Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP16_F_J14
(880 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC12G12.09 |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 38 0.002
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 37 0.004
SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||M... 37 0.004
SPBC1711.05 |||nucleocytoplasmic transport chaperone Srp40 |Schi... 36 0.008
SPAC29B12.01 |ino80|SPAC3G6.12|SNF2 family helicase Ino80|Schizo... 34 0.031
SPAC3A11.05c |kms1||meiotic spindle pole body protein Kms1|Schiz... 31 0.16
SPBC12C2.08 |dnm1||dynamin Dnm1|Schizosaccharomyces pombe|chr 2|... 31 0.22
SPBC1289.10c |||transcription factor |Schizosaccharomyces pombe|... 30 0.50
SPCP1E11.11 |||Puf family RNA-binding protein|Schizosaccharomyce... 30 0.50
SPAC29B12.07 |sec16||multidomain vesicle coat component Sec16|Sc... 29 0.87
SPBC1105.14 |rsv2||transcription factor Rsv2|Schizosaccharomyces... 29 0.87
SPBC354.13 |rga6||GTPase activating protein Rga6|Schizosaccharom... 28 1.5
SPAC3G6.11 |||ATP-dependent DNA helicase Chl1|Schizosaccharomyce... 28 2.0
SPBP19A11.04c |mor2|cps12|morphogenesis protein Mor2|Schizosacch... 28 2.0
SPCC4G3.10c |rhp42|rhp4b|DNA repair protein Rhp42|Schizosaccharo... 27 2.7
SPAC17H9.06c |||conserved fungal protein|Schizosaccharomyces pom... 27 2.7
SPAC1486.09 |||ribosome biogenesis protein Nob1 |Schizosaccharom... 27 3.5
SPAC15A10.16 |bud6|aip3, fat1, SPAC15E1.01|actin interacting pro... 27 3.5
SPCC1682.02c |mcm3||MCM complex subunit Mcm3|Schizosaccharomyces... 27 4.7
SPBC342.05 |crb2|rhp9, rhp9|DNA repair protein RAD9 homolog, Rhp... 27 4.7
SPBC30B4.02c |||R3H and G-patch domain, unknown biological role|... 27 4.7
SPAC13G6.10c |||O-glucosyl hydrolase |Schizosaccharomyces pombe|... 26 6.1
SPAC20G8.05c |cdc15||cell division control protein Cdc15|Schizos... 26 8.1
SPBC36.12c |git7||SGT1-like protein Git7|Schizosaccharomyces pom... 26 8.1
SPAC23C4.19 |spt5||transcription elongation factor Spt5|Schizosa... 26 8.1
>SPAC12G12.09 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 977
Score = 37.9 bits (84), Expect = 0.002
Identities = 23/96 (23%), Positives = 42/96 (43%), Gaps = 1/96 (1%)
Frame = +2
Query: 293 EPSSSQDENTKTKESVSPPIIIE-ELSDNMSRQHSGSMEDESEKSDDNQSQKSLDVLLDT 469
E +S +N K++++ PP + E +LS N S QH + + ++ + S
Sbjct: 99 EATSPLQQNGKSRDTEKPPSMKEKDLSSNSSSQHDKAFHERVDQGKNKSSTTKYQEFRTV 158
Query: 470 SMNKPFSPTSSVTSQRKLEWDSLADVGYANESDRKT 577
+ + FSP SV S + D + + S+ T
Sbjct: 159 ADYREFSPGQSVNSLKPNSGDEVPSTKSSTSSEMHT 194
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 36.7 bits (81), Expect = 0.004
Identities = 34/139 (24%), Positives = 58/139 (41%), Gaps = 2/139 (1%)
Frame = +2
Query: 272 SIQCSIPEPSSSQDENTKTKESVSPPIIIEELSDNMSRQHSGSMEDESEKSDDNQSQKSL 451
S+ S PSSS +T T S+S I S + S S S S + + S S+
Sbjct: 214 SVVSSSSSPSSSSS-STLTSSSLSTSSIPSTSSSSSSTSSSLSSSSSSSTASSSSSSSSI 272
Query: 452 DVLLDTSMNKPFSPTSSVTSQRKLEWDSLADVGYANESDRKTSASSLSTL--ERLALKQQ 625
+S + P S +S+++S S S +S+S STL ++
Sbjct: 273 ISSSSSSSSSPTSTSSTISSSSSSS-SSPTSTSSTISSSSSSSSSFSSTLSSSSMSSSSS 331
Query: 626 YSNNDTKNEMGAPTAQSTP 682
+S++ T + ++ S+P
Sbjct: 332 FSSSPTSSSSTISSSSSSP 350
>SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 500
Score = 36.7 bits (81), Expect = 0.004
Identities = 31/109 (28%), Positives = 55/109 (50%), Gaps = 2/109 (1%)
Frame = +2
Query: 293 EPSSSQDENTKTKESVSPPIIIEELSDNMSRQHSGSMEDESE-KSDDNQSQKSLDVLLDT 469
E SS +++++E + IEE ++ S S S ESE +S ++S++ +V+ T
Sbjct: 135 ESSSESSSSSESEEEEEAVVKIEEKKESSSDSSSESSSSESESESSSSESEEEEEVVEKT 194
Query: 470 SMNKPFSPTSSVTSQRKLEWDSLADVGYANES-DRKTSASSLSTLERLA 613
K S SS S+ DS ++ G ++ S D ++ +SS +R A
Sbjct: 195 EEKKEGSSESSSDSESSS--DSSSESGDSDSSSDSESESSSEDEKKRKA 241
>SPBC1711.05 |||nucleocytoplasmic transport chaperone Srp40
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 451
Score = 35.9 bits (79), Expect = 0.008
Identities = 33/133 (24%), Positives = 58/133 (43%)
Frame = +2
Query: 305 SQDENTKTKESVSPPIIIEELSDNMSRQHSGSMEDESEKSDDNQSQKSLDVLLDTSMNKP 484
S D++ K + +PP E+ + SGS DES+ S S D +S +
Sbjct: 79 SNDDSQKISKKGAPP---EKAHSSSEASGSGSSSDESDSSSSESESSSEDNDSSSSSSDS 135
Query: 485 FSPTSSVTSQRKLEWDSLADVGYANESDRKTSASSLSTLERLALKQQYSNNDTKNEMGAP 664
S +SS S S +D + S+ S+SS S+ E + +ND+ +
Sbjct: 136 ESESSSEDSDSS---SSSSDSESESSSEGSDSSSSSSSSES---ESSSEDNDSSSSSSDS 189
Query: 665 TAQSTPIDENSNA 703
++S+ D +S++
Sbjct: 190 ESESSSEDSDSSS 202
Score = 29.5 bits (63), Expect = 0.66
Identities = 26/103 (25%), Positives = 47/103 (45%), Gaps = 7/103 (6%)
Frame = +2
Query: 299 SSSQDENTKTKESVSPPIIIEELSDNMSRQHSGSMEDESEKSDDNQSQKSLDVLLDTSMN 478
SSS+D N+ T + S + + +++ S + S S++DE ++S K ++S +
Sbjct: 312 SSSEDGNSNTDTTTSGEVSAQSSTNSTSSEESTSVKDEDSSKIHDKSLKRKHEDDESSTS 371
Query: 479 KPFSPTSSVTSQR---KLEWD----SLADVGYANESDRKTSAS 586
S T+ R +WD +L D + E D T A+
Sbjct: 372 TKSSRTTKTPFTRVGDPSQWDFASPALRDNSFNFEDDYGTLAN 414
Score = 28.7 bits (61), Expect = 1.2
Identities = 26/129 (20%), Positives = 55/129 (42%), Gaps = 1/129 (0%)
Frame = +2
Query: 299 SSSQDENTKTKESVSPPIIIEELSDNMSRQHSGSMEDESE-KSDDNQSQKSLDVLLDTSM 475
SSS +++++ S SD+ S S + ESE S+D+ S S +S
Sbjct: 254 SSSSSSDSESESSSKDSDSSSNSSDSEDDSSSDSSDSESESSSEDSDSTSSSSDSDSSSS 313
Query: 476 NKPFSPTSSVTSQRKLEWDSLADVGYANESDRKTSASSLSTLERLALKQQYSNNDTKNEM 655
++ + + T+ ++ S + + ES S S + +LK+++ ++++
Sbjct: 314 SEDGNSNTDTTTSGEVSAQSSTNSTSSEESTSVKDEDS-SKIHDKSLKRKHEDDESSTST 372
Query: 656 GAPTAQSTP 682
+ TP
Sbjct: 373 KSSRTTKTP 381
Score = 25.8 bits (54), Expect = 8.1
Identities = 25/113 (22%), Positives = 40/113 (35%)
Frame = +2
Query: 293 EPSSSQDENTKTKESVSPPIIIEELSDNMSRQHSGSMEDESEKSDDNQSQKSLDVLLDTS 472
+ SS+ ++ S S E S++ S S D S S+D S + S
Sbjct: 271 DSSSNSSDSEDDSSSDSSDSESESSSEDSDSTSSSSDSDSSSSSEDGNSNTDTTTSGEVS 330
Query: 473 MNKPFSPTSSVTSQRKLEWDSLADVGYANESDRKTSASSLSTLERLALKQQYS 631
+ TSS S + DS + + + SS ST K ++
Sbjct: 331 AQSSTNSTSSEESTSVKDEDSSKIHDKSLKRKHEDDESSTSTKSSRTTKTPFT 383
>SPAC29B12.01 |ino80|SPAC3G6.12|SNF2 family helicase
Ino80|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1604
Score = 33.9 bits (74), Expect = 0.031
Identities = 25/135 (18%), Positives = 59/135 (43%), Gaps = 2/135 (1%)
Frame = +2
Query: 302 SSQDENTKTKESVSPPIIIEEL--SDNMSRQHSGSMEDESEKSDDNQSQKSLDVLLDTSM 475
++++ NT +K V + SD + S +SEK+D+N + +
Sbjct: 462 ATENNNTPSKAKVKAESKVRSKAKSDKSRAKLSSDTNKDSEKNDNNDASLQSAGVASDGE 521
Query: 476 NKPFSPTSSVTSQRKLEWDSLADVGYANESDRKTSASSLSTLERLALKQQYSNNDTKNEM 655
+ P +P + + +K + LA+ + ++ +T ++ + ++ + QQ +N+ T
Sbjct: 522 SSPETPLTKASKSKKAKASKLAN-DTSKNANGETKSTPKKSKKKTSKAQQEANSTTAEGK 580
Query: 656 GAPTAQSTPIDENSN 700
+ ST ++N
Sbjct: 581 EKLSGDSTETGNSTN 595
>SPAC3A11.05c |kms1||meiotic spindle pole body protein
Kms1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 607
Score = 31.5 bits (68), Expect = 0.16
Identities = 24/104 (23%), Positives = 48/104 (46%), Gaps = 2/104 (1%)
Frame = +2
Query: 398 SMEDESEKSDDNQSQKSLDVLLDTSMNKPFSPTSSVTSQRKLEWDSLADVGYANESDRKT 577
+ D +K +N+ + SM + S S + +S +N S
Sbjct: 70 NFRDVYKKLTENEDDSFANQAEKPSMEQQNSKNSIKEDANEHSVNSAHSKSSSNASPESL 129
Query: 578 SASSLSTLERLALK--QQYSNNDTKNEMGAPTAQSTPIDENSNA 703
+ S + + +RL+L Q++++D N + P AQSTP++ N+++
Sbjct: 130 NPSQMMS-KRLSLPPMSQFTDSDFVNILRTPFAQSTPLNRNTSS 172
>SPBC12C2.08 |dnm1||dynamin Dnm1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 781
Score = 31.1 bits (67), Expect = 0.22
Identities = 27/82 (32%), Positives = 37/82 (45%)
Frame = +2
Query: 419 KSDDNQSQKSLDVLLDTSMNKPFSPTSSVTSQRKLEWDSLADVGYANESDRKTSASSLST 598
KSDD+ + LDVL N F S+ T++RK L+ V AN + RK A S+
Sbjct: 595 KSDDSAKMQPLDVLASKRYNNAF---STETAERK---TFLSYVFGANNATRK--AMSIDK 646
Query: 599 LERLALKQQYSNNDTKNEMGAP 664
L S DT ++ P
Sbjct: 647 SSSYPLNDSLSGGDTNHKNNHP 668
>SPBC1289.10c |||transcription factor |Schizosaccharomyces pombe|chr
2|||Manual
Length = 743
Score = 29.9 bits (64), Expect = 0.50
Identities = 21/55 (38%), Positives = 28/55 (50%)
Frame = +2
Query: 404 EDESEKSDDNQSQKSLDVLLDTSMNKPFSPTSSVTSQRKLEWDSLADVGYANESD 568
+ +SE + NQS KS DTS P +PT S T K + L DVG + + D
Sbjct: 655 KSDSELDNQNQSGKSNP---DTSAT-PSAPTESTTVATKSSDNQLLDVGNSTDID 705
>SPCP1E11.11 |||Puf family RNA-binding protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 642
Score = 29.9 bits (64), Expect = 0.50
Identities = 24/80 (30%), Positives = 34/80 (42%), Gaps = 1/80 (1%)
Frame = +2
Query: 404 EDESEKSDDNQSQKSLDVLL-DTSMNKPFSPTSSVTSQRKLEWDSLADVGYANESDRKTS 580
E S+KS+ +S L + KPF+ TS + K WD L +RKT
Sbjct: 98 ESSSQKSNSKESHAQRKKLQKERKAMKPFADTSL---KAKSLWDKLRQKTSIKAEERKTI 154
Query: 581 ASSLSTLERLALKQQYSNND 640
+ L L R +KQ +D
Sbjct: 155 IAELFDLIRTNVKQLVFKHD 174
>SPAC29B12.07 |sec16||multidomain vesicle coat component
Sec16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1995
Score = 29.1 bits (62), Expect = 0.87
Identities = 25/95 (26%), Positives = 37/95 (38%)
Frame = +2
Query: 254 QEVCRISIQCSIPEPSSSQDENTKTKESVSPPIIIEELSDNMSRQHSGSMEDESEKSDDN 433
Q V I IQ EP E + ES S + E N S E+ES S+DN
Sbjct: 69 QSVSEIDIQLPSSEPKEGVKEESNLIESNSLDNVQEINPQNTIGDKSAHTEEES--SNDN 126
Query: 434 QSQKSLDVLLDTSMNKPFSPTSSVTSQRKLEWDSL 538
+ + ++ M++P S+ L + L
Sbjct: 127 LVKITAGTIISDIMDEPVVDEDDKLSEEDLSKEDL 161
>SPBC1105.14 |rsv2||transcription factor Rsv2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 637
Score = 29.1 bits (62), Expect = 0.87
Identities = 22/75 (29%), Positives = 35/75 (46%)
Frame = +2
Query: 278 QCSIPEPSSSQDENTKTKESVSPPIIIEELSDNMSRQHSGSMEDESEKSDDNQSQKSLDV 457
Q S+PE + + T +E+ S +LSD S + ++ D SLD
Sbjct: 60 QISMPELNLKRFNPTTLEENNS------DLSDMSSWDYMMNVPIRVYNDADTMDPFSLDT 113
Query: 458 LLDTSMNKPFSPTSS 502
+ D+SM+ PF P +S
Sbjct: 114 IPDSSMDMPFDPLAS 128
>SPBC354.13 |rga6||GTPase activating protein
Rga6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 733
Score = 28.3 bits (60), Expect = 1.5
Identities = 18/67 (26%), Positives = 37/67 (55%), Gaps = 4/67 (5%)
Frame = +2
Query: 287 IPEPSSSQDENTKTKESVSPPIIIEELSDNMS--RQHSGSMEDESEK--SDDNQSQKSLD 454
IPE ++ +E+ + +S +I + SDN S +++ ++ +ES K D+ Q Q +
Sbjct: 583 IPENVNASEESYPNVKHISKLPLINDSSDNESGNQENDDAVANESTKVVVDNQQPQPKIS 642
Query: 455 VLLDTSM 475
+ DT++
Sbjct: 643 TVSDTAV 649
>SPAC3G6.11 |||ATP-dependent DNA helicase Chl1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 844
Score = 27.9 bits (59), Expect = 2.0
Identities = 24/105 (22%), Positives = 46/105 (43%), Gaps = 3/105 (2%)
Frame = +2
Query: 386 QHSGSMEDESEKSDDNQSQKSLDVLLDTSMNKPFSPTSSVTSQRKLEWDS-LADVGYANE 562
+H G + +++EKS+DN+S S + D + + + + + L ++ N+
Sbjct: 64 EHGGVLLEDNEKSNDNKSNTS-SKIPDWVLEQDLKIQKDLVKETHARLEQRLEEIRKRNQ 122
Query: 563 SDRKTSASSLSTLERLALKQQYSNND--TKNEMGAPTAQSTPIDE 691
S RK S+ ST K++ N + T + P+DE
Sbjct: 123 S-RKNQMSNNSTTYHRETKRRNINAEASTSDNCNNSNTSVDPMDE 166
>SPBP19A11.04c |mor2|cps12|morphogenesis protein
Mor2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2196
Score = 27.9 bits (59), Expect = 2.0
Identities = 15/65 (23%), Positives = 32/65 (49%)
Frame = +2
Query: 416 EKSDDNQSQKSLDVLLDTSMNKPFSPTSSVTSQRKLEWDSLADVGYANESDRKTSASSLS 595
+K +DN+ + + L+ + +KP + S+ RK+ D + G + + S+ S+
Sbjct: 77 KKGEDNEFDRCIQALVALASSKPVAVIESLLCWRKVRVDITSSSGTPRVVNERRSSISIY 136
Query: 596 TLERL 610
L R+
Sbjct: 137 ILCRV 141
>SPCC4G3.10c |rhp42|rhp4b|DNA repair protein
Rhp42|Schizosaccharomyces pombe|chr 3|||Manual
Length = 686
Score = 27.5 bits (58), Expect = 2.7
Identities = 17/62 (27%), Positives = 27/62 (43%)
Frame = +2
Query: 272 SIQCSIPEPSSSQDENTKTKESVSPPIIIEELSDNMSRQHSGSMEDESEKSDDNQSQKSL 451
S+ S PS S D+N S+ E + + GS ED+ E DD + + +
Sbjct: 51 SLSSSAEPPSESLDDNISALNSLQRSASSSEKGSDEDNEKLGSSEDD-EFDDDFDTWEQV 109
Query: 452 DV 457
D+
Sbjct: 110 DL 111
>SPAC17H9.06c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 601
Score = 27.5 bits (58), Expect = 2.7
Identities = 24/99 (24%), Positives = 48/99 (48%), Gaps = 9/99 (9%)
Frame = +2
Query: 299 SSSQDENTKTKESVSPPII--IEELSD-NMSRQHSGSMEDESEKSDD------NQSQKSL 451
SSS+D+ + + E + PII EE+ + N Q ++ E ++ N S+K+
Sbjct: 267 SSSEDDESSSPEDLLKPIIRSTEEMENLNELEQEVQDLDPIDEGFEEKVPRFRNPSKKAF 326
Query: 452 DVLLDTSMNKPFSPTSSVTSQRKLEWDSLADVGYANESD 568
L + N+ +S S+TS++ + +++ +E D
Sbjct: 327 YEKLHSLRNRSYSKLESLTSEKSDTLITKSELANESEED 365
>SPAC1486.09 |||ribosome biogenesis protein Nob1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 388
Score = 27.1 bits (57), Expect = 3.5
Identities = 15/59 (25%), Positives = 29/59 (49%), Gaps = 5/59 (8%)
Frame = +2
Query: 293 EPSSSQDENTKTKESVSPPIIIEELSDNMSRQHSGSME-----DESEKSDDNQSQKSLD 454
+P+SS + K E+ P E+ + + QHS + E +E+++ +DN+ D
Sbjct: 131 KPTSSDTASVKETENSDPKSAENEVLEGETTQHSNNKEAHPNTEENKEQEDNEEDDEDD 189
>SPAC15A10.16 |bud6|aip3, fat1, SPAC15E1.01|actin interacting
protein 3 homolog Bud6|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1385
Score = 27.1 bits (57), Expect = 3.5
Identities = 31/127 (24%), Positives = 55/127 (43%), Gaps = 12/127 (9%)
Frame = +2
Query: 302 SSQDENTKTKESVSPPIIIEELSDNMSRQHSGSME------DESEKSDDNQSQKSLDVLL 463
+S + +T+E + P + E+++D + + E ++E S+D +SL L
Sbjct: 467 NSPNSIRETEEYAASPKL-EDIADEVETDATSQRELLERQIQKAESSEDTSEIESLQGKL 525
Query: 464 D----TSMNKPFSPTSSVTSQRKLEWDSLADVGYANES--DRKTSASSLSTLERLALKQQ 625
+S + P+SSV E A ES +RK A +S+ E++
Sbjct: 526 SLPQVSSTQQEIQPSSSVPEAASNEIAEKEPAVTAIESITERKEEAPVISSSEKIESGTS 585
Query: 626 YSNNDTK 646
S +DTK
Sbjct: 586 ISTSDTK 592
>SPCC1682.02c |mcm3||MCM complex subunit Mcm3|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 879
Score = 26.6 bits (56), Expect = 4.7
Identities = 15/60 (25%), Positives = 27/60 (45%)
Frame = +2
Query: 326 TKESVSPPIIIEELSDNMSRQHSGSMEDESEKSDDNQSQKSLDVLLDTSMNKPFSPTSSV 505
T++ P+ IE S S+++ E++ Q +S+D+LLD + P V
Sbjct: 181 TQDENGNPLSIEFGFSTFRDHQSISLQEMPERAPPGQLPRSIDILLDDDLVDTVKPGDRV 240
>SPBC342.05 |crb2|rhp9, rhp9|DNA repair protein RAD9 homolog,
Rhp9|Schizosaccharomyces pombe|chr 2|||Manual
Length = 778
Score = 26.6 bits (56), Expect = 4.7
Identities = 15/56 (26%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Frame = +2
Query: 341 SPPIIIEELSDNMSRQHSGSMEDESEKSDDNQSQ--KSLDVLLDTSMNKPFSPTSS 502
+PP + E S+ ++ E SEK D+ +++ K + D + PF+ SS
Sbjct: 235 TPPAFLPETSEKQYKRKFSFTEPSSEKVDNTETKFSKKTKNINDENFPNPFNVISS 290
>SPBC30B4.02c |||R3H and G-patch domain, unknown biological
role|Schizosaccharomyces pombe|chr 2|||Manual
Length = 695
Score = 26.6 bits (56), Expect = 4.7
Identities = 29/130 (22%), Positives = 53/130 (40%), Gaps = 10/130 (7%)
Frame = +2
Query: 296 PSSSQDENTKTKESVSPPIIIEELSDNMSRQHSGSMEDESEK---SDDNQSQKSLDVLL- 463
P S +EN + S++ +E+S + E ESEK S DN SLD+L
Sbjct: 149 PEKSMNENVLIQHSLNLAPSDKEISSTEESEQLCYKEQESEKELYSKDNDD--SLDILNV 206
Query: 464 ------DTSMNKPFSPTSSVTSQRKLEWDSLADVGYANESDRKTSASSLSTLERLALKQQ 625
D + N P +Q +L ++ + + +D+ T+ + + L++
Sbjct: 207 PNLVNDDIANNNAAPPPPLAQAQEQLSTENEDEFDIDDTTDKMTTFTMNKFADLSVLEED 266
Query: 626 YSNNDTKNEM 655
+ D E+
Sbjct: 267 DDDEDEDEEL 276
>SPAC13G6.10c |||O-glucosyl hydrolase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 530
Score = 26.2 bits (55), Expect = 6.1
Identities = 14/32 (43%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Frame = +2
Query: 467 TSMNKPFSPTSS-VTSQRKLEWDSLADVGYAN 559
TS + SPTSS V+ +R L W D+GY++
Sbjct: 280 TSSSASASPTSSSVSGKRGLAWIPGTDLGYSD 311
>SPAC20G8.05c |cdc15||cell division control protein
Cdc15|Schizosaccharomyces pombe|chr 1|||Manual
Length = 927
Score = 25.8 bits (54), Expect = 8.1
Identities = 14/45 (31%), Positives = 27/45 (60%)
Frame = +2
Query: 290 PEPSSSQDENTKTKESVSPPIIIEELSDNMSRQHSGSMEDESEKS 424
P S+S++E+ + ++ + ELS +M R+ S S++DE+ S
Sbjct: 573 PVESTSKEEDKDVPDPIANAMA--ELSSSMRRRQSTSVDDEAPVS 615
>SPBC36.12c |git7||SGT1-like protein Git7|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 379
Score = 25.8 bits (54), Expect = 8.1
Identities = 17/56 (30%), Positives = 28/56 (50%)
Frame = +2
Query: 488 SPTSSVTSQRKLEWDSLADVGYANESDRKTSASSLSTLERLALKQQYSNNDTKNEM 655
S S T + +WDSLA + E D T ++L+ L + K +++DT+ M
Sbjct: 290 SSASGNTKNKAKDWDSLAKLADL-EEDEPTGEAALANLFQNLYKN--ADDDTRRAM 342
>SPAC23C4.19 |spt5||transcription elongation factor
Spt5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 990
Score = 25.8 bits (54), Expect = 8.1
Identities = 15/53 (28%), Positives = 28/53 (52%)
Frame = -2
Query: 603 SNVLRLDADVFRSLSLAYPTSARESHSSLRCDVTLLVGENGLFIDVSNNTSND 445
S++L D++ + + +S +SH+ D T+ GE+G +V N +ND
Sbjct: 40 SDLLNDDSEAAKITTNEKQSSPVDSHNESPNDTTINKGEDGNENEVDNVNNND 92
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,353,333
Number of Sequences: 5004
Number of extensions: 67205
Number of successful extensions: 295
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 280
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 294
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 440481800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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