Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP16_F_J18
         (1023 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL512286-4|CAI40802.1|  325|Homo sapiens novel protein protein.        31   8.9  
AL512286-3|CAI40801.1|  349|Homo sapiens novel protein protein.        31   8.9  
AL512286-2|CAI40800.1|  185|Homo sapiens novel protein protein.        31   8.9  
AK000723-1|BAA91341.1|  185|Homo sapiens protein ( Homo sapiens ...    31   8.9  

>AL512286-4|CAI40802.1|  325|Homo sapiens novel protein protein.
          Length = 325

 Score = 30.7 bits (66), Expect = 8.9
 Identities = 15/45 (33%), Positives = 18/45 (40%)
 Frame = +1

Query: 814 SPPXXXXXXPXSSXP*XXFXHAPGXXXRLSAXXGPPFXXPPPXHP 948
           SPP      P S+ P   +  +     R S    PPF  PPP  P
Sbjct: 281 SPPSGLSDEPQSASPSPSYMWSSSAPPRYSPPYYPPFEKPPPYSP 325


>AL512286-3|CAI40801.1|  349|Homo sapiens novel protein protein.
          Length = 349

 Score = 30.7 bits (66), Expect = 8.9
 Identities = 15/45 (33%), Positives = 18/45 (40%)
 Frame = +1

Query: 814 SPPXXXXXXPXSSXP*XXFXHAPGXXXRLSAXXGPPFXXPPPXHP 948
           SPP      P S+ P   +  +     R S    PPF  PPP  P
Sbjct: 305 SPPSGLSDEPQSASPSPSYMWSSSAPPRYSPPYYPPFEKPPPYSP 349


>AL512286-2|CAI40800.1|  185|Homo sapiens novel protein protein.
          Length = 185

 Score = 30.7 bits (66), Expect = 8.9
 Identities = 15/45 (33%), Positives = 18/45 (40%)
 Frame = +1

Query: 814 SPPXXXXXXPXSSXP*XXFXHAPGXXXRLSAXXGPPFXXPPPXHP 948
           SPP      P S+ P   +  +     R S    PPF  PPP  P
Sbjct: 141 SPPSGLSDEPQSASPSPSYMWSSSAPPRYSPPYYPPFEKPPPYSP 185


>AK000723-1|BAA91341.1|  185|Homo sapiens protein ( Homo sapiens
           cDNA FLJ20716 fis, clone HEP19742. ).
          Length = 185

 Score = 30.7 bits (66), Expect = 8.9
 Identities = 15/45 (33%), Positives = 18/45 (40%)
 Frame = +1

Query: 814 SPPXXXXXXPXSSXP*XXFXHAPGXXXRLSAXXGPPFXXPPPXHP 948
           SPP      P S+ P   +  +     R S    PPF  PPP  P
Sbjct: 141 SPPSGLSDEPQSASPSPSYMWSSSAPPRYSPPYYPPFEKPPPYSP 185


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,218,880
Number of Sequences: 237096
Number of extensions: 1415964
Number of successful extensions: 2322
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1945
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2319
length of database: 76,859,062
effective HSP length: 91
effective length of database: 55,283,326
effective search space used: 13765548174
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)