Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP16_F_J17
(894 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U28741-2|AAA68326.2| 377|Caenorhabditis elegans Hypothetical pr... 31 1.1
U10401-4|AAN65289.1| 937|Caenorhabditis elegans Myc and mondo-l... 30 1.9
U10401-3|AAA19059.2| 1009|Caenorhabditis elegans Myc and mondo-l... 30 1.9
AL132858-6|CAB60475.1| 412|Caenorhabditis elegans Hypothetical ... 30 1.9
AF264757-1|AAK20949.1| 1009|Caenorhabditis elegans Mlx interacto... 30 1.9
AF213473-1|AAL50027.1| 913|Caenorhabditis elegans basic helix-l... 30 1.9
U28741-3|AAA68327.2| 410|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z81484-1|CAB03967.1| 314|Caenorhabditis elegans Hypothetical pr... 29 5.9
Z81054-3|CAC70083.1| 190|Caenorhabditis elegans Hypothetical pr... 29 5.9
Z81054-2|CAB02880.3| 223|Caenorhabditis elegans Hypothetical pr... 29 5.9
U97006-1|AAC47965.1| 2076|Caenorhabditis elegans Hypothetical pr... 28 7.8
U41263-10|AAO38593.1| 610|Caenorhabditis elegans Hypothetical p... 28 7.8
>U28741-2|AAA68326.2| 377|Caenorhabditis elegans Hypothetical
protein F35D2.2 protein.
Length = 377
Score = 31.1 bits (67), Expect = 1.1
Identities = 16/58 (27%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Frame = +1
Query: 430 RYAYIEHVTQKSDAAKK--MPQSSRPEQRATFESFETLPNLPSPRYVKSHLPLSCLPP 597
++ Y+ H D K+ + S P +A + P LP ++ K+++PL+C PP
Sbjct: 144 KFGYVNHPVNMMDLEKEDFVTLMSDPAVQANRNAH---PTLPLGKFAKTYVPLNCKPP 198
>U10401-4|AAN65289.1| 937|Caenorhabditis elegans Myc and mondo-like
protein 1, isoformb protein.
Length = 937
Score = 30.3 bits (65), Expect = 1.9
Identities = 30/117 (25%), Positives = 49/117 (41%), Gaps = 3/117 (2%)
Frame = +1
Query: 226 LSALEPRDISLHQGYQ---DHAEDIYNLEIRPDDIWVIPFSRSGTTWLQELVWLVNNNLD 396
L A + R +L G+ D D+Y+ ++P + V+ S LQ W +D
Sbjct: 809 LHAEQNRRSALKDGFDQLMDIIPDLYSGGVKPTNAVVLAKSADHIRRLQAEKWDKTQKID 868
Query: 397 YAAAASQPLNKRYAYIEHVTQKSDAAKKMPQSSRPEQRATFESFETLPNLPSPRYVK 567
A A + LN++ ++ +PQSS P + +S +L RYVK
Sbjct: 869 EAKAKIEKLNQKITSLQ---------SNLPQSSAPSSSSQVDSKTSLETF-FDRYVK 915
>U10401-3|AAA19059.2| 1009|Caenorhabditis elegans Myc and mondo-like
protein 1, isoforma protein.
Length = 1009
Score = 30.3 bits (65), Expect = 1.9
Identities = 30/117 (25%), Positives = 49/117 (41%), Gaps = 3/117 (2%)
Frame = +1
Query: 226 LSALEPRDISLHQGYQ---DHAEDIYNLEIRPDDIWVIPFSRSGTTWLQELVWLVNNNLD 396
L A + R +L G+ D D+Y+ ++P + V+ S LQ W +D
Sbjct: 809 LHAEQNRRSALKDGFDQLMDIIPDLYSGGVKPTNAVVLAKSADHIRRLQAEKWDKTQKID 868
Query: 397 YAAAASQPLNKRYAYIEHVTQKSDAAKKMPQSSRPEQRATFESFETLPNLPSPRYVK 567
A A + LN++ ++ +PQSS P + +S +L RYVK
Sbjct: 869 EAKAKIEKLNQKITSLQ---------SNLPQSSAPSSSSQVDSKTSLETF-FDRYVK 915
>AL132858-6|CAB60475.1| 412|Caenorhabditis elegans Hypothetical
protein Y113G7A.11 protein.
Length = 412
Score = 30.3 bits (65), Expect = 1.9
Identities = 32/138 (23%), Positives = 52/138 (37%), Gaps = 5/138 (3%)
Frame = +1
Query: 295 NLEIRPDDIWVIPFSRSGTTWLQELVWLVNNNLDYAAAASQPLNKRYAYIEHVTQKSDAA 474
+++ D+ + + + GTTWLQ + + DY A L + IE + A
Sbjct: 81 SMQFGETDVVIATYPKCGTTWLQHITSQLIKGHDYKAGKGNELCVQSPMIERM-----GA 135
Query: 475 KKMPQSSRPEQRATFESFETLPNLPSPRYVKS-HLPLSCLPPALLDTA--KVFYIARDPR 645
P T +P P +Y+ P CL K++ A
Sbjct: 136 AFADNIKGPRVLKTHFHHYNIPKYPDTKYIYCVRNPKDCLTSYFHHNRNFKIYNWANGTW 195
Query: 646 DVAVSLYFADKL-FG-YF 693
DV + L+ + +L FG YF
Sbjct: 196 DVFLDLFASGQLAFGDYF 213
>AF264757-1|AAK20949.1| 1009|Caenorhabditis elegans Mlx interactor
protein.
Length = 1009
Score = 30.3 bits (65), Expect = 1.9
Identities = 30/117 (25%), Positives = 49/117 (41%), Gaps = 3/117 (2%)
Frame = +1
Query: 226 LSALEPRDISLHQGYQ---DHAEDIYNLEIRPDDIWVIPFSRSGTTWLQELVWLVNNNLD 396
L A + R +L G+ D D+Y+ ++P + V+ S LQ W +D
Sbjct: 809 LHAEQNRRSALKDGFDQLMDIIPDLYSGGVKPTNAVVLAKSADHIRRLQAEKWDKTQKID 868
Query: 397 YAAAASQPLNKRYAYIEHVTQKSDAAKKMPQSSRPEQRATFESFETLPNLPSPRYVK 567
A A + LN++ ++ +PQSS P + +S +L RYVK
Sbjct: 869 EAKAKIEKLNQKITSLQ---------SNLPQSSAPSSSSQVDSKTSLETF-FDRYVK 915
>AF213473-1|AAL50027.1| 913|Caenorhabditis elegans basic
helix-loop-helix leucinezipper WBSCR14-like protein
protein.
Length = 913
Score = 30.3 bits (65), Expect = 1.9
Identities = 30/117 (25%), Positives = 49/117 (41%), Gaps = 3/117 (2%)
Frame = +1
Query: 226 LSALEPRDISLHQGYQ---DHAEDIYNLEIRPDDIWVIPFSRSGTTWLQELVWLVNNNLD 396
L A + R +L G+ D D+Y+ ++P + V+ S LQ W +D
Sbjct: 713 LHAEQNRRSALKDGFDQLMDIIPDLYSGGVKPTNAVVLAKSADHIRRLQAEKWDKTQKID 772
Query: 397 YAAAASQPLNKRYAYIEHVTQKSDAAKKMPQSSRPEQRATFESFETLPNLPSPRYVK 567
A A + LN++ ++ +PQSS P + +S +L RYVK
Sbjct: 773 EAKAKIEKLNQKITSLQ---------SNLPQSSAPSSSSQVDSKTSLETF-FDRYVK 819
>U28741-3|AAA68327.2| 410|Caenorhabditis elegans Hypothetical
protein F35D2.1 protein.
Length = 410
Score = 29.5 bits (63), Expect = 3.4
Identities = 17/64 (26%), Positives = 29/64 (45%), Gaps = 2/64 (3%)
Frame = +1
Query: 412 SQPLNKRYAYIEHVTQKSDAAKK--MPQSSRPEQRATFESFETLPNLPSPRYVKSHLPLS 585
+Q ++ Y+ H D K+ + S P +A + P LP ++ K +P+S
Sbjct: 135 TQDTTTKFGYLNHPVNMLDLEKEDFVKLMSDPAVQANRRAH---PTLPMGQFGKQFMPMS 191
Query: 586 CLPP 597
C PP
Sbjct: 192 CKPP 195
>Z81484-1|CAB03967.1| 314|Caenorhabditis elegans Hypothetical
protein C47A10.2 protein.
Length = 314
Score = 28.7 bits (61), Expect = 5.9
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = -2
Query: 185 ILFLRHRFNFMWKTERHIFFLLNYLYLIRH 96
++F +H + W+ R+ FFLLNY+Y + +
Sbjct: 119 LIFAKHTW---WRFGRYPFFLLNYIYALTY 145
>Z81054-3|CAC70083.1| 190|Caenorhabditis elegans Hypothetical
protein F01D4.5b protein.
Length = 190
Score = 28.7 bits (61), Expect = 5.9
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +2
Query: 494 ADLNRELRLRASKLCQIYRHRDMLKVTYRCRVCHQ 598
A +NR L +KL Q D ++ +Y C +CH+
Sbjct: 41 ATVNRTLDFHMTKLFQWEEQSDAIESSYVCALCHE 75
>Z81054-2|CAB02880.3| 223|Caenorhabditis elegans Hypothetical
protein F01D4.5a protein.
Length = 223
Score = 28.7 bits (61), Expect = 5.9
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +2
Query: 494 ADLNRELRLRASKLCQIYRHRDMLKVTYRCRVCHQ 598
A +NR L +KL Q D ++ +Y C +CH+
Sbjct: 82 ATVNRTLDFHMTKLFQWEEQSDAIESSYVCALCHE 116
>U97006-1|AAC47965.1| 2076|Caenorhabditis elegans Hypothetical
protein C13F10.4 protein.
Length = 2076
Score = 28.3 bits (60), Expect = 7.8
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +1
Query: 577 PLSCLPPALLDTAKVFYIARDPRDVAVSLYFADKL 681
PL+CL ALL KVF + + V ++ +F D +
Sbjct: 795 PLTCLNTALLTYGKVFPLVNNKHKVQITEHFWDTI 829
>U41263-10|AAO38593.1| 610|Caenorhabditis elegans Hypothetical
protein T19D12.2a protein.
Length = 610
Score = 28.3 bits (60), Expect = 7.8
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +1
Query: 280 AEDIYNLEIRPDDIWVIPFSRSGTTWLQELVWLVNN 387
A+ + +L+ D +++ FS T LVWL+NN
Sbjct: 491 AKSLIDLQSNVDTLYINAFSMRDATISDGLVWLINN 526
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,980,577
Number of Sequences: 27780
Number of extensions: 413982
Number of successful extensions: 1240
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1118
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1240
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2265843888
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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