Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP16_F_J24
(924 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 32 0.67
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 32 0.67
AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily a... 32 0.67
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 32 0.67
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 31 0.88
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 31 0.88
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 31 1.2
Z70309-6|CAA94360.1| 324|Caenorhabditis elegans Hypothetical pr... 29 4.7
U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (gr... 29 4.7
AF067611-2|AAW88406.1| 2302|Caenorhabditis elegans Cadherin fami... 29 4.7
Z81034-4|CAB02729.1| 541|Caenorhabditis elegans Hypothetical pr... 29 6.2
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 29 6.2
Z77662-15|CAI79240.1| 255|Caenorhabditis elegans Hypothetical p... 29 6.2
Z77662-14|CAI79239.1| 245|Caenorhabditis elegans Hypothetical p... 29 6.2
Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical pr... 29 6.2
Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical pr... 29 6.2
Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical pr... 29 6.2
U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical pr... 29 6.2
U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical pr... 29 6.2
Z66565-6|CAA91483.1| 165|Caenorhabditis elegans Hypothetical pr... 28 8.2
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 28 8.2
U97017-2|AAB52359.1| 281|Caenorhabditis elegans Hypothetical pr... 28 8.2
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 28 8.2
U40802-3|AAM81105.1| 369|Caenorhabditis elegans Dense body prot... 28 8.2
U40802-2|AAM81104.1| 1010|Caenorhabditis elegans Dense body prot... 28 8.2
U40802-1|AAM81106.1| 999|Caenorhabditis elegans Dense body prot... 28 8.2
U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (gr... 28 8.2
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 28 8.2
U13875-4|AAK67215.1| 1510|Caenorhabditis elegans Set (trithorax/... 28 8.2
U13875-3|AAK67214.1| 1507|Caenorhabditis elegans Set (trithorax/... 28 8.2
J04804-1|AAA28002.1| 1010|Caenorhabditis elegans protein ( C.ele... 28 8.2
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 31.9 bits (69), Expect = 0.67
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = -1
Query: 540 PPPPPPXXXXKXPXPPPXP 484
PPPPPP P PPP P
Sbjct: 759 PPPPPPPGGCPPPPPPPPP 777
Score = 31.5 bits (68), Expect = 0.88
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = -1
Query: 540 PPPPPPXXXXKXPXPPPXP 484
PPPPPP P PPP P
Sbjct: 772 PPPPPPGGFKGGPPPPPPP 790
Score = 31.1 bits (67), Expect = 1.2
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = -1
Query: 540 PPPPPPXXXXKXPXPPPXP 484
PPPPPP P PPP P
Sbjct: 758 PPPPPPPPGGCPPPPPPPP 776
Score = 30.7 bits (66), Expect = 1.5
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = -1
Query: 540 PPPPPPXXXXKXPXPPPXP 484
PPPPPP K PPP P
Sbjct: 771 PPPPPPPGGFKGGPPPPPP 789
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 31.9 bits (69), Expect = 0.67
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = -1
Query: 540 PPPPPPXXXXKXPXPPPXP 484
PPPPPP P PPP P
Sbjct: 759 PPPPPPPGGCPPPPPPPPP 777
Score = 31.5 bits (68), Expect = 0.88
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = -1
Query: 540 PPPPPPXXXXKXPXPPPXP 484
PPPPPP P PPP P
Sbjct: 772 PPPPPPGGFKGGPPPPPPP 790
Score = 31.1 bits (67), Expect = 1.2
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = -1
Query: 540 PPPPPPXXXXKXPXPPPXP 484
PPPPPP P PPP P
Sbjct: 758 PPPPPPPPGGCPPPPPPPP 776
Score = 30.7 bits (66), Expect = 1.5
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = -1
Query: 540 PPPPPPXXXXKXPXPPPXP 484
PPPPPP K PPP P
Sbjct: 771 PPPPPPPGGFKGGPPPPPP 789
>AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily
assigned gene nameprotein 268 protein.
Length = 881
Score = 31.9 bits (69), Expect = 0.67
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = -1
Query: 540 PPPPPPXXXXKXPXPPP 490
PPPPPP K P PPP
Sbjct: 86 PPPPPPPPTLKAPPPPP 102
Score = 28.7 bits (61), Expect = 6.2
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = -1
Query: 540 PPPPPPXXXXKXPXPPPXP 484
PPPPPP PPP P
Sbjct: 84 PPPPPPPPPPTLKAPPPPP 102
Score = 28.3 bits (60), Expect = 8.2
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = -1
Query: 540 PPPPPPXXXXKXPXPPPXP 484
PPPPPP PPP P
Sbjct: 70 PPPPPPLISILQQAPPPPP 88
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 31.9 bits (69), Expect = 0.67
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = -1
Query: 540 PPPPPPXXXXKXPXPPPXP 484
PPPPPP P PPP P
Sbjct: 342 PPPPPPPGGCPPPPPPPPP 360
Score = 31.5 bits (68), Expect = 0.88
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = -1
Query: 540 PPPPPPXXXXKXPXPPPXP 484
PPPPPP P PPP P
Sbjct: 355 PPPPPPGGFKGGPPPPPPP 373
Score = 31.1 bits (67), Expect = 1.2
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = -1
Query: 540 PPPPPPXXXXKXPXPPPXP 484
PPPPPP P PPP P
Sbjct: 341 PPPPPPPPGGCPPPPPPPP 359
Score = 30.7 bits (66), Expect = 1.5
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = -1
Query: 540 PPPPPPXXXXKXPXPPPXP 484
PPPPPP K PPP P
Sbjct: 354 PPPPPPPGGFKGGPPPPPP 372
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 31.5 bits (68), Expect = 0.88
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = -1
Query: 540 PPPPPPXXXXKXPXPPPXP 484
PPPPPP P PPP P
Sbjct: 1342 PPPPPPPSDDLTPVPPPPP 1360
Score = 28.7 bits (61), Expect = 6.2
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = -1
Query: 540 PPPPPPXXXXKXPXPPPXP 484
PPPPP P PPP P
Sbjct: 1344 PPPPPSDDLTPVPPPPPPP 1362
Score = 28.3 bits (60), Expect = 8.2
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = -3
Query: 541 PPPPPXXXXXXXPXXPPPXP 482
PPPPP P PPP P
Sbjct: 1342 PPPPPPPSDDLTPVPPPPPP 1361
Score = 28.3 bits (60), Expect = 8.2
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = -3
Query: 541 PPPPPXXXXXXXPXXPPPXP 482
PPPPP P PPP P
Sbjct: 1344 PPPPPSDDLTPVPPPPPPPP 1363
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 31.5 bits (68), Expect = 0.88
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = -1
Query: 540 PPPPPPXXXXKXPXPPPXP 484
PPPPPP P PPP P
Sbjct: 577 PPPPPPPPMLGGPPPPPPP 595
Score = 31.5 bits (68), Expect = 0.88
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = -1
Query: 540 PPPPPPXXXXKXPXPPPXP 484
PPPPPP P PPP P
Sbjct: 578 PPPPPPPMLGGPPPPPPPP 596
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 31.1 bits (67), Expect = 1.2
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = -1
Query: 540 PPPPPPXXXXKXPXPPPXP 484
PPPPPP P PPP P
Sbjct: 64 PPPPPPPPPMCPPPPPPMP 82
Score = 29.5 bits (63), Expect = 3.6
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -1
Query: 540 PPPPPPXXXXKXPXPPP 490
PPPPPP P PPP
Sbjct: 63 PPPPPPPPPPMCPPPPP 79
>Z70309-6|CAA94360.1| 324|Caenorhabditis elegans Hypothetical
protein R102.6 protein.
Length = 324
Score = 29.1 bits (62), Expect = 4.7
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -1
Query: 537 PPPPPXXXXKXPXPPPXP 484
PPPPP P PPP P
Sbjct: 252 PPPPPPCPMPIPCPPPPP 269
>U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (grd
related) protein22 protein.
Length = 162
Score = 29.1 bits (62), Expect = 4.7
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -1
Query: 537 PPPPPXXXXKXPXPPPXP 484
PPPPP P PPP P
Sbjct: 41 PPPPPMCGCAPPPPPPPP 58
Score = 28.3 bits (60), Expect = 8.2
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = -3
Query: 541 PPPPPXXXXXXXPXXPPPXP 482
PPPPP P PPP P
Sbjct: 41 PPPPPMCGCAPPPPPPPPPP 60
>AF067611-2|AAW88406.1| 2302|Caenorhabditis elegans Cadherin family
protein 10 protein.
Length = 2302
Score = 29.1 bits (62), Expect = 4.7
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -1
Query: 537 PPPPPXXXXKXPXPPPXP 484
PPPPP P PPP P
Sbjct: 2278 PPPPPGYMHTPPLPPPPP 2295
>Z81034-4|CAB02729.1| 541|Caenorhabditis elegans Hypothetical
protein C15C6.3 protein.
Length = 541
Score = 28.7 bits (61), Expect = 6.2
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = -1
Query: 540 PPPPPPXXXXKXPXPPPXP 484
PPPPPP PPP P
Sbjct: 478 PPPPPPPENEPEEFPPPPP 496
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 28.7 bits (61), Expect = 6.2
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = -1
Query: 540 PPPPPPXXXXKXPXPPPXP 484
PPPPPP PPP P
Sbjct: 538 PPPPPPVGMANGGPPPPPP 556
Score = 28.3 bits (60), Expect = 8.2
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = -1
Query: 540 PPPPPPXXXXKXPXPPPXP 484
PPPP P P PPP P
Sbjct: 489 PPPPMPSINGHAPNPPPPP 507
Score = 28.3 bits (60), Expect = 8.2
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = -3
Query: 541 PPPPPXXXXXXXPXXPPPXP 482
PPPPP P PPP P
Sbjct: 539 PPPPPVGMANGGPPPPPPLP 558
>Z77662-15|CAI79240.1| 255|Caenorhabditis elegans Hypothetical
protein F47B8.14 protein.
Length = 255
Score = 28.7 bits (61), Expect = 6.2
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = -1
Query: 540 PPPPPPXXXXKXPXPPPXP 484
PPPPPP P P P P
Sbjct: 41 PPPPPPADAAPAPAPAPEP 59
>Z77662-14|CAI79239.1| 245|Caenorhabditis elegans Hypothetical
protein F47B8.13 protein.
Length = 245
Score = 28.7 bits (61), Expect = 6.2
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = -1
Query: 540 PPPPPPXXXXKXPXPPPXP 484
PPPPPP P P P P
Sbjct: 38 PPPPPPADAAPAPAPEPAP 56
>Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical
protein ZC168.5 protein.
Length = 172
Score = 28.7 bits (61), Expect = 6.2
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = -1
Query: 540 PPPPPPXXXXKXPXPPPXP 484
PPPPP + P PPP P
Sbjct: 42 PPPPPCGGGYEAPPPPPPP 60
Score = 28.3 bits (60), Expect = 8.2
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = -1
Query: 540 PPPPPPXXXXKXPXPPPXP 484
PPPPPP PPP P
Sbjct: 40 PPPPPPPCGGGYEAPPPPP 58
Score = 28.3 bits (60), Expect = 8.2
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = -1
Query: 540 PPPPPPXXXXKXPXPPPXP 484
PPPPPP PPP P
Sbjct: 41 PPPPPPCGGGYEAPPPPPP 59
>Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical
protein C33B4.3b protein.
Length = 993
Score = 28.7 bits (61), Expect = 6.2
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = -1
Query: 540 PPPPPPXXXXKXPXPPPXP 484
PPPPPP PPP P
Sbjct: 794 PPPPPPLPPISSGAPPPPP 812
>Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical
protein C33B4.3a protein.
Length = 1110
Score = 28.7 bits (61), Expect = 6.2
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = -1
Query: 540 PPPPPPXXXXKXPXPPPXP 484
PPPPPP PPP P
Sbjct: 794 PPPPPPLPPISSGAPPPPP 812
>U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical
protein R144.4a protein.
Length = 360
Score = 28.7 bits (61), Expect = 6.2
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = -1
Query: 540 PPPPPPXXXXKXPXPPPXP 484
PPPPP P PPP P
Sbjct: 159 PPPPPVSVPSSKPTPPPPP 177
Score = 28.3 bits (60), Expect = 8.2
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = -3
Query: 541 PPPPPXXXXXXXPXXPPPXP 482
PPPPP P PPP P
Sbjct: 159 PPPPPVSVPSSKPTPPPPPP 178
>U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical
protein R144.4b protein.
Length = 362
Score = 28.7 bits (61), Expect = 6.2
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = -1
Query: 540 PPPPPPXXXXKXPXPPPXP 484
PPPPP P PPP P
Sbjct: 159 PPPPPVSVPSSKPTPPPPP 177
Score = 28.3 bits (60), Expect = 8.2
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = -3
Query: 541 PPPPPXXXXXXXPXXPPPXP 482
PPPPP P PPP P
Sbjct: 159 PPPPPVSVPSSKPTPPPPPP 178
>Z66565-6|CAA91483.1| 165|Caenorhabditis elegans Hypothetical
protein T04F8.8 protein.
Length = 165
Score = 28.3 bits (60), Expect = 8.2
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = -1
Query: 540 PPPPPPXXXXKXPXPPPXP 484
PPPPPP P P P P
Sbjct: 98 PPPPPPTQPEPEPEPRPEP 116
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 28.3 bits (60), Expect = 8.2
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = -1
Query: 540 PPPPPPXXXXKXPXPPPXP 484
P PPPP P PPP P
Sbjct: 285 PRPPPPPSSGMWPPPPPPP 303
Score = 28.3 bits (60), Expect = 8.2
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -1
Query: 537 PPPPPXXXXKXPXPPPXP 484
PPPPP P PPP P
Sbjct: 287 PPPPPSSGMWPPPPPPPP 304
Score = 28.3 bits (60), Expect = 8.2
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = -1
Query: 540 PPPPPPXXXXKXPXPPPXP 484
PPPPPP PPP P
Sbjct: 334 PPPPPPGMRYPGGMPPPPP 352
>U97017-2|AAB52359.1| 281|Caenorhabditis elegans Hypothetical
protein F47B3.4 protein.
Length = 281
Score = 28.3 bits (60), Expect = 8.2
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -1
Query: 537 PPPPPXXXXKXPXPPPXP 484
PPPPP K P PP P
Sbjct: 52 PPPPPPPAPKVPEPPKAP 69
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 28.3 bits (60), Expect = 8.2
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = -3
Query: 541 PPPPPXXXXXXXPXXPPPXP 482
PPPPP P PPP P
Sbjct: 134 PPPPPPHYPPPPPHYPPPPP 153
>U40802-3|AAM81105.1| 369|Caenorhabditis elegans Dense body protein
1, isoform b protein.
Length = 369
Score = 28.3 bits (60), Expect = 8.2
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = -1
Query: 540 PPPPPPXXXXKXPXPPPXP 484
P PPPP P PPP P
Sbjct: 148 PRPPPPVELSPPPRPPPPP 166
>U40802-2|AAM81104.1| 1010|Caenorhabditis elegans Dense body protein
1, isoform a protein.
Length = 1010
Score = 28.3 bits (60), Expect = 8.2
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = -1
Query: 540 PPPPPPXXXXKXPXPPPXP 484
P PPPP P PPP P
Sbjct: 789 PRPPPPVELSPPPRPPPPP 807
>U40802-1|AAM81106.1| 999|Caenorhabditis elegans Dense body protein
1, isoform c protein.
Length = 999
Score = 28.3 bits (60), Expect = 8.2
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = -1
Query: 540 PPPPPPXXXXKXPXPPPXP 484
P PPPP P PPP P
Sbjct: 789 PRPPPPVELSPPPRPPPPP 807
>U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (grd
related) protein 6 protein.
Length = 240
Score = 28.3 bits (60), Expect = 8.2
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -1
Query: 537 PPPPPXXXXKXPXPPPXP 484
PPPPP P PPP P
Sbjct: 72 PPPPPPPMPCPPPPPPMP 89
Score = 28.3 bits (60), Expect = 8.2
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = -1
Query: 540 PPPPPPXXXXKXPXPPPXP 484
PPPPPP P P P P
Sbjct: 73 PPPPPPMPCPPPPPPMPRP 91
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 28.3 bits (60), Expect = 8.2
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = -1
Query: 540 PPPPPPXXXXKXPXPPPXP 484
P PPPP P PPP P
Sbjct: 295 PRPPPPPSSGMWPPPPPPP 313
Score = 28.3 bits (60), Expect = 8.2
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -1
Query: 537 PPPPPXXXXKXPXPPPXP 484
PPPPP P PPP P
Sbjct: 297 PPPPPSSGMWPPPPPPPP 314
Score = 28.3 bits (60), Expect = 8.2
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = -1
Query: 540 PPPPPPXXXXKXPXPPPXP 484
PPPPPP PPP P
Sbjct: 344 PPPPPPGMRYPGGMPPPPP 362
>U13875-4|AAK67215.1| 1510|Caenorhabditis elegans Set
(trithorax/polycomb) domaincontaining protein 2, isoform
c protein.
Length = 1510
Score = 28.3 bits (60), Expect = 8.2
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = -1
Query: 540 PPPPPPXXXXKXPXPPPXP 484
P PPPP P PPP P
Sbjct: 296 PIPPPPIKEESPPPPPPPP 314
>U13875-3|AAK67214.1| 1507|Caenorhabditis elegans Set
(trithorax/polycomb) domaincontaining protein 2, isoform
a protein.
Length = 1507
Score = 28.3 bits (60), Expect = 8.2
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = -1
Query: 540 PPPPPPXXXXKXPXPPPXP 484
P PPPP P PPP P
Sbjct: 296 PIPPPPIKEESPPPPPPPP 314
>J04804-1|AAA28002.1| 1010|Caenorhabditis elegans protein (
C.elegans vinculin (deb-1) gene, complete cds. ).
Length = 1010
Score = 28.3 bits (60), Expect = 8.2
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = -1
Query: 540 PPPPPPXXXXKXPXPPPXP 484
P PPPP P PPP P
Sbjct: 789 PRPPPPVELSPPPRPPPPP 807
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,429,163
Number of Sequences: 27780
Number of extensions: 192993
Number of successful extensions: 3409
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 806
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2307
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2370744068
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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