Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP16_F_K03
(1004 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 47 2e-05
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 47 2e-05
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 36 0.034
Z68008-5|CAD91696.1| 1160|Caenorhabditis elegans Hypothetical pr... 35 0.079
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 35 0.11
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 35 0.11
U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical p... 35 0.11
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 35 0.11
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 35 0.11
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 34 0.18
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 34 0.18
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 34 0.18
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 33 0.24
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 32 0.56
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 32 0.56
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 32 0.56
AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical ... 32 0.74
AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical ... 32 0.74
U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (gr... 31 0.98
Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical pr... 31 1.3
V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein ( Caeno... 31 1.3
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 31 1.3
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 31 1.3
J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein ( C.ele... 31 1.3
AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen stru... 31 1.3
D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like prot... 31 1.7
AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a... 31 1.7
AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a... 31 1.7
AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a... 31 1.7
AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a... 31 1.7
AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen prot... 31 1.7
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 30 2.3
Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical pr... 30 3.0
AC025721-11|AAK29900.1| 78|Caenorhabditis elegans Hypothetical... 30 3.0
Z77662-15|CAI79240.1| 255|Caenorhabditis elegans Hypothetical p... 29 4.0
AC024790-2|AAF60638.1| 220|Caenorhabditis elegans Ground-like (... 29 5.2
AL132860-21|CAB60518.2| 759|Caenorhabditis elegans Hypothetical... 29 6.9
AF057032-1|AAC13567.1| 759|Caenorhabditis elegans DNA topoisome... 29 6.9
Z72502-7|CAA96592.1| 140|Caenorhabditis elegans Hypothetical pr... 25 8.9
Z77662-14|CAI79239.1| 245|Caenorhabditis elegans Hypothetical p... 28 9.1
AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical... 28 9.1
AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein p... 28 9.1
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 28 9.1
AC024827-2|AAF60805.2| 254|Caenorhabditis elegans Hypothetical ... 28 9.1
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 47.2 bits (107), Expect = 2e-05
Identities = 28/88 (31%), Positives = 33/88 (37%)
Frame = +3
Query: 279 PPPPXPXRKTXFRPXLLSFCVXPAPXXXGXLSLAXNPXXPPXGVXRXGGGALXXFPXPLP 458
PPPP P +T P + P P G + P PP G+ GG P P P
Sbjct: 298 PPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGG-----MPPP-P 351
Query: 459 PPPXXVXRFFFFXPPPXXGPPVPXGXRG 542
PP + PPP PP P G
Sbjct: 352 PPRYPSAGPGMYPPPPPSRPPAPPSGHG 379
Score = 31.9 bits (69), Expect = 0.74
Identities = 19/54 (35%), Positives = 21/54 (38%)
Frame = +2
Query: 824 PXPXGLFSPXPPXXLXXPPXXRLLXPSGXGXGAXFPPXPPPXXAPPVXGXXPXP 985
P G++ P PP PP R P G PP PP PP G P P
Sbjct: 290 PPSSGMWPPPPP-----PPPGRT--PGPPGMPGMPPPPPPSRFGPPGMGGMPPP 336
Score = 30.3 bits (65), Expect = 2.3
Identities = 24/78 (30%), Positives = 25/78 (32%)
Frame = +3
Query: 273 GXPPPPXPXRKTXFRPXLLSFCVXPAPXXXGXLSLAXNPXXPPXGVXRXGGGALXXFPXP 452
G PPPP P R F P + P P G P PP G G P
Sbjct: 315 GMPPPPPPSR---FGPPGMG--GMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPS 369
Query: 453 LPPPPXXVXRFFFFXPPP 506
PP P PPP
Sbjct: 370 RPPAPPSGHGMIPPPPPP 387
Score = 29.5 bits (63), Expect = 4.0
Identities = 15/45 (33%), Positives = 16/45 (35%), Gaps = 2/45 (4%)
Frame = +3
Query: 876 PPXRAFWXPPGGGXXLXSPXTP--PRXXPPPXXXXXXPPXXRGAP 1004
PP W PP +P P P PPP PP G P
Sbjct: 290 PPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMP 334
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 47.2 bits (107), Expect = 2e-05
Identities = 28/88 (31%), Positives = 33/88 (37%)
Frame = +3
Query: 279 PPPPXPXRKTXFRPXLLSFCVXPAPXXXGXLSLAXNPXXPPXGVXRXGGGALXXFPXPLP 458
PPPP P +T P + P P G + P PP G+ GG P P P
Sbjct: 308 PPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGG-----MPPP-P 361
Query: 459 PPPXXVXRFFFFXPPPXXGPPVPXGXRG 542
PP + PPP PP P G
Sbjct: 362 PPRYPSAGPGMYPPPPPSRPPAPPSGHG 389
Score = 31.9 bits (69), Expect = 0.74
Identities = 19/54 (35%), Positives = 21/54 (38%)
Frame = +2
Query: 824 PXPXGLFSPXPPXXLXXPPXXRLLXPSGXGXGAXFPPXPPPXXAPPVXGXXPXP 985
P G++ P PP PP R P G PP PP PP G P P
Sbjct: 300 PPSSGMWPPPPP-----PPPGRT--PGPPGMPGMPPPPPPSRFGPPGMGGMPPP 346
Score = 30.3 bits (65), Expect = 2.3
Identities = 24/78 (30%), Positives = 25/78 (32%)
Frame = +3
Query: 273 GXPPPPXPXRKTXFRPXLLSFCVXPAPXXXGXLSLAXNPXXPPXGVXRXGGGALXXFPXP 452
G PPPP P R F P + P P G P PP G G P
Sbjct: 325 GMPPPPPPSR---FGPPGMG--GMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPS 379
Query: 453 LPPPPXXVXRFFFFXPPP 506
PP P PPP
Sbjct: 380 RPPAPPSGHGMIPPPPPP 397
Score = 29.5 bits (63), Expect = 4.0
Identities = 15/45 (33%), Positives = 16/45 (35%), Gaps = 2/45 (4%)
Frame = +3
Query: 876 PPXRAFWXPPGGGXXLXSPXTP--PRXXPPPXXXXXXPPXXRGAP 1004
PP W PP +P P P PPP PP G P
Sbjct: 300 PPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMP 344
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 36.3 bits (80), Expect = 0.034
Identities = 20/54 (37%), Positives = 20/54 (37%)
Frame = -3
Query: 984 GXGXXPXTGGAXXGGGXGGKXAPXPXPEGXKRRXXGGXXNXXGGXGEKRPXGXG 823
G G GG GGG GG AP P P GG GG G G G
Sbjct: 89 GGGCGGGGGGCGGGGGCGGGCAPPPPPPACGGGCGGGGGGCGGGCGGGGGGGCG 142
Score = 33.9 bits (74), Expect = 0.18
Identities = 16/38 (42%), Positives = 16/38 (42%)
Frame = -3
Query: 960 GGAXXGGGXGGKXAPXPXPEGXKRRXXGGXXNXXGGXG 847
GG GGG GG AP P P GG GG G
Sbjct: 40 GGCGGGGGCGGGCAPPPPPPACGGGCGGGGGGCGGGGG 77
Score = 33.5 bits (73), Expect = 0.24
Identities = 15/32 (46%), Positives = 15/32 (46%)
Frame = -2
Query: 295 GXGGGGXPSXGPXXPXCAXPXPPXPGGGGXXG 200
G GGGG G CA P PP GGG G
Sbjct: 93 GGGGGGCGGGGGCGGGCAPPPPPPACGGGCGG 124
Score = 31.5 bits (68), Expect = 0.98
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = -2
Query: 289 GGGGXPSXGPXXPXCAXPXPPXPGGGGXXG 200
GGGG G CA P PP GGG G
Sbjct: 38 GGGGCGGGGGCGGGCAPPPPPPACGGGCGG 67
>Z68008-5|CAD91696.1| 1160|Caenorhabditis elegans Hypothetical protein
R08B4.1b protein.
Length = 1160
Score = 35.1 bits (77), Expect = 0.079
Identities = 18/52 (34%), Positives = 20/52 (38%)
Frame = -3
Query: 1002 GPXXXRGXGXXPXTGGAXXGGGXGGKXAPXPXPEGXKRRXXGGXXNXXGGXG 847
GP G G GG+ GGG GG + G GG N GG G
Sbjct: 781 GPTGSSGGGGGGGNGGSGGGGGGGGGGSGGSGGGGSNSNSGGGGGNGGGGNG 832
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 34.7 bits (76), Expect = 0.11
Identities = 29/93 (31%), Positives = 33/93 (35%)
Frame = +3
Query: 264 PXLGXPPPPXPXRKTXFRPXLLSFCVXPAPXXXGXLSLAXNPXXPPXGVXRXGGGALXXF 443
P G PPPP P P P ++ P PP G+ GG
Sbjct: 708 PITGGPPPPPGLPPITGGPP-----PPPPPGGLPPITGGPPPPPPPGGLPPISGG----- 757
Query: 444 PXPLPPPPXXVXRFFFFXPPPXXGPPVPXGXRG 542
P P PPPP PPP PP P G +G
Sbjct: 758 PPPPPPPPGGCP------PPPP--PPPPGGFKG 782
Score = 31.1 bits (67), Expect = 1.3
Identities = 20/54 (37%), Positives = 21/54 (38%)
Frame = +2
Query: 824 PXPXGLFSPXPPXXLXXPPXXRLLXPSGXGXGAXFPPXPPPXXAPPVXGXXPXP 985
P P GL P PP L P G PP PPP PP+ G P P
Sbjct: 714 PPPPGL--PPITGGPPPPPPPGGLPPITGGP----PPPPPPGGLPPISGGPPPP 761
Score = 30.3 bits (65), Expect = 2.3
Identities = 16/43 (37%), Positives = 17/43 (39%)
Frame = +2
Query: 857 PXXLXXPPXXRLLXPSGXGXGAXFPPXPPPXXAPPVXGXXPXP 985
P PP L P G PP PPP PP+ G P P
Sbjct: 707 PPITGGPPPPPGLPPITGGP----PPPPPPGGLPPITGGPPPP 745
Score = 28.7 bits (61), Expect = 6.9
Identities = 18/51 (35%), Positives = 19/51 (37%)
Frame = +1
Query: 847 SXASXXVXXSPXXAPFGPLRXGGWXXFPPXPPPXXXPPRXGXXXXPPXXXG 999
S A + P P P GG PP PPP PP G PP G
Sbjct: 703 SSALPPITGGPPPPPGLPPITGGP---PPPPPPGGLPPITGGPPPPPPPGG 750
Score = 28.7 bits (61), Expect = 6.9
Identities = 29/88 (32%), Positives = 33/88 (37%)
Frame = +3
Query: 264 PXLGXPPPPXPXRKTXFRPXLLSFCVXPAPXXXGXLSLAXNPXXPPXGVXRXGGGALXXF 443
P G PPPP P P ++ P P G ++ P PP GG
Sbjct: 721 PITGGPPPPPP--PGGLPP--ITGGPPPPPPPGGLPPISGGPPPPPP----PPGGC---- 768
Query: 444 PXPLPPPPXXVXRFFFFXPPPXXGPPVP 527
P P PPPP F PPP PP P
Sbjct: 769 PPPPPPPPPG---GFKGGPPP---PPPP 790
Score = 28.3 bits (60), Expect = 9.1
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +1
Query: 928 PPXPPPXXXPPRXGXXXXPPXXXG 999
PP PPP PP G PP G
Sbjct: 743 PPPPPPGGLPPISGGPPPPPPPPG 766
Score = 28.3 bits (60), Expect = 9.1
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = -2
Query: 283 GGXPSXGPXXPXCAXPXPPXPGGGGXXG 200
GG P P C P PP P GG G
Sbjct: 756 GGPPPPPPPPGGCPPPPPPPPPGGFKGG 783
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 34.7 bits (76), Expect = 0.11
Identities = 29/93 (31%), Positives = 33/93 (35%)
Frame = +3
Query: 264 PXLGXPPPPXPXRKTXFRPXLLSFCVXPAPXXXGXLSLAXNPXXPPXGVXRXGGGALXXF 443
P G PPPP P P P ++ P PP G+ GG
Sbjct: 708 PITGGPPPPPGLPPITGGPP-----PPPPPGGLPPITGGPPPPPPPGGLPPISGG----- 757
Query: 444 PXPLPPPPXXVXRFFFFXPPPXXGPPVPXGXRG 542
P P PPPP PPP PP P G +G
Sbjct: 758 PPPPPPPPGGCP------PPPP--PPPPGGFKG 782
Score = 31.1 bits (67), Expect = 1.3
Identities = 20/54 (37%), Positives = 21/54 (38%)
Frame = +2
Query: 824 PXPXGLFSPXPPXXLXXPPXXRLLXPSGXGXGAXFPPXPPPXXAPPVXGXXPXP 985
P P GL P PP L P G PP PPP PP+ G P P
Sbjct: 714 PPPPGL--PPITGGPPPPPPPGGLPPITGGP----PPPPPPGGLPPISGGPPPP 761
Score = 30.3 bits (65), Expect = 2.3
Identities = 16/43 (37%), Positives = 17/43 (39%)
Frame = +2
Query: 857 PXXLXXPPXXRLLXPSGXGXGAXFPPXPPPXXAPPVXGXXPXP 985
P PP L P G PP PPP PP+ G P P
Sbjct: 707 PPITGGPPPPPGLPPITGGP----PPPPPPGGLPPITGGPPPP 745
Score = 28.7 bits (61), Expect = 6.9
Identities = 18/51 (35%), Positives = 19/51 (37%)
Frame = +1
Query: 847 SXASXXVXXSPXXAPFGPLRXGGWXXFPPXPPPXXXPPRXGXXXXPPXXXG 999
S A + P P P GG PP PPP PP G PP G
Sbjct: 703 SSALPPITGGPPPPPGLPPITGGP---PPPPPPGGLPPITGGPPPPPPPGG 750
Score = 28.7 bits (61), Expect = 6.9
Identities = 29/88 (32%), Positives = 33/88 (37%)
Frame = +3
Query: 264 PXLGXPPPPXPXRKTXFRPXLLSFCVXPAPXXXGXLSLAXNPXXPPXGVXRXGGGALXXF 443
P G PPPP P P ++ P P G ++ P PP GG
Sbjct: 721 PITGGPPPPPP--PGGLPP--ITGGPPPPPPPGGLPPISGGPPPPPP----PPGGC---- 768
Query: 444 PXPLPPPPXXVXRFFFFXPPPXXGPPVP 527
P P PPPP F PPP PP P
Sbjct: 769 PPPPPPPPPG---GFKGGPPP---PPPP 790
Score = 28.3 bits (60), Expect = 9.1
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +1
Query: 928 PPXPPPXXXPPRXGXXXXPPXXXG 999
PP PPP PP G PP G
Sbjct: 743 PPPPPPGGLPPISGGPPPPPPPPG 766
Score = 28.3 bits (60), Expect = 9.1
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = -2
Query: 283 GGXPSXGPXXPXCAXPXPPXPGGGGXXG 200
GG P P C P PP P GG G
Sbjct: 756 GGPPPPPPPPGGCPPPPPPPPPGGFKGG 783
>U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical
protein F25B5.7c protein.
Length = 282
Score = 34.7 bits (76), Expect = 0.11
Identities = 16/39 (41%), Positives = 17/39 (43%)
Frame = -1
Query: 1004 GGPXXXGGXXXXPXRGGXXXGGGXGGXKXXPPXRRGPKG 888
GGP GG P GG G GG PP + GP G
Sbjct: 172 GGPPGHGGMGGPPGHGGQGGPPGHGGMGGPPPGQGGPGG 210
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 34.7 bits (76), Expect = 0.11
Identities = 16/39 (41%), Positives = 17/39 (43%)
Frame = -1
Query: 1004 GGPXXXGGXXXXPXRGGXXXGGGXGGXKXXPPXRRGPKG 888
GGP GG P GG G GG PP + GP G
Sbjct: 452 GGPPGHGGMGGPPGHGGQGGPPGHGGMGGPPPGQGGPGG 490
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 34.7 bits (76), Expect = 0.11
Identities = 29/93 (31%), Positives = 33/93 (35%)
Frame = +3
Query: 264 PXLGXPPPPXPXRKTXFRPXLLSFCVXPAPXXXGXLSLAXNPXXPPXGVXRXGGGALXXF 443
P G PPPP P P P ++ P PP G+ GG
Sbjct: 291 PITGGPPPPPGLPPITGGPP-----PPPPPGGLPPITGGPPPPPPPGGLPPISGG----- 340
Query: 444 PXPLPPPPXXVXRFFFFXPPPXXGPPVPXGXRG 542
P P PPPP PPP PP P G +G
Sbjct: 341 PPPPPPPPGGCP------PPPP--PPPPGGFKG 365
Score = 31.1 bits (67), Expect = 1.3
Identities = 20/54 (37%), Positives = 21/54 (38%)
Frame = +2
Query: 824 PXPXGLFSPXPPXXLXXPPXXRLLXPSGXGXGAXFPPXPPPXXAPPVXGXXPXP 985
P P GL P PP L P G PP PPP PP+ G P P
Sbjct: 297 PPPPGL--PPITGGPPPPPPPGGLPPITGGP----PPPPPPGGLPPISGGPPPP 344
Score = 30.3 bits (65), Expect = 2.3
Identities = 16/43 (37%), Positives = 17/43 (39%)
Frame = +2
Query: 857 PXXLXXPPXXRLLXPSGXGXGAXFPPXPPPXXAPPVXGXXPXP 985
P PP L P G PP PPP PP+ G P P
Sbjct: 290 PPITGGPPPPPGLPPITGGP----PPPPPPGGLPPITGGPPPP 328
Score = 28.7 bits (61), Expect = 6.9
Identities = 18/51 (35%), Positives = 19/51 (37%)
Frame = +1
Query: 847 SXASXXVXXSPXXAPFGPLRXGGWXXFPPXPPPXXXPPRXGXXXXPPXXXG 999
S A + P P P GG PP PPP PP G PP G
Sbjct: 286 SSALPPITGGPPPPPGLPPITGGP---PPPPPPGGLPPITGGPPPPPPPGG 333
Score = 28.7 bits (61), Expect = 6.9
Identities = 29/88 (32%), Positives = 33/88 (37%)
Frame = +3
Query: 264 PXLGXPPPPXPXRKTXFRPXLLSFCVXPAPXXXGXLSLAXNPXXPPXGVXRXGGGALXXF 443
P G PPPP P P ++ P P G ++ P PP GG
Sbjct: 304 PITGGPPPPPP--PGGLPP--ITGGPPPPPPPGGLPPISGGPPPPPP----PPGGC---- 351
Query: 444 PXPLPPPPXXVXRFFFFXPPPXXGPPVP 527
P P PPPP F PPP PP P
Sbjct: 352 PPPPPPPPPG---GFKGGPPP---PPPP 373
Score = 28.3 bits (60), Expect = 9.1
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +1
Query: 928 PPXPPPXXXPPRXGXXXXPPXXXG 999
PP PPP PP G PP G
Sbjct: 326 PPPPPPGGLPPISGGPPPPPPPPG 349
Score = 28.3 bits (60), Expect = 9.1
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = -2
Query: 283 GGXPSXGPXXPXCAXPXPPXPGGGGXXG 200
GG P P C P PP P GG G
Sbjct: 339 GGPPPPPPPPGGCPPPPPPPPPGGFKGG 366
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 33.9 bits (74), Expect = 0.18
Identities = 21/60 (35%), Positives = 23/60 (38%)
Frame = +2
Query: 824 PXPXGLFSPXPPXXLXXPPXXRLLXPSGXGXGAXFPPXPPPXXAPPVXGXXPXPLXXXGP 1003
P P SP PP PP P G+ PP PPP +PP G P P P
Sbjct: 264 PPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSP-PPPPPPRGSPPT-GSLPPPQAGGSP 321
Score = 31.9 bits (69), Expect = 0.74
Identities = 29/97 (29%), Positives = 33/97 (34%), Gaps = 7/97 (7%)
Frame = +3
Query: 264 PXLGXPPPPXPXRKTXFRPXLLSFCVXPAPXXXGXLS--LAXNPXXPPXGVXRX--GGGA 431
P G PPPP P + + P L P P G +P PP G GG+
Sbjct: 232 PPAGSPPPPPPPKGS---PPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGS 288
Query: 432 LXX---FPXPLPPPPXXVXRFFFFXPPPXXGPPVPXG 533
P PPPP PP G P P G
Sbjct: 289 PPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAG 325
Score = 31.1 bits (67), Expect = 1.3
Identities = 18/54 (33%), Positives = 19/54 (35%)
Frame = +2
Query: 824 PXPXGLFSPXPPXXLXXPPXXRLLXPSGXGXGAXFPPXPPPXXAPPVXGXXPXP 985
P G SP PP PP R P G+ PP PP G P P
Sbjct: 247 PPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPP 300
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 33.9 bits (74), Expect = 0.18
Identities = 21/60 (35%), Positives = 23/60 (38%)
Frame = +2
Query: 824 PXPXGLFSPXPPXXLXXPPXXRLLXPSGXGXGAXFPPXPPPXXAPPVXGXXPXPLXXXGP 1003
P P SP PP PP P G+ PP PPP +PP G P P P
Sbjct: 285 PPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSP-PPPPPPRGSPPT-GSLPPPQAGGSP 342
Score = 31.9 bits (69), Expect = 0.74
Identities = 29/97 (29%), Positives = 33/97 (34%), Gaps = 7/97 (7%)
Frame = +3
Query: 264 PXLGXPPPPXPXRKTXFRPXLLSFCVXPAPXXXGXLS--LAXNPXXPPXGVXRX--GGGA 431
P G PPPP P + + P L P P G +P PP G GG+
Sbjct: 253 PPAGSPPPPPPPKGS---PPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGS 309
Query: 432 LXX---FPXPLPPPPXXVXRFFFFXPPPXXGPPVPXG 533
P PPPP PP G P P G
Sbjct: 310 PPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAG 346
Score = 31.1 bits (67), Expect = 1.3
Identities = 18/54 (33%), Positives = 19/54 (35%)
Frame = +2
Query: 824 PXPXGLFSPXPPXXLXXPPXXRLLXPSGXGXGAXFPPXPPPXXAPPVXGXXPXP 985
P G SP PP PP R P G+ PP PP G P P
Sbjct: 268 PPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPP 321
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 33.9 bits (74), Expect = 0.18
Identities = 21/60 (35%), Positives = 23/60 (38%)
Frame = +2
Query: 824 PXPXGLFSPXPPXXLXXPPXXRLLXPSGXGXGAXFPPXPPPXXAPPVXGXXPXPLXXXGP 1003
P P SP PP PP P G+ PP PPP +PP G P P P
Sbjct: 270 PPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSP-PPPPPPRGSPPT-GSLPPPQAGGSP 327
Score = 31.9 bits (69), Expect = 0.74
Identities = 29/97 (29%), Positives = 33/97 (34%), Gaps = 7/97 (7%)
Frame = +3
Query: 264 PXLGXPPPPXPXRKTXFRPXLLSFCVXPAPXXXGXLS--LAXNPXXPPXGVXRX--GGGA 431
P G PPPP P + + P L P P G +P PP G GG+
Sbjct: 238 PPAGSPPPPPPPKGS---PPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGS 294
Query: 432 LXX---FPXPLPPPPXXVXRFFFFXPPPXXGPPVPXG 533
P PPPP PP G P P G
Sbjct: 295 PPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAG 331
Score = 31.1 bits (67), Expect = 1.3
Identities = 18/54 (33%), Positives = 19/54 (35%)
Frame = +2
Query: 824 PXPXGLFSPXPPXXLXXPPXXRLLXPSGXGXGAXFPPXPPPXXAPPVXGXXPXP 985
P G SP PP PP R P G+ PP PP G P P
Sbjct: 253 PPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPP 306
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 33.5 bits (73), Expect = 0.24
Identities = 25/85 (29%), Positives = 27/85 (31%)
Frame = +3
Query: 279 PPPPXPXRKTXFRPXLLSFCVXPAPXXXGXLSLAXNPXXPPXGVXRXGGGALXXFPXPLP 458
PPPP P R PAP + P PP G P P P
Sbjct: 511 PPPPAPGPHKEQRRSTSKDPPRPAPPPVSSI-----PPPPPIAGLLAANGT--NVPIPPP 563
Query: 459 PPPXXVXRFFFFXPPPXXGPPVPXG 533
PPP PPP PP+ G
Sbjct: 564 PPPPLPQNLSGAPPPPPPPPPMLGG 588
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 32.3 bits (70), Expect = 0.56
Identities = 21/60 (35%), Positives = 21/60 (35%), Gaps = 1/60 (1%)
Frame = -3
Query: 999 PXXXRGXGXXPXTGGAXXGGGXGGKXAPXPXPEGXKRRXXGGXXNXXGGXG-EKRPXGXG 823
P G G GG G G GG AP P P G GG GG P G G
Sbjct: 23 PSAGGGGGGGGCGGGCGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGCAPPPAPCGGG 82
Score = 29.1 bits (62), Expect = 5.2
Identities = 15/36 (41%), Positives = 15/36 (41%)
Frame = -3
Query: 960 GGAXXGGGXGGKXAPXPXPEGXKRRXXGGXXNXXGG 853
GG G G GG AP P P G GG GG
Sbjct: 60 GGGGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGG 95
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 32.3 bits (70), Expect = 0.56
Identities = 21/60 (35%), Positives = 21/60 (35%), Gaps = 1/60 (1%)
Frame = -3
Query: 999 PXXXRGXGXXPXTGGAXXGGGXGGKXAPXPXPEGXKRRXXGGXXNXXGGXG-EKRPXGXG 823
P G G GG G G GG AP P P G GG GG P G G
Sbjct: 23 PSAGGGGGGGGCGGGCGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGCAPPPAPCGGG 82
Score = 29.1 bits (62), Expect = 5.2
Identities = 15/36 (41%), Positives = 15/36 (41%)
Frame = -3
Query: 960 GGAXXGGGXGGKXAPXPXPEGXKRRXXGGXXNXXGG 853
GG G G GG AP P P G GG GG
Sbjct: 60 GGGGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGG 95
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 32.3 bits (70), Expect = 0.56
Identities = 19/61 (31%), Positives = 24/61 (39%)
Frame = +3
Query: 345 PAPXXXGXLSLAXNPXXPPXGVXRXGGGALXXFPXPLPPPPXXVXRFFFFXPPPXXGPPV 524
P P L+ P PP + + G P P+PPPP PPP PP+
Sbjct: 1344 PPPPPSDDLTPVPPPPPPPPTMSKAPTGV----PLPVPPPPPLFSPSMILPPPP---PPL 1396
Query: 525 P 527
P
Sbjct: 1397 P 1397
>AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical
protein R148.5b protein.
Length = 505
Score = 31.9 bits (69), Expect = 0.74
Identities = 19/54 (35%), Positives = 20/54 (37%)
Frame = +2
Query: 824 PXPXGLFSPXPPXXLXXPPXXRLLXPSGXGXGAXFPPXPPPXXAPPVXGXXPXP 985
P P G F P PP PP + G G F P PP P G P P
Sbjct: 290 PPPFGFF-PPPPRGHFPPPPPHFM---GRGMPPPFMPPPPHFGMGPPRGFMPPP 339
>AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical
protein R148.5a protein.
Length = 528
Score = 31.9 bits (69), Expect = 0.74
Identities = 19/54 (35%), Positives = 20/54 (37%)
Frame = +2
Query: 824 PXPXGLFSPXPPXXLXXPPXXRLLXPSGXGXGAXFPPXPPPXXAPPVXGXXPXP 985
P P G F P PP PP + G G F P PP P G P P
Sbjct: 290 PPPFGFF-PPPPRGHFPPPPPHFM---GRGMPPPFMPPPPHFGMGPPRGFMPPP 339
>U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (grd
related) protein22 protein.
Length = 162
Score = 31.5 bits (68), Expect = 0.98
Identities = 13/30 (43%), Positives = 14/30 (46%)
Frame = -2
Query: 307 VFRXGXGGGGXPSXGPXXPXCAXPXPPXPG 218
+F GGGG P P CA P PP G
Sbjct: 19 LFPMAGGGGGGGGCAPAAPACAPPPPPMCG 48
Score = 28.3 bits (60), Expect = 9.1
Identities = 18/52 (34%), Positives = 18/52 (34%)
Frame = +3
Query: 396 PPXGVXRXGGGALXXFPXPLPPPPXXVXRFFFFXPPPXXGPPVPXGXRGXAR 551
P G GGG P PPPP PPP PP P G R
Sbjct: 21 PMAGGGGGGGGCAPAAPACAPPPPPMCG----CAPPPPPPPPPPMCGCGCGR 68
>Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical
protein W01B6.7 protein.
Length = 301
Score = 31.1 bits (67), Expect = 1.3
Identities = 12/33 (36%), Positives = 14/33 (42%)
Frame = -2
Query: 313 KXVFRXGXGGGGXPSXGPXXPXCAXPXPPXPGG 215
+ + G GGG G C P PP PGG
Sbjct: 79 RQAYSTGGAGGGGGGGGGGCDGCCNPGPPGPGG 111
>V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-2 coding for a collagen.
).
Length = 301
Score = 31.1 bits (67), Expect = 1.3
Identities = 12/33 (36%), Positives = 14/33 (42%)
Frame = -2
Query: 313 KXVFRXGXGGGGXPSXGPXXPXCAXPXPPXPGG 215
+ + G GGG G C P PP PGG
Sbjct: 79 RQAYSTGGAGGGGGGGGGGCDGCCNPGPPGPGG 111
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 31.1 bits (67), Expect = 1.3
Identities = 27/92 (29%), Positives = 29/92 (31%), Gaps = 2/92 (2%)
Frame = +3
Query: 279 PPPPXPXRKTXFRPXLLSFCVXPAPXXXGXLSLAXNPXXPPXGVXRXGGGALXXF--PXP 452
PPPP P T P A P PP G + P P
Sbjct: 574 PPPPPPSSGTRGIAPSRPLPQAPNYGTPENRPHAVPPPPPPPPPQSFGMAPISSAAPPPP 633
Query: 453 LPPPPXXVXRFFFFXPPPXXGPPVPXGXRGXA 548
PPPP + PPP PP P G G A
Sbjct: 634 PPPPPMGLPAVGAGAPPPPP-PPPPSGAGGPA 664
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 31.1 bits (67), Expect = 1.3
Identities = 27/92 (29%), Positives = 29/92 (31%), Gaps = 2/92 (2%)
Frame = +3
Query: 279 PPPPXPXRKTXFRPXLLSFCVXPAPXXXGXLSLAXNPXXPPXGVXRXGGGALXXF--PXP 452
PPPP P T P A P PP G + P P
Sbjct: 400 PPPPPPSSGTRGIAPSRPLPQAPNYGTPENRPHAVPPPPPPPPPQSFGMAPISSAAPPPP 459
Query: 453 LPPPPXXVXRFFFFXPPPXXGPPVPXGXRGXA 548
PPPP + PPP PP P G G A
Sbjct: 460 PPPPPMGLPAVGAGAPPPPP-PPPPSGAGGPA 490
>J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 2 (col-2) gene, complete
cds. ).
Length = 301
Score = 31.1 bits (67), Expect = 1.3
Identities = 12/33 (36%), Positives = 14/33 (42%)
Frame = -2
Query: 313 KXVFRXGXGGGGXPSXGPXXPXCAXPXPPXPGG 215
+ + G GGG G C P PP PGG
Sbjct: 79 RQAYSTGGAGGGGGGGGGGCDGCCNPGPPGPGG 111
>AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen
structural gene, probabledorsal and ventral cuticle
component, from embryo to adult,but maximal in dauer
(28.0 kD) (col-2) protein.
Length = 301
Score = 31.1 bits (67), Expect = 1.3
Identities = 12/33 (36%), Positives = 14/33 (42%)
Frame = -2
Query: 313 KXVFRXGXGGGGXPSXGPXXPXCAXPXPPXPGG 215
+ + G GGG G C P PP PGG
Sbjct: 79 RQAYSTGGAGGGGGGGGGGCDGCCNPGPPGPGG 111
>D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like protein
protein.
Length = 346
Score = 30.7 bits (66), Expect = 1.7
Identities = 17/37 (45%), Positives = 17/37 (45%)
Frame = -1
Query: 986 GGXXXXPXRGGXXXGGGXGGXKXXPPXRRGPKGAXXG 876
GG RGG GGG GG P R GP GA G
Sbjct: 208 GGRSRDGQRGGYNGGGGGGGGWGGPAQRGGP-GAYGG 243
>AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform b protein.
Length = 309
Score = 30.7 bits (66), Expect = 1.7
Identities = 17/37 (45%), Positives = 17/37 (45%)
Frame = -1
Query: 986 GGXXXXPXRGGXXXGGGXGGXKXXPPXRRGPKGAXXG 876
GG RGG GGG GG P R GP GA G
Sbjct: 170 GGRSRDGQRGGYNGGGGGGGGWGGPAQRGGP-GAYGG 205
>AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform c protein.
Length = 308
Score = 30.7 bits (66), Expect = 1.7
Identities = 17/37 (45%), Positives = 17/37 (45%)
Frame = -1
Query: 986 GGXXXXPXRGGXXXGGGXGGXKXXPPXRRGPKGAXXG 876
GG RGG GGG GG P R GP GA G
Sbjct: 170 GGRSRDGQRGGYNGGGGGGGGWGGPAQRGGP-GAYGG 205
>AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform d protein.
Length = 347
Score = 30.7 bits (66), Expect = 1.7
Identities = 17/37 (45%), Positives = 17/37 (45%)
Frame = -1
Query: 986 GGXXXXPXRGGXXXGGGXGGXKXXPPXRRGPKGAXXG 876
GG RGG GGG GG P R GP GA G
Sbjct: 208 GGRSRDGQRGGYNGGGGGGGGWGGPAQRGGP-GAYGG 243
>AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform a protein.
Length = 346
Score = 30.7 bits (66), Expect = 1.7
Identities = 17/37 (45%), Positives = 17/37 (45%)
Frame = -1
Query: 986 GGXXXXPXRGGXXXGGGXGGXKXXPPXRRGPKGAXXG 876
GG RGG GGG GG P R GP GA G
Sbjct: 208 GGRSRDGQRGGYNGGGGGGGGWGGPAQRGGP-GAYGG 243
>AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen protein
51 protein.
Length = 435
Score = 30.7 bits (66), Expect = 1.7
Identities = 18/48 (37%), Positives = 19/48 (39%), Gaps = 2/48 (4%)
Frame = -3
Query: 984 GXGXXPXTGGAXXGGGXGG--KXAPXPXPEGXKRRXXGGXXNXXGGXG 847
G G GG GGG GG + AP P GG N GG G
Sbjct: 367 GGGGAAAGGGYNAGGGGGGAPQAAPAPQAAPAPAAPAGGGYNAGGGGG 414
Score = 30.7 bits (66), Expect = 1.7
Identities = 14/32 (43%), Positives = 15/32 (46%)
Frame = -2
Query: 304 FRXGXGGGGXPSXGPXXPXCAXPXPPXPGGGG 209
+ G GGGG P P A P P P GGG
Sbjct: 377 YNAGGGGGGAPQAAPAPQ--AAPAPAAPAGGG 406
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 30.3 bits (65), Expect = 2.3
Identities = 13/28 (46%), Positives = 14/28 (50%)
Frame = +3
Query: 444 PXPLPPPPXXVXRFFFFXPPPXXGPPVP 527
P PLP PP + F PPP PP P
Sbjct: 40 PPPLPCPPPPICPPQFCPPPPMCPPPPP 67
>Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical
protein F02D10.1 protein.
Length = 316
Score = 29.9 bits (64), Expect = 3.0
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = -2
Query: 295 GXGGGGXPSXGPXXPXCAXPXPPXPGG 215
G GGG G C P PP PGG
Sbjct: 100 GGGGGEAAGGGGGCTGCCNPGPPGPGG 126
Score = 28.7 bits (61), Expect = 6.9
Identities = 26/77 (33%), Positives = 27/77 (35%)
Frame = -2
Query: 427 PPPXRXTPXGGXXGXMAXDNXPXXXGAGXTQXESNXGRKXVFRXGXGGGGXPSXGPXXPX 248
PPP + P G G D P G G S G G G G P GP P
Sbjct: 159 PPPCQPCP-AGPPGPPGPDGTPGEPG-GPGPAGSPAGPS-----GPGPAGPP--GPAGPP 209
Query: 247 CAXPXPPXPGGGGXXGA 197
P PGG G GA
Sbjct: 210 GNDGQPGQPGGPGQDGA 226
>AC025721-11|AAK29900.1| 78|Caenorhabditis elegans Hypothetical
protein Y48G8AL.12 protein.
Length = 78
Score = 29.9 bits (64), Expect = 3.0
Identities = 15/34 (44%), Positives = 16/34 (47%), Gaps = 2/34 (5%)
Frame = -2
Query: 307 VFRXGXGGGGXPSXG--PXXPXCAXPXPPXPGGG 212
+F GGGG G P P CA P P GGG
Sbjct: 18 LFPSAGGGGGGCGCGAPPPPPACAPPPAPACGGG 51
>Z77662-15|CAI79240.1| 255|Caenorhabditis elegans Hypothetical
protein F47B8.14 protein.
Length = 255
Score = 29.5 bits (63), Expect = 4.0
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +2
Query: 905 GXGXGAXFPPXPPPXXAPPVXGXXPXP 985
G G G PP PPP A P P P
Sbjct: 33 GGGGGDAAPPPPPPADAAPAPAPAPEP 59
>AC024790-2|AAF60638.1| 220|Caenorhabditis elegans Ground-like (grd
related) protein 5 protein.
Length = 220
Score = 29.1 bits (62), Expect = 5.2
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = -2
Query: 286 GGGXPSXGPXXPXCAXPXPPXPGGGG 209
GGG P C P PP P GGG
Sbjct: 20 GGGSSCGCSAPPACPPPPPPSPCGGG 45
>AL132860-21|CAB60518.2| 759|Caenorhabditis elegans Hypothetical
protein Y56A3A.27 protein.
Length = 759
Score = 28.7 bits (61), Expect = 6.9
Identities = 14/39 (35%), Positives = 15/39 (38%)
Frame = -1
Query: 1004 GGPXXXGGXXXXPXRGGXXXGGGXGGXKXXPPXRRGPKG 888
GGP GG P G GGG G P P+G
Sbjct: 616 GGPGGPGGGGGPPRGPGGGGGGGPTGPPAPPKPPAKPRG 654
>AF057032-1|AAC13567.1| 759|Caenorhabditis elegans DNA topoisomerase
III protein.
Length = 759
Score = 28.7 bits (61), Expect = 6.9
Identities = 14/39 (35%), Positives = 15/39 (38%)
Frame = -1
Query: 1004 GGPXXXGGXXXXPXRGGXXXGGGXGGXKXXPPXRRGPKG 888
GGP GG P G GGG G P P+G
Sbjct: 616 GGPGGPGGGGGPPRGPGGGGGGGPTGPPAPPKPPAKPRG 654
>Z72502-7|CAA96592.1| 140|Caenorhabditis elegans Hypothetical
protein C08B6.10 protein.
Length = 140
Score = 25.0 bits (52), Expect(2) = 8.9
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = +3
Query: 501 PPXXGPPVPXGXRG 542
PP GPP P G RG
Sbjct: 126 PPPPGPPPPFGWRG 139
Score = 21.8 bits (44), Expect(2) = 8.9
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = +3
Query: 498 PPPXXGPPVP 527
PPP GPP P
Sbjct: 120 PPPPWGPPPP 129
>Z77662-14|CAI79239.1| 245|Caenorhabditis elegans Hypothetical
protein F47B8.13 protein.
Length = 245
Score = 28.3 bits (60), Expect = 9.1
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +2
Query: 911 GXGAXFPPXPPPXXAPPVXGXXPXP 985
G G PP PPP A P P P
Sbjct: 32 GAGVEAPPPPPPADAAPAPAPEPAP 56
>AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical
protein Y116A8C.32 protein.
Length = 699
Score = 28.3 bits (60), Expect = 9.1
Identities = 14/36 (38%), Positives = 16/36 (44%)
Frame = +3
Query: 420 GGGALXXFPXPLPPPPXXVXRFFFFXPPPXXGPPVP 527
G G P P+PPP F PPP PP+P
Sbjct: 652 GSGGGSSMPMPVPPPGGLGG----FMPPPPPPPPMP 683
>AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein
protein.
Length = 699
Score = 28.3 bits (60), Expect = 9.1
Identities = 14/36 (38%), Positives = 16/36 (44%)
Frame = +3
Query: 420 GGGALXXFPXPLPPPPXXVXRFFFFXPPPXXGPPVP 527
G G P P+PPP F PPP PP+P
Sbjct: 652 GSGGGSSMPMPVPPPGGLGG----FMPPPPPPPPMP 683
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 28.3 bits (60), Expect = 9.1
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = +3
Query: 459 PPPXXVXRFFFFXPPPXXGPPVPXG 533
PPP + + PPP GPP P G
Sbjct: 707 PPPPGIPGYPPAPPPPGVGPPPPQG 731
>AC024827-2|AAF60805.2| 254|Caenorhabditis elegans Hypothetical
protein Y55F3AR.2 protein.
Length = 254
Score = 28.3 bits (60), Expect = 9.1
Identities = 18/45 (40%), Positives = 18/45 (40%)
Frame = -3
Query: 987 RGXGXXPXTGGAXXGGGXGGKXAPXPXPEGXKRRXXGGXXNXXGG 853
RG G P GA GG G AP P P R GG GG
Sbjct: 213 RGGGPAP---GAPRAGGSGAGGAPRPPPPAGP-RAFGGSGQRLGG 253
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,285,569
Number of Sequences: 27780
Number of extensions: 279919
Number of successful extensions: 2711
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 823
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2146
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2636483976
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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