (88), Expect = 0.006
Identities = 29/94 (30%), Positives = 51/94 (54%), Gaps = 2/94 (2%)
Frame = +1
Query: 178 HSILKKNLRPVNSFKSDVNLHRDKFLQEQIKLDDGWVPLEILTKFNRLAKLTEDTDVIAN 357
+SI + + V + S NL D FL+ ++ +G++P+ ++ F+R+ LT D VI N
Sbjct: 457 NSIKEAIKKQVEYYFSVDNLTGDFFLRRKMD-PEGYIPVTLIASFHRVLALTTDVAVIVN 515
Query: 358 ALNKSTSGLLEVSEDNK-KVRRNPEQ-PLPEMNE 453
A+ +S LE+ E K + + P P+ E+ E
Sbjct: 516 AIKESDK--LELFEGYKVRTKTTPTTWPITEVPE 547
>BT010118-1|AAQ22587.1| 961|Drosophila melanogaster AT27581p
protein.
Length = 961
Score = 37.5 bits (83), Expect = 0.025
Identities = 21/64 (32%), Positives = 36/64 (56%)
Frame = +1
Query: 232 NLHRDKFLQEQIKLDDGWVPLEILTKFNRLAKLTEDTDVIANALNKSTSGLLEVSEDNKK 411
NL D +L Q+ D +VP+ + +FN + KLT D ++I L +S + ++V + +
Sbjct: 277 NLANDTYLLSQMDSDQ-YVPIYTVARFNLVRKLTNDINLITEVLRESPN--VQVDDKGLR 333
Query: 412 VRRN 423
VR N
Sbjct: 334 VRPN 337
>AE014296-611|AAS64955.1| 958|Drosophila melanogaster CG11505-PC,
isoform C protein.
Length = 958
Score = 37.5 bits (83), Expect = 0.025
Identities = 21/64 (32%), Positives = 36/64 (56%)
Frame = +1
Query: 232 NLHRDKFLQEQIKLDDGWVPLEILTKFNRLAKLTEDTDVIANALNKSTSGLLEVSEDNKK 411
NL D +L Q+ D +VP+ + +FN + KLT D ++I L +S + ++V + +
Sbjct: 274 NLANDTYLLSQMDSDQ-YVPIYTVARFNLVRKLTNDINLITEVLRESPN--VQVDDKGLR 330
Query: 412 VRRN 423
VR N
Sbjct: 331 VRPN 334
>AE014296-610|AAF47745.1| 1521|Drosophila melanogaster CG11505-PA,
isoform A protein.
Length = 1521
Score = 37.5 bits (83), Expect = 0.025
Identities = 21/64 (32%), Positives = 36/64 (56%)
Frame = +1
Query: 232 NLHRDKFLQEQIKLDDGWVPLEILTKFNRLAKLTEDTDVIANALNKSTSGLLEVSEDNKK 411
NL D +L Q+ D +VP+ + +FN + KLT D ++I L +S + ++V + +
Sbjct: 274 NLANDTYLLSQMDSDQ-YVPIYTVARFNLVRKLTNDINLITEVLRESPN--VQVDDKGLR 330
Query: 412 VRRN 423
VR N
Sbjct: 331 VRPN 334
>AE014296-609|AAG22237.2| 1531|Drosophila melanogaster CG11505-PB,
isoform B protein.
Length = 1531
Score = 37.5 bits (83), Expect = 0.025
Identities = 21/64 (32%), Positives = 36/64 (56%)
Frame = +1
Query: 232 NLHRDKFLQEQIKLDDGWVPLEILTKFNRLAKLTEDTDVIANALNKSTSGLLEVSEDNKK 411
NL D +L Q+ D +VP+ + +FN + KLT D ++I L +S + ++V + +
Sbjct: 284 NLANDTYLLSQMDSDQ-YVPIYTVARFNLVRKLTNDINLITEVLRESPN--VQVDDKGLR 340
Query: 412 VRRN 423
VR N
Sbjct: 341 VRPN 344
>AY122226-1|AAM52738.1| 369|Drosophila melanogaster RE25373p
protein.
Length = 369
Score = 35.1 bits (77), Expect = 0.13
Identities = 28/111 (25%), Positives = 55/111 (49%), Gaps = 1/111 (0%)
Frame = +1
Query: 355 NALNKS-TSGLLEVSEDNKKVRRNPEQPLPEMNEELRKEICNRSIYAKGFAKDASLDDLL 531
N+++K T G E+ D KKV +P+ P + + I+ G + +L+D+
Sbjct: 81 NSVDKVLTQGTHEL--DGKKV--DPKVAFPRRAHP-KMVTRTKKIFVGGLSAPTTLEDVK 135
Query: 532 NYFKQFQEVENVIMRRYVEKSTKKRLFKGSVFATFKTREQAEKFMNAKGHK 684
+YF+QF +E+ ++ +K T + +G F TF++ + +K H+
Sbjct: 136 SYFEQFGPIEDAML--MFDKQTNRH--RGFGFVTFQSEDVVDKVCEIHFHE 182
>AE014296-2876|AAF49366.3| 369|Drosophila melanogaster CG32169-PA
protein.
Length = 369
Score = 35.1 bits (77), Expect = 0.13
Identities = 28/111 (25%), Positives = 55/111 (49%), Gaps = 1/111 (0%)
Frame = +1
Query: 355 NALNKS-TSGLLEVSEDNKKVRRNPEQPLPEMNEELRKEICNRSIYAKGFAKDASLDDLL 531
N+++K T G E+ D KKV +P+ P + + I+ G + +L+D+
Sbjct: 81 NSVDKVLTQGTHEL--DGKKV--DPKVAFPRRAHP-KMVTRTKKIFVGGLSAPTTLEDVK 135
Query: 532 NYFKQFQEVENVIMRRYVEKSTKKRLFKGSVFATFKTREQAEKFMNAKGHK 684
+YF+QF +E+ ++ +K T + +G F TF++ + +K H+
Sbjct: 136 SYFEQFGPIEDAML--MFDKQTNRH--RGFGFVTFQSEDVVDKVCEIHFHE 182
>BT021231-1|AAX33379.1| 408|Drosophila melanogaster RH31156p
protein.
Length = 408
Score = 31.1 bits (67), Expect = 2.1
Identities = 29/127 (22%), Positives = 56/127 (44%), Gaps = 1/127 (0%)
Frame = +1
Query: 373 TSGLLEVSEDNKKVRRNPEQPLPEMNEELRKEI-CNRSIYAKGFAKDASLDDLLNYFKQF 549
TS + S+ K +RN E+ EE+R E+ + +Y +G + +S+ + +
Sbjct: 95 TSSMTNASKARAKSKRN------ELLEEMRDEVYLDNQLYFQGVQRKSSVPEAEEL--KI 146
Query: 550 QEVENVIMRRYVEKSTKKRLFKGSVFATFKTREQAEKFMNAKGHKYGDNELLTLWQEDYL 729
E I + +EK K+ A F+T E+ +N YG +E L + +
Sbjct: 147 VESSESIQSQELEKVLKEENIDAEDEAFFETLPLIEEHINEVVANYGRDEKLLPQERKHN 206
Query: 730 QQKQEEY 750
++E++
Sbjct: 207 SIEEEQF 213
>AY119610-1|AAM50264.1| 825|Drosophila melanogaster LD34829p
protein.
Length = 825
Score = 31.1 bits (67), Expect = 2.1
Identities = 19/47 (40%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Frame = +1
Query: 382 LLEVSEDNKKVRRN-PEQPLPEMNEELRKEICNRSIYAKGFAKDASL 519
L E E N +++ + +Q LPE + +L + + +RSIY KGFA SL
Sbjct: 379 LCEYIESNIRLQEHFAQQKLPEPDHQLIR-VYSRSIYEKGFASVPSL 424
>AE013599-3511|AAF46929.2| 408|Drosophila melanogaster CG30190-PA
protein.
Length = 408
Score = 31.1 bits (67), Expect = 2.1
Identities = 29/127 (22%), Positives = 56/127 (44%), Gaps = 1/127 (0%)
Frame = +1
Query: 373 TSGLLEVSEDNKKVRRNPEQPLPEMNEELRKEI-CNRSIYAKGFAKDASLDDLLNYFKQF 549
TS + S+ K +RN E+ EE+R E+ + +Y +G + +S+ + +
Sbjct: 95 TSSMTNASKARAKSKRN------ELLEEMRDEVYLDNQLYFQGVQRKSSVPEAEEL--KI 146
Query: 550 QEVENVIMRRYVEKSTKKRLFKGSVFATFKTREQAEKFMNAKGHKYGDNELLTLWQEDYL 729
E I + +EK K+ A F+T E+ +N YG +E L + +
Sbjct: 147 VESSESIQSQELEKVLKEENIDAEDEAFFETLPLIEEHINEVVANYGRDEKLLPQERKHN 206
Query: 730 QQKQEEY 750
++E++
Sbjct: 207 SIEEEQF 213
>AE013599-2414|AAM68495.2| 810|Drosophila melanogaster CG6967-PB,
isoform B protein.
Length = 810
Score = 31.1 bits (67), Expect = 2.1
Identities = 19/47 (40%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Frame = +1
Query: 382 LLEVSEDNKKVRRN-PEQPLPEMNEELRKEICNRSIYAKGFAKDASL 519
L E E N +++ + +Q LPE + +L + + +RSIY KGFA SL
Sbjct: 364 LCEYIESNIRLQEHFAQQKLPEPDHQLIR-VYSRSIYEKGFASVPSL 409
>AE013599-2413|AAF57908.2| 825|Drosophila melanogaster CG6967-PA,
isoform A protein.
Length = 825
Score = 31.1 bits (67), Expect = 2.1
Identities = 19/47 (40%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Frame = +1
Query: 382 LLEVSEDNKKVRRN-PEQPLPEMNEELRKEICNRSIYAKGFAKDASL 519
L E E N +++ + +Q LPE + +L + + +RSIY KGFA SL
Sbjct: 379 LCEYIESNIRLQEHFAQQKLPEPDHQLIR-VYSRSIYEKGFASVPSL 424
>AE014297-3192|AAF56027.3| 1346|Drosophila melanogaster CG31158-PA,
isoform A protein.
Length = 1346
Score = 30.7 bits (66), Expect = 2.8
Identities = 20/74 (27%), Positives = 32/74 (43%)
Frame = +1
Query: 211 NSFKSDVNLHRDKFLQEQIKLDDGWVPLEILTKFNRLAKLTEDTDVIANALNKSTSGLLE 390
+S K + L + + Q+Q I +NR LT DT ++ L G
Sbjct: 358 DSVKREAKLLQKQQQQQQQTYQQQQQRDSINNSYNRKDSLTNDTLLMCEELEPDEEGEYV 417
Query: 391 VSEDNKKVRRNPEQ 432
+ EDNK+ R+ +Q
Sbjct: 418 LEEDNKQQRQRQQQ 431
>AE014297-3191|AAO41590.1| 1480|Drosophila melanogaster CG31158-PB,
isoform B protein.
Length = 1480
Score = 30.7 bits (66), Expect = 2.8
Identities = 20/74 (27%), Positives = 32/74 (43%)
Frame = +1
Query: 211 NSFKSDVNLHRDKFLQEQIKLDDGWVPLEILTKFNRLAKLTEDTDVIANALNKSTSGLLE 390
+S K + L + + Q+Q I +NR LT DT ++ L G
Sbjct: 358 DSVKREAKLLQKQQQQQQQTYQQQQQRDSINNSYNRKDSLTNDTLLMCEELEPDEEGEYV 417
Query: 391 VSEDNKKVRRNPEQ 432
+ EDNK+ R+ +Q
Sbjct: 418 LEEDNKQQRQRQQQ 431
>AE014298-2607|AAF48760.1| 607|Drosophila melanogaster CG15816-PA
protein.
Length = 607
Score = 29.5 bits (63), Expect = 6.5
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = -2
Query: 163 TSEAMTTTTLLRVKPIKKKLPQDLSKSAWARKTS 62
T+ TTTTL+ ++ K LPQ+LS S R+ +
Sbjct: 316 TTTTTTTTTLITLRAKSKTLPQNLSPSVVLREAA 349
>AY051730-1|AAK93154.1| 550|Drosophila melanogaster LD25919p
protein.
Length = 550
Score = 29.1 bits (62), Expect = 8.6
Identities = 34/159 (21%), Positives = 64/159 (40%)
Frame = +1
Query: 148 SSLQMLLASYHSILKKNLRPVNSFKSDVNLHRDKFLQEQIKLDDGWVPLEILTKFNRLAK 327
S ++ + Y ++ ++++PV + VN +K L+ G + T + K
Sbjct: 37 SQIEEIQNQYDTLRNESVKPVEAKIKKVNSQIEKLAANVRSLNVG-----LATADRNITK 91
Query: 328 LTEDTDVIANALNKSTSGLLEVSEDNKKVRRNPEQPLPEMNEELRKEICNRSIYAKGFAK 507
+T + + + + + L ++ED K + E EEL KEI +G AK
Sbjct: 92 ITGNNNNLRENIKAAEEKLKSLNEDRNKAK--------EKKEELEKEIEESEASIEG-AK 142
Query: 508 DASLDDLLNYFKQFQEVENVIMRRYVEKSTKKRLFKGSV 624
S D+ + + EN +E TK + G +
Sbjct: 143 SQS-SDIKKEIDEITKEENKRNIERIEIDTKLQAAAGKM 180
>AF186472-1|AAF01416.1| 1409|Drosophila melanogaster condensin subunit
SMC4 protein.
Length = 1409
Score = 29.1 bits (62), Expect = 8.6
Identities = 34/159 (21%), Positives = 64/159 (40%)
Frame = +1
Query: 148 SSLQMLLASYHSILKKNLRPVNSFKSDVNLHRDKFLQEQIKLDDGWVPLEILTKFNRLAK 327
S ++ + Y ++ ++++PV + VN +K L+ G + T + K
Sbjct: 896 SQIEEIQNQYDTLRNESVKPVEAKIKKVNSQIEKLAANVRSLNVG-----LATADRNITK 950
Query: 328 LTEDTDVIANALNKSTSGLLEVSEDNKKVRRNPEQPLPEMNEELRKEICNRSIYAKGFAK 507
+T + + + + + L ++ED K + E EEL KEI +G AK
Sbjct: 951 ITGNNNNLRENIKAAEEKLKSLNEDRNKAK--------EKKEELEKEIEESEASIEG-AK 1001
Query: 508 DASLDDLLNYFKQFQEVENVIMRRYVEKSTKKRLFKGSV 624
S D+ + + EN +E TK + G +
Sbjct: 1002 SQS-SDIKKEIDEITKEENKRNIERIEIDTKLQAAAGKM 1039
>AF185287-1|AAF13306.1| 1409|Drosophila melanogaster XCAP-C/SMC4
homolog Gluon protein.
Length = 1409
Score = 29.1 bits (62), Expect = 8.6
Identities = 20/102 (19%), Positives = 44/102 (43%)
Frame = +1
Query: 148 SSLQMLLASYHSILKKNLRPVNSFKSDVNLHRDKFLQEQIKLDDGWVPLEILTKFNRLAK 327
S ++ + Y ++ ++++PV + VN +K L+ G + T + K
Sbjct: 896 SQIEEIQNQYDTLRNESVKPVEAKIKKVNSQIEKLAANVRSLNVG-----LATADRNITK 950
Query: 328 LTEDTDVIANALNKSTSGLLEVSEDNKKVRRNPEQPLPEMNE 453
+T + + + + + L ++ED K + E+ EM E
Sbjct: 951 ITGNNNNLRENIKAAEEKLKSLNEDRNKAKEKKEELEKEMEE 992
>AE014134-2761|AAF53560.1| 1409|Drosophila melanogaster CG11397-PA
protein.
Length = 1409
Score = 29.1 bits (62), Expect = 8.6
Identities = 34/159 (21%), Positives = 64/159 (40%)
Frame = +1
Query: 148 SSLQMLLASYHSILKKNLRPVNSFKSDVNLHRDKFLQEQIKLDDGWVPLEILTKFNRLAK 327
S ++ + Y ++ ++++PV + VN +K L+ G + T + K
Sbjct: 896 SQIEEIQNQYDTLRNESVKPVEAKIKKVNSQIEKLAANVRSLNVG-----LATADRNITK 950
Query: 328 LTEDTDVIANALNKSTSGLLEVSEDNKKVRRNPEQPLPEMNEELRKEICNRSIYAKGFAK 507
+T + + + + + L ++ED K + E EEL KEI +G AK
Sbjct: 951 ITGNNNNLRENIKAAEEKLKSLNEDRNKAK--------EKKEELEKEIEESEASIEG-AK 1001
Query: 508 DASLDDLLNYFKQFQEVENVIMRRYVEKSTKKRLFKGSV 624
S D+ + + EN +E TK + G +
Sbjct: 1002 SQS-SDIKKEIDEITKEENKRNIERIEIDTKLQAAAGKM 1039
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,723,614
Number of Sequences: 53049
Number of extensions: 635186
Number of successful extensions: 1943
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 1836
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1935
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4352837424
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -