Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP16_F_J22
         (865 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z78543-1|CAB01753.2| 1170|Caenorhabditis elegans Hypothetical pr...    32   0.46 
AF067936-4|AAC19210.1|  903|Caenorhabditis elegans Hypothetical ...    31   1.1  
Z81095-1|CAB03158.1|  667|Caenorhabditis elegans Hypothetical pr...    28   7.5  
AL110485-26|CAB60359.3|  779|Caenorhabditis elegans Hypothetical...    28   9.9  

>Z78543-1|CAB01753.2| 1170|Caenorhabditis elegans Hypothetical
           protein F29G6.1 protein.
          Length = 1170

 Score = 32.3 bits (70), Expect = 0.46
 Identities = 11/12 (91%), Positives = 12/12 (100%)
 Frame = +1

Query: 472 PVCGTDNITYNN 507
           PVCGTDN+TYNN
Sbjct: 27  PVCGTDNVTYNN 38


>AF067936-4|AAC19210.1|  903|Caenorhabditis elegans Hypothetical
           protein C24G6.2a protein.
          Length = 903

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 15/49 (30%), Positives = 22/49 (44%)
 Frame = +3

Query: 15  CTDLRLXXGIPXXDFXCLARNQTTRTQLTCT*IEAKVISILHFQDIMDK 161
           C D  L  GIP  DF    +N T  T +    ++ K   + + Q +M K
Sbjct: 232 CVDPDLSQGIPVPDFDVHVKNSTISTSIGSDMMDRKCRYVYYLQSVMSK 280


>Z81095-1|CAB03158.1|  667|Caenorhabditis elegans Hypothetical
           protein F59F4.1 protein.
          Length = 667

 Score = 28.3 bits (60), Expect = 7.5
 Identities = 12/29 (41%), Positives = 15/29 (51%)
 Frame = -3

Query: 491 LSVPQTGLYSAVNWAATNALLNCRRHCGG 405
           L V  +GL S V+W     +  CR  CGG
Sbjct: 380 LHVLSSGLKSLVSWDTAQGIEQCRLACGG 408


>AL110485-26|CAB60359.3|  779|Caenorhabditis elegans Hypothetical
           protein Y46G5A.17 protein.
          Length = 779

 Score = 27.9 bits (59), Expect = 9.9
 Identities = 12/25 (48%), Positives = 14/25 (56%)
 Frame = +2

Query: 266 LWLGAYHPASKAVPWARIFPRSIPR 340
           LWLG  H  SKA P    F  ++PR
Sbjct: 150 LWLGVLHIISKAGPMLHSFQGALPR 174


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,042,191
Number of Sequences: 27780
Number of extensions: 216949
Number of successful extensions: 579
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 552
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 579
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2160943708
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)