Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP16_F_J17
(894 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE013599-1807|AAF58309.1| 346|Drosophila melanogaster CG6704-PA... 126 3e-29
AE014297-888|AAF54344.1| 316|Drosophila melanogaster CG16733-PA... 91 1e-18
AY060679-1|AAL28227.1| 338|Drosophila melanogaster GH11818p pro... 88 2e-17
AE013599-3656|AAF47039.2| 364|Drosophila melanogaster CG5428-PA... 88 2e-17
BT012452-1|AAS93723.1| 318|Drosophila melanogaster RE64763p pro... 84 3e-16
AE013599-3657|AAF47040.2| 331|Drosophila melanogaster CG5431-PA... 84 3e-16
AY119624-1|AAM50278.1| 291|Drosophila melanogaster LP01553p pro... 81 2e-15
AF520715-1|AAM55244.1| 4723|Drosophila melanogaster MICAL long i... 33 0.53
AE014297-1071|AAO41537.1| 4723|Drosophila melanogaster CG33208-P... 33 0.53
AE014297-1070|AAO41536.1| 4723|Drosophila melanogaster CG33208-P... 33 0.53
AE014297-1069|AAO41535.1| 4723|Drosophila melanogaster CG33208-P... 33 0.53
AE014297-1068|AAO41534.1| 4723|Drosophila melanogaster CG33208-P... 33 0.53
AE014297-1067|AAO41533.1| 4723|Drosophila melanogaster CG33208-P... 33 0.53
BT009937-1|AAQ22406.1| 1872|Drosophila melanogaster SD06328p pro... 31 2.1
AE014134-3335|AAF53958.1| 982|Drosophila melanogaster CG12050-P... 31 2.1
AE013599-3254|AAF46751.2| 1831|Drosophila melanogaster CG30263-P... 31 2.1
BT010040-1|AAQ22509.1| 759|Drosophila melanogaster LD41948p pro... 31 2.8
BT003572-1|AAO39576.1| 547|Drosophila melanogaster LD43576p pro... 31 2.8
AE014296-3387|AAF51614.2| 480|Drosophila melanogaster CG32425-P... 31 2.8
AE014296-3385|AAN12134.1| 759|Drosophila melanogaster CG32425-P... 31 2.8
AE014296-3384|AAF51618.2| 759|Drosophila melanogaster CG32425-P... 31 2.8
>AE013599-1807|AAF58309.1| 346|Drosophila melanogaster CG6704-PA
protein.
Length = 346
Score = 126 bits (305), Expect = 3e-29
Identities = 66/170 (38%), Positives = 97/170 (57%), Gaps = 14/170 (8%)
Frame = +1
Query: 268 YQDHAEDIYNLEIRPDDIWVIPFSRSGTTWLQELVWLVNNNLDYAAAASQPLNKRYAYIE 447
Y+D AE YN E RPDD+W+ RSGTTW QEL+WLV N LD+ A +PL +R+ + E
Sbjct: 48 YKDEAERYYNFEARPDDVWIATVPRSGTTWTQELIWLVANGLDFEHAQERPLTERFPFFE 107
Query: 448 -----HVTQKSDAAKKMPQSSRP---EQRATFESFETLPNLP--SPRYVKSHLPLSCLPP 597
H K + ++ S+ ++ +E L +P R++K+H P S +PP
Sbjct: 108 FPLFVHPKIKEELQEENRDSAEALEFIEKIARPGYEALSEIPRSQRRFIKTHFPFSLMPP 167
Query: 598 ALLD-TAKVFYIARDPRDVAVSLYFADKLF---GYFSDEVTFKEFWDLFK 735
++L+ KV Y+ RDP+DVAVS Y ++LF GY D F+ +W F+
Sbjct: 168 SVLEKKCKVIYVVRDPKDVAVSYYHLNRLFRTQGYVGD---FERYWHYFQ 214
Score = 38.3 bits (85), Expect = 0.014
Identities = 17/41 (41%), Positives = 25/41 (60%)
Frame = +3
Query: 129 KNMALRFPHEIKPVTEEEDLILKKYYKGYSRPFVRVGAPGY 251
+N L+FPHEI+ V E + L ++ G FV+VG+ GY
Sbjct: 2 ENTPLKFPHEIRDVEESTNAELLDHFHGERTGFVQVGSEGY 42
>AE014297-888|AAF54344.1| 316|Drosophila melanogaster CG16733-PA
protein.
Length = 316
Score = 91.5 bits (217), Expect = 1e-18
Identities = 57/166 (34%), Positives = 87/166 (52%), Gaps = 2/166 (1%)
Frame = +1
Query: 241 PRDISLHQGYQDHAEDIYNLEIRPDDIWVIPFSRSGTTWLQELVWLVNNNLDYAAAASQP 420
P + + Y + E I +L + DD+W++ + R+G+TW QE+VWL+ + LDY AA Q
Sbjct: 31 PDQFIIPRKYVELGESIRSLPVYQDDVWMVSYPRTGSTWAQEMVWLLGHQLDY-VAAEQD 89
Query: 421 LNKRYAYIEHVTQKSDAAKKMPQSSRPEQRATFESFETLPNLPSPRYVKSHLPLSCLPPA 600
L R IE A + Q+ + + + NLP PR+ +SHLP LP
Sbjct: 90 LRLRSPLIE-----LSALFSIDHHETVAQKFG-NTVDLVRNLPRPRFARSHLPWPLLPEQ 143
Query: 601 LLDTAK--VFYIARDPRDVAVSLYFADKLFGYFSDEVTFKEFWDLF 732
+T K + Y AR+P+D+ VS Y KL + + F++F DLF
Sbjct: 144 -FETVKPRIVYTARNPKDLCVSYYHYFKLLHGMNGD--FEQFVDLF 186
>AY060679-1|AAL28227.1| 338|Drosophila melanogaster GH11818p
protein.
Length = 338
Score = 87.8 bits (208), Expect = 2e-17
Identities = 48/144 (33%), Positives = 72/144 (50%), Gaps = 1/144 (0%)
Frame = +1
Query: 238 EPRDISLHQGYQDHAEDIYNLEIRPDDIWVIPFSRSGTTWLQELVWLVNNNLDYAAAASQ 417
E R L +Q + +Y+ E+R DD+W++ + GTTW+QEL WLV N D+ A S
Sbjct: 43 EQRFCRLADTFQPVLDRVYDFEVRDDDVWIVTLPKCGTTWMQELAWLVINECDFETAKSV 102
Query: 418 PLNKRYAYIEHVTQKSDAAKKMPQSSRPEQRATFESFETLPNLPSPRYVKSHLPLSCLPP 597
L R ++E + +P + A LPSPR +KSHLP LP
Sbjct: 103 DLTHRSPFLEF----NGVVPNVPHDTIAAANA----------LPSPRLIKSHLPAWMLPR 148
Query: 598 ALLD-TAKVFYIARDPRDVAVSLY 666
+ K+ Y+ R+P+D A+S +
Sbjct: 149 QIWSKRPKIIYVYRNPKDAAISYF 172
>AE013599-3656|AAF47039.2| 364|Drosophila melanogaster CG5428-PA
protein.
Length = 364
Score = 87.8 bits (208), Expect = 2e-17
Identities = 48/144 (33%), Positives = 72/144 (50%), Gaps = 1/144 (0%)
Frame = +1
Query: 238 EPRDISLHQGYQDHAEDIYNLEIRPDDIWVIPFSRSGTTWLQELVWLVNNNLDYAAAASQ 417
E R L +Q + +Y+ E+R DD+W++ + GTTW+QEL WLV N D+ A S
Sbjct: 69 EQRFCRLADTFQPVLDRVYDFEVRDDDVWIVTLPKCGTTWMQELAWLVINECDFETAKSV 128
Query: 418 PLNKRYAYIEHVTQKSDAAKKMPQSSRPEQRATFESFETLPNLPSPRYVKSHLPLSCLPP 597
L R ++E + +P + A LPSPR +KSHLP LP
Sbjct: 129 DLTHRSPFLEF----NGVVPNVPHDTIAAANA----------LPSPRLIKSHLPAWMLPR 174
Query: 598 ALLD-TAKVFYIARDPRDVAVSLY 666
+ K+ Y+ R+P+D A+S +
Sbjct: 175 QIWSKRPKIIYVYRNPKDAAISYF 198
>BT012452-1|AAS93723.1| 318|Drosophila melanogaster RE64763p
protein.
Length = 318
Score = 83.8 bits (198), Expect = 3e-16
Identities = 49/156 (31%), Positives = 82/156 (52%), Gaps = 1/156 (0%)
Frame = +1
Query: 289 IYNLEIRPDDIWVIPFSRSGTTWLQELVWLVNNNLDYAAAASQPLNKRYAYIEHVTQKSD 468
++++++R DD+W++ + GTTW+QEL+WL+ NN D+ A ++ R ++E
Sbjct: 43 VHDMKLRDDDVWIVTLPKCGTTWMQELLWLLLNNCDFEGALAKDQELRTPFLEF------ 96
Query: 469 AAKKMPQSSRPEQRATFESFETLPNLPSPRYVKSHLPLSCLPPALLD-TAKVFYIARDPR 645
+R SF + +L SPR +KSHL L+ LP L + KV Y++R+P
Sbjct: 97 GYSVFHDPNR--------SFGPIEDLKSPRLIKSHLSLALLPSKLWEGKNKVIYVSRNPL 148
Query: 646 DVAVSLYFADKLFGYFSDEVTFKEFWDLFKRD*FFT 753
D VS Y+ FG+ + + F ++ D F T
Sbjct: 149 DSYVSRYYHGVSFGFNYGKSLHQYFDEVLASDDFPT 184
>AE013599-3657|AAF47040.2| 331|Drosophila melanogaster CG5431-PA
protein.
Length = 331
Score = 83.8 bits (198), Expect = 3e-16
Identities = 49/156 (31%), Positives = 82/156 (52%), Gaps = 1/156 (0%)
Frame = +1
Query: 289 IYNLEIRPDDIWVIPFSRSGTTWLQELVWLVNNNLDYAAAASQPLNKRYAYIEHVTQKSD 468
++++++R DD+W++ + GTTW+QEL+WL+ NN D+ A ++ R ++E
Sbjct: 38 VHDMKLRDDDVWIVTLPKCGTTWMQELLWLLLNNCDFEGALAKDQELRTPFLEF------ 91
Query: 469 AAKKMPQSSRPEQRATFESFETLPNLPSPRYVKSHLPLSCLPPALLD-TAKVFYIARDPR 645
+R SF + +L SPR +KSHL L+ LP L + KV Y++R+P
Sbjct: 92 GYSVFHDPNR--------SFGPIEDLKSPRLIKSHLSLALLPSKLWEGKNKVIYVSRNPL 143
Query: 646 DVAVSLYFADKLFGYFSDEVTFKEFWDLFKRD*FFT 753
D VS Y+ FG+ + + F ++ D F T
Sbjct: 144 DSYVSRYYHGVSFGFNYGKSLHQYFDEVLASDDFPT 179
>AY119624-1|AAM50278.1| 291|Drosophila melanogaster LP01553p
protein.
Length = 291
Score = 81.4 bits (192), Expect = 2e-15
Identities = 49/153 (32%), Positives = 79/153 (51%), Gaps = 1/153 (0%)
Frame = +1
Query: 298 LEIRPDDIWVIPFSRSGTTWLQELVWLVNNNLDYAAAASQPLNKRYAYIEHVTQKSDAAK 477
+++R DD+W++ + GTTW+QEL+WL+ NN D+ A ++ R ++E
Sbjct: 1 MKLRDDDVWIVTLPKCGTTWMQELLWLLLNNCDFEGALAKDQELRTPFLEF------GYS 54
Query: 478 KMPQSSRPEQRATFESFETLPNLPSPRYVKSHLPLSCLPPALLD-TAKVFYIARDPRDVA 654
+R SF + +L SPR +KSHL L+ LP L + KV Y++R+P D
Sbjct: 55 VFHDPNR--------SFGPIEDLKSPRLIKSHLSLALLPSKLWEGKNKVIYVSRNPLDSY 106
Query: 655 VSLYFADKLFGYFSDEVTFKEFWDLFKRD*FFT 753
VS Y+ FG+ + + F ++ D F T
Sbjct: 107 VSRYYHGVSFGFNYGKSLHQYFDEVLASDDFPT 139
>AF520715-1|AAM55244.1| 4723|Drosophila melanogaster MICAL long
isoform protein.
Length = 4723
Score = 33.1 bits (72), Expect = 0.53
Identities = 21/94 (22%), Positives = 43/94 (45%), Gaps = 1/94 (1%)
Frame = +1
Query: 223 RLSALEPRDISLHQGYQDHAEDIYNLEIRPDDIWVIPFSRSGTTWLQELVWLVN-NNLDY 399
+LS L+P D+ QD + +Y I+P+ + VIP T ++ + + +D+
Sbjct: 2365 KLSKLDPEDMP--PSVQDLLQQVYQKNIQPELVEVIPVEGKQTLRFPSMLAEEDVDEVDH 2422
Query: 400 AAAASQPLNKRYAYIEHVTQKSDAAKKMPQSSRP 501
+ + + + VT+ D A+ +P +P
Sbjct: 2423 SKEGIKKIETAPEEVRKVTEPEDVARVIPSPIKP 2456
>AE014297-1071|AAO41537.1| 4723|Drosophila melanogaster CG33208-PH,
isoform H protein.
Length = 4723
Score = 33.1 bits (72), Expect = 0.53
Identities = 21/94 (22%), Positives = 43/94 (45%), Gaps = 1/94 (1%)
Frame = +1
Query: 223 RLSALEPRDISLHQGYQDHAEDIYNLEIRPDDIWVIPFSRSGTTWLQELVWLVN-NNLDY 399
+LS L+P D+ QD + +Y I+P+ + VIP T ++ + + +D+
Sbjct: 2368 KLSKLDPEDMP--PSVQDLLQQVYQKNIQPELVEVIPVEGKQTLRFPSMLAEEDVDEVDH 2425
Query: 400 AAAASQPLNKRYAYIEHVTQKSDAAKKMPQSSRP 501
+ + + + VT+ D A+ +P +P
Sbjct: 2426 SKEGIKKIETAPEEVRKVTEPEDVARVIPSPIKP 2459
>AE014297-1070|AAO41536.1| 4723|Drosophila melanogaster CG33208-PG,
isoform G protein.
Length = 4723
Score = 33.1 bits (72), Expect = 0.53
Identities = 21/94 (22%), Positives = 43/94 (45%), Gaps = 1/94 (1%)
Frame = +1
Query: 223 RLSALEPRDISLHQGYQDHAEDIYNLEIRPDDIWVIPFSRSGTTWLQELVWLVN-NNLDY 399
+LS L+P D+ QD + +Y I+P+ + VIP T ++ + + +D+
Sbjct: 2368 KLSKLDPEDMP--PSVQDLLQQVYQKNIQPELVEVIPVEGKQTLRFPSMLAEEDVDEVDH 2425
Query: 400 AAAASQPLNKRYAYIEHVTQKSDAAKKMPQSSRP 501
+ + + + VT+ D A+ +P +P
Sbjct: 2426 SKEGIKKIETAPEEVRKVTEPEDVARVIPSPIKP 2459
>AE014297-1069|AAO41535.1| 4723|Drosophila melanogaster CG33208-PF,
isoform F protein.
Length = 4723
Score = 33.1 bits (72), Expect = 0.53
Identities = 21/94 (22%), Positives = 43/94 (45%), Gaps = 1/94 (1%)
Frame = +1
Query: 223 RLSALEPRDISLHQGYQDHAEDIYNLEIRPDDIWVIPFSRSGTTWLQELVWLVN-NNLDY 399
+LS L+P D+ QD + +Y I+P+ + VIP T ++ + + +D+
Sbjct: 2368 KLSKLDPEDMP--PSVQDLLQQVYQKNIQPELVEVIPVEGKQTLRFPSMLAEEDVDEVDH 2425
Query: 400 AAAASQPLNKRYAYIEHVTQKSDAAKKMPQSSRP 501
+ + + + VT+ D A+ +P +P
Sbjct: 2426 SKEGIKKIETAPEEVRKVTEPEDVARVIPSPIKP 2459
>AE014297-1068|AAO41534.1| 4723|Drosophila melanogaster CG33208-PD,
isoform D protein.
Length = 4723
Score = 33.1 bits (72), Expect = 0.53
Identities = 21/94 (22%), Positives = 43/94 (45%), Gaps = 1/94 (1%)
Frame = +1
Query: 223 RLSALEPRDISLHQGYQDHAEDIYNLEIRPDDIWVIPFSRSGTTWLQELVWLVN-NNLDY 399
+LS L+P D+ QD + +Y I+P+ + VIP T ++ + + +D+
Sbjct: 2368 KLSKLDPEDMP--PSVQDLLQQVYQKNIQPELVEVIPVEGKQTLRFPSMLAEEDVDEVDH 2425
Query: 400 AAAASQPLNKRYAYIEHVTQKSDAAKKMPQSSRP 501
+ + + + VT+ D A+ +P +P
Sbjct: 2426 SKEGIKKIETAPEEVRKVTEPEDVARVIPSPIKP 2459
>AE014297-1067|AAO41533.1| 4723|Drosophila melanogaster CG33208-PC,
isoform C protein.
Length = 4723
Score = 33.1 bits (72), Expect = 0.53
Identities = 21/94 (22%), Positives = 43/94 (45%), Gaps = 1/94 (1%)
Frame = +1
Query: 223 RLSALEPRDISLHQGYQDHAEDIYNLEIRPDDIWVIPFSRSGTTWLQELVWLVN-NNLDY 399
+LS L+P D+ QD + +Y I+P+ + VIP T ++ + + +D+
Sbjct: 2368 KLSKLDPEDMP--PSVQDLLQQVYQKNIQPELVEVIPVEGKQTLRFPSMLAEEDVDEVDH 2425
Query: 400 AAAASQPLNKRYAYIEHVTQKSDAAKKMPQSSRP 501
+ + + + VT+ D A+ +P +P
Sbjct: 2426 SKEGIKKIETAPEEVRKVTEPEDVARVIPSPIKP 2459
>BT009937-1|AAQ22406.1| 1872|Drosophila melanogaster SD06328p
protein.
Length = 1872
Score = 31.1 bits (67), Expect = 2.1
Identities = 19/53 (35%), Positives = 26/53 (49%)
Frame = +1
Query: 418 PLNKRYAYIEHVTQKSDAAKKMPQSSRPEQRATFESFETLPNLPSPRYVKSHL 576
P R+A I+ + + + PQ S P +R+ F S LP LPS SHL
Sbjct: 460 PTRGRHASIQSTSTTTSSPAGRPQIS-PRRRSIFGSEPRLPELPSALGYTSHL 511
>AE014134-3335|AAF53958.1| 982|Drosophila melanogaster CG12050-PA
protein.
Length = 982
Score = 31.1 bits (67), Expect = 2.1
Identities = 13/34 (38%), Positives = 22/34 (64%)
Frame = +1
Query: 478 KMPQSSRPEQRATFESFETLPNLPSPRYVKSHLP 579
K+ +SS+P++ T + PN+P P Y +S+LP
Sbjct: 725 KLDESSKPKKEKTGKLHVFQPNVPLPLYQRSNLP 758
>AE013599-3254|AAF46751.2| 1831|Drosophila melanogaster CG30263-PA
protein.
Length = 1831
Score = 31.1 bits (67), Expect = 2.1
Identities = 19/53 (35%), Positives = 26/53 (49%)
Frame = +1
Query: 418 PLNKRYAYIEHVTQKSDAAKKMPQSSRPEQRATFESFETLPNLPSPRYVKSHL 576
P R+A I+ + + + PQ S P +R+ F S LP LPS SHL
Sbjct: 459 PTRGRHASIQSTSTTTSSPAGRPQIS-PRRRSIFGSEPRLPELPSALGYTSHL 510
>BT010040-1|AAQ22509.1| 759|Drosophila melanogaster LD41948p
protein.
Length = 759
Score = 30.7 bits (66), Expect = 2.8
Identities = 24/88 (27%), Positives = 39/88 (44%)
Frame = +1
Query: 391 LDYAAAASQPLNKRYAYIEHVTQKSDAAKKMPQSSRPEQRATFESFETLPNLPSPRYVKS 570
L AA PLN Y + ++ AAK+ P + P TF++ + S Y KS
Sbjct: 489 LRIVGAAGLPLNPGYGKSKKQVKRQSAAKRFPPNEPPNTYVTFQAI----SCNSQTY-KS 543
Query: 571 HLPLSCLPPALLDTAKVFYIARDPRDVA 654
H L P + + K ++++ DV+
Sbjct: 544 HEGLVYATPIVPKSTKPQWLSKFRVDVS 571
>BT003572-1|AAO39576.1| 547|Drosophila melanogaster LD43576p
protein.
Length = 547
Score = 30.7 bits (66), Expect = 2.8
Identities = 24/88 (27%), Positives = 39/88 (44%)
Frame = +1
Query: 391 LDYAAAASQPLNKRYAYIEHVTQKSDAAKKMPQSSRPEQRATFESFETLPNLPSPRYVKS 570
L AA PLN Y + ++ AAK+ P + P TF++ + S Y KS
Sbjct: 277 LRIVGAAGLPLNPGYGKSKKQVKRQSAAKRFPPNEPPNTYVTFQAI----SCNSQTY-KS 331
Query: 571 HLPLSCLPPALLDTAKVFYIARDPRDVA 654
H L P + + K ++++ DV+
Sbjct: 332 HEGLVYATPIVPKSTKPQWLSKFRVDVS 359
>AE014296-3387|AAF51614.2| 480|Drosophila melanogaster CG32425-PC,
isoform C protein.
Length = 480
Score = 30.7 bits (66), Expect = 2.8
Identities = 24/88 (27%), Positives = 39/88 (44%)
Frame = +1
Query: 391 LDYAAAASQPLNKRYAYIEHVTQKSDAAKKMPQSSRPEQRATFESFETLPNLPSPRYVKS 570
L AA PLN Y + ++ AAK+ P + P TF++ + S Y KS
Sbjct: 210 LRIVGAAGLPLNPGYGKSKKQVKRQSAAKRFPPNEPPNTYVTFQAI----SCNSQTY-KS 264
Query: 571 HLPLSCLPPALLDTAKVFYIARDPRDVA 654
H L P + + K ++++ DV+
Sbjct: 265 HEGLVYATPIVPKSTKPQWLSKFRVDVS 292
>AE014296-3385|AAN12134.1| 759|Drosophila melanogaster CG32425-PE,
isoform E protein.
Length = 759
Score = 30.7 bits (66), Expect = 2.8
Identities = 24/88 (27%), Positives = 39/88 (44%)
Frame = +1
Query: 391 LDYAAAASQPLNKRYAYIEHVTQKSDAAKKMPQSSRPEQRATFESFETLPNLPSPRYVKS 570
L AA PLN Y + ++ AAK+ P + P TF++ + S Y KS
Sbjct: 489 LRIVGAAGLPLNPGYGKSKKQVKRQSAAKRFPPNEPPNTYVTFQAI----SCNSQTY-KS 543
Query: 571 HLPLSCLPPALLDTAKVFYIARDPRDVA 654
H L P + + K ++++ DV+
Sbjct: 544 HEGLVYATPIVPKSTKPQWLSKFRVDVS 571
>AE014296-3384|AAF51618.2| 759|Drosophila melanogaster CG32425-PA,
isoform A protein.
Length = 759
Score = 30.7 bits (66), Expect = 2.8
Identities = 24/88 (27%), Positives = 39/88 (44%)
Frame = +1
Query: 391 LDYAAAASQPLNKRYAYIEHVTQKSDAAKKMPQSSRPEQRATFESFETLPNLPSPRYVKS 570
L AA PLN Y + ++ AAK+ P + P TF++ + S Y KS
Sbjct: 489 LRIVGAAGLPLNPGYGKSKKQVKRQSAAKRFPPNEPPNTYVTFQAI----SCNSQTY-KS 543
Query: 571 HLPLSCLPPALLDTAKVFYIARDPRDVA 654
H L P + + K ++++ DV+
Sbjct: 544 HEGLVYATPIVPKSTKPQWLSKFRVDVS 571
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 37,000,067
Number of Sequences: 53049
Number of extensions: 785566
Number of successful extensions: 2483
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 2104
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2475
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4341591036
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -