Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP16_F_J16
         (857 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_06_0561 + 34728428-34728439,34728529-34728615,34728729-347287...    85   5e-17

>03_06_0561 +
           34728428-34728439,34728529-34728615,34728729-34728750,
           34728843-34728925,34729139-34729171,34729468-34729546,
           34729642-34729694,34729931-34729991,34730168-34730250,
           34730418-34730513
          Length = 202

 Score = 85.4 bits (202), Expect = 5e-17
 Identities = 40/86 (46%), Positives = 51/86 (59%)
 Frame = +1

Query: 223 RRKWDKEEFXXXXXXXXXXXXXXXXXXXXXXTPVKRELLKQREYKVDLDSRLGKSVVINK 402
           RRK+DKEE+                       PV+R+ LK R+Y+VDL+SRLGK+ V+  
Sbjct: 13  RRKFDKEEYLERARQREREEKEEARKGKEKGPPVQRQPLKHRDYEVDLESRLGKTQVVTP 72

Query: 403 NTPTSQSGGYYCNVCDCVVKDSINFL 480
             P SQ  GYYC VC+CVVKDS N+L
Sbjct: 73  IAPLSQQAGYYCKVCECVVKDSANYL 98



 Score = 56.4 bits (130), Expect = 3e-08
 Identities = 24/31 (77%), Positives = 29/31 (93%)
 Frame = +2

Query: 479 LDHINGKKHQRNLGMSMKIERSSLDQVKARF 571
           LDHINGKKHQR LGMSM++ER+SL+QV+ RF
Sbjct: 98  LDHINGKKHQRALGMSMRVERASLEQVQKRF 128


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,741,579
Number of Sequences: 37544
Number of extensions: 268299
Number of successful extensions: 512
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 502
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 512
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2397465936
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)