Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP16_F_J14
(880 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z22179-5|CAA80162.2| 786|Caenorhabditis elegans Hypothetical pr... 35 0.067
AF016684-13|AAB66203.1| 470|Caenorhabditis elegans Hypothetical... 32 0.47
Z46241-8|CAA86316.2| 1784|Caenorhabditis elegans Hypothetical pr... 32 0.62
Z32681-1|CAA83608.1| 761|Caenorhabditis elegans Hypothetical pr... 31 0.82
U41510-8|AAK39385.1| 493|Caenorhabditis elegans Hypothetical pr... 31 0.82
Z92828-1|CAB07337.1| 512|Caenorhabditis elegans Hypothetical pr... 31 1.1
U00044-7|AAA50675.1| 990|Caenorhabditis elegans Hypothetical pr... 31 1.4
AL132902-10|CAB82002.1| 286|Caenorhabditis elegans Hypothetical... 31 1.4
Z80220-2|CAD27608.1| 3185|Caenorhabditis elegans Hypothetical pr... 30 1.9
Z80220-1|CAB02304.1| 3212|Caenorhabditis elegans Hypothetical pr... 30 1.9
U21321-10|AAG00048.2| 325|Caenorhabditis elegans T box family p... 30 1.9
DQ340626-1|ABC65814.1| 782|Caenorhabditis elegans chondroitin p... 30 1.9
AF022968-9|AAB69883.3| 782|Caenorhabditis elegans Chondroitin p... 30 1.9
U50071-2|AAA93447.2| 6994|Caenorhabditis elegans Uncoordinated p... 30 2.5
U39847-1|AAB41827.1| 6994|Caenorhabditis elegans AO13 ankyrin pr... 30 2.5
U23529-8|AAL32209.1| 682|Caenorhabditis elegans G-protein-linke... 30 2.5
U23529-7|AAL32211.1| 622|Caenorhabditis elegans G-protein-linke... 30 2.5
AF117301-1|AAF26202.1| 622|Caenorhabditis elegans G protein-lin... 30 2.5
AF075245-1|AAD13747.1| 682|Caenorhabditis elegans G protein-lin... 30 2.5
AF106579-8|AAC78201.1| 710|Caenorhabditis elegans Hypothetical ... 29 3.3
AF067217-2|AAF99977.1| 1887|Caenorhabditis elegans Heavy chain, ... 29 3.3
AF039720-2|AAB96698.1| 180|Caenorhabditis elegans C.elegans hom... 29 3.3
Z81489-9|CAE17759.1| 326|Caenorhabditis elegans Hypothetical pr... 29 4.4
Z49072-5|CAA88885.2| 1109|Caenorhabditis elegans Hypothetical pr... 29 4.4
Z49067-4|CAA88853.2| 1109|Caenorhabditis elegans Hypothetical pr... 29 4.4
AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 prote... 28 7.7
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 28 7.7
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 28 7.7
AF134186-1|AAD55361.1| 1359|Caenorhabditis elegans XNP-1 protein. 28 7.7
AF000196-11|AAC24256.1| 1359|Caenorhabditis elegans Human xnp ge... 28 7.7
AC024200-7|AAF36006.1| 332|Caenorhabditis elegans Hypothetical ... 28 7.7
>Z22179-5|CAA80162.2| 786|Caenorhabditis elegans Hypothetical
protein F58A4.5 protein.
Length = 786
Score = 35.1 bits (77), Expect = 0.067
Identities = 28/107 (26%), Positives = 50/107 (46%), Gaps = 6/107 (5%)
Frame = +2
Query: 299 SSSQDENTKTKESVSPPIIIEELSDNMSRQHSGSMEDESEKSDDNQSQKSLDVLLDT-SM 475
SS + E++ ES + E + + + + + +S+ SD ++ QKS +V L S
Sbjct: 419 SSKKSESSSKDESEDSASLNLEQKASAAASAALASKSKSDSSDQSKDQKSANVALAVVSE 478
Query: 476 NK-----PFSPTSSVTSQRKLEWDSLADVGYANESDRKTSASSLSTL 601
NK P P S+ T+ + + D + AN+ T S L+T+
Sbjct: 479 NKHPTKKPEDPKSTKTTTEEPDIDESLNAALANQRSTTTKNSDLTTI 525
>AF016684-13|AAB66203.1| 470|Caenorhabditis elegans Hypothetical
protein F45C12.3 protein.
Length = 470
Score = 32.3 bits (70), Expect = 0.47
Identities = 18/68 (26%), Positives = 33/68 (48%)
Frame = +2
Query: 314 ENTKTKESVSPPIIIEELSDNMSRQHSGSMEDESEKSDDNQSQKSLDVLLDTSMNKPFSP 493
E +K + P++ EL N + G +ED++E + N +K +++ + KP P
Sbjct: 223 EPSKDMIKLEEPVLFSELERNKELEKPGELEDQNE--EVNGPEKPVELEEAEILEKPNEP 280
Query: 494 TSSVTSQR 517
S T +R
Sbjct: 281 MESETLER 288
>Z46241-8|CAA86316.2| 1784|Caenorhabditis elegans Hypothetical protein
C38D4.3 protein.
Length = 1784
Score = 31.9 bits (69), Expect = 0.62
Identities = 30/146 (20%), Positives = 61/146 (41%), Gaps = 3/146 (2%)
Frame = +2
Query: 275 IQCSIPEPSSSQDENTKTKESVSPPIIIEELSDNMSRQHSGSMEDESEKSDD---NQSQK 445
+Q EP ++ + + V P+I EE N S + S +++E ++ D +
Sbjct: 1277 VQQDAKEPEKTEKRQEEPEPEVMQPVIPEE-PQNESLESSIKLQEELQEEPDIVPTGDED 1335
Query: 446 SLDVLLDTSMNKPFSPTSSVTSQRKLEWDSLADVGYANESDRKTSASSLSTLERLALKQQ 625
+ D + + ++ + P+ + S + S + E + S +T R A Q+
Sbjct: 1336 TADKVQEQAVEEDRPPSRNTRSSSVQKSTSQVEDRDPKELVEEERPPSRNT--RSASVQK 1393
Query: 626 YSNNDTKNEMGAPTAQSTPIDENSNA 703
SN + +E G T + P N+ +
Sbjct: 1394 SSNQEKTSESGEVTEEDRPPSRNTRS 1419
>Z32681-1|CAA83608.1| 761|Caenorhabditis elegans Hypothetical
protein F56F3.1 protein.
Length = 761
Score = 31.5 bits (68), Expect = 0.82
Identities = 15/87 (17%), Positives = 41/87 (47%)
Frame = +2
Query: 374 NMSRQHSGSMEDESEKSDDNQSQKSLDVLLDTSMNKPFSPTSSVTSQRKLEWDSLADVGY 553
++ +QH +++ ++ +Q + ++ S+ + +SS Q+K +
Sbjct: 525 SLQQQHQ-NIQQHQQQQQHHQHKGRTPAMIPASVQRQLQKSSSNADQKKEKTSQSPPESN 583
Query: 554 ANESDRKTSASSLSTLERLALKQQYSN 634
SD + +++ L++L ++Q Y+N
Sbjct: 584 QETSDAHNQSDAMNQLKKLHMQQNYAN 610
>U41510-8|AAK39385.1| 493|Caenorhabditis elegans Hypothetical
protein ZC449.5 protein.
Length = 493
Score = 31.5 bits (68), Expect = 0.82
Identities = 30/107 (28%), Positives = 44/107 (41%)
Frame = +2
Query: 284 SIPEPSSSQDENTKTKESVSPPIIIEELSDNMSRQHSGSMEDESEKSDDNQSQKSLDVLL 463
S E S S + + + + S S P E + + +D+ +K D + QK D
Sbjct: 265 STEESSESPETSEEPQSSESTPTSEESTEQSTEKPKKEDKKDKKDKKD--KKQKKEDSEE 322
Query: 464 DTSMNKPFSPTSSVTSQRKLEWDSLADVGYANESDRKTSASSLSTLE 604
D K S +SS DS D +ESD + ASS T+E
Sbjct: 323 DDDDKKSKSSSSS---------DSKTDEKSTSESDSSSEASSEKTVE 360
>Z92828-1|CAB07337.1| 512|Caenorhabditis elegans Hypothetical
protein C37A5.1 protein.
Length = 512
Score = 31.1 bits (67), Expect = 1.1
Identities = 17/44 (38%), Positives = 25/44 (56%)
Frame = +2
Query: 365 LSDNMSRQHSGSMEDESEKSDDNQSQKSLDVLLDTSMNKPFSPT 496
LS S+ H +E+ESE +D +Q+ + VL T +P SPT
Sbjct: 449 LSGITSQSHLPKLEEESETTDPLPAQQPVFVLPRTLSEEPTSPT 492
>U00044-7|AAA50675.1| 990|Caenorhabditis elegans Hypothetical
protein K04C2.2 protein.
Length = 990
Score = 30.7 bits (66), Expect = 1.4
Identities = 27/113 (23%), Positives = 52/113 (46%), Gaps = 3/113 (2%)
Frame = +2
Query: 254 QEVCRI--SIQCSIPEPSSSQDENTKTKESVSPPIIIEEL-SDNMSRQHSGSMEDESEKS 424
+++C I + S E + + DE+ + +E + P E+ S N + S S +D+ E+
Sbjct: 564 KDLCHIVETAMMSEAELAGNDDEDMEDEEGM--PFDESEIPSGNGDDEASDSDDDDEEE- 620
Query: 425 DDNQSQKSLDVLLDTSMNKPFSPTSSVTSQRKLEWDSLADVGYANESDRKTSA 583
DD++ +++D L +N + S +E D L D +R +A
Sbjct: 621 DDDEGNEAVDQELLDKLNAALGDAAPRDSSSDVEMDDLDDEAMQKMDERLAAA 673
>AL132902-10|CAB82002.1| 286|Caenorhabditis elegans Hypothetical
protein Y71A12B.11 protein.
Length = 286
Score = 30.7 bits (66), Expect = 1.4
Identities = 29/125 (23%), Positives = 53/125 (42%), Gaps = 7/125 (5%)
Frame = +2
Query: 305 SQDENTKTKES-----VSPPIIIEELSDNMSRQHSGSMEDESEKSDDNQSQKSLDVLLDT 469
S+DE KE+ S P +++ S E ESE SDD++ ++ ++
Sbjct: 139 SEDEEEVPKETGTYAFESKPEALDDSESEASDVSESKDESESEGSDDSEDEEYVEETCTD 198
Query: 470 SMN--KPFSPTSSVTSQRKLEWDSLADVGYANESDRKTSASSLSTLERLALKQQYSNNDT 643
++N +P S + + + + E D +D ++ + A ST + A K S T
Sbjct: 199 ALNQLEPESDAADESVEEEEEEDEDSDDSDDSDDSEEEEAEG-STAQAPAEKANSSTTTT 257
Query: 644 KNEMG 658
+G
Sbjct: 258 DQNIG 262
>Z80220-2|CAD27608.1| 3185|Caenorhabditis elegans Hypothetical protein
T08G11.1b protein.
Length = 3185
Score = 30.3 bits (65), Expect = 1.9
Identities = 20/79 (25%), Positives = 40/79 (50%), Gaps = 13/79 (16%)
Frame = +2
Query: 284 SIPEPSSSQDENTKTKESVSPPII-------------IEELSDNMSRQHSGSMEDESEKS 424
SIP P + DE TK ++ + P+ +EE+ ++++++ G +DE EK
Sbjct: 778 SIPTPKA--DEKTKAEKELEVPVAKIKDRAKMRTIMEVEEMEEDVTQKEEGGDDDEKEKK 835
Query: 425 DDNQSQKSLDVLLDTSMNK 481
S++ + + LD +N+
Sbjct: 836 -KKTSEQQVQIELDLRLNQ 853
>Z80220-1|CAB02304.1| 3212|Caenorhabditis elegans Hypothetical protein
T08G11.1a protein.
Length = 3212
Score = 30.3 bits (65), Expect = 1.9
Identities = 20/79 (25%), Positives = 40/79 (50%), Gaps = 13/79 (16%)
Frame = +2
Query: 284 SIPEPSSSQDENTKTKESVSPPII-------------IEELSDNMSRQHSGSMEDESEKS 424
SIP P + DE TK ++ + P+ +EE+ ++++++ G +DE EK
Sbjct: 778 SIPTPKA--DEKTKAEKELEVPVAKIKDRAKMRTIMEVEEMEEDVTQKEEGGDDDEKEKK 835
Query: 425 DDNQSQKSLDVLLDTSMNK 481
S++ + + LD +N+
Sbjct: 836 -KKTSEQQVQIELDLRLNQ 853
>U21321-10|AAG00048.2| 325|Caenorhabditis elegans T box family
protein 35 protein.
Length = 325
Score = 30.3 bits (65), Expect = 1.9
Identities = 27/83 (32%), Positives = 37/83 (44%), Gaps = 2/83 (2%)
Frame = +2
Query: 296 PSSSQDENTKTKESVSPPIIIEELS--DNMSRQHSGSMEDESEKSDDNQSQKSLDVLLDT 469
P SSQD K K + + EE +N S S S + S+ D +S L + D
Sbjct: 203 PFSSQDTKKKNKRNTLKAVSQEENQPIENSSFHQSFSNQYLSKPDLDLKSTTLLQIAPDH 262
Query: 470 SMNKPFSPTSSVTSQRKLEWDSL 538
S F PT+ V+S WDS+
Sbjct: 263 S----FEPTNFVSSSHFPCWDSI 281
>DQ340626-1|ABC65814.1| 782|Caenorhabditis elegans chondroitin
proteoglycan-4 protein.
Length = 782
Score = 30.3 bits (65), Expect = 1.9
Identities = 18/64 (28%), Positives = 32/64 (50%), Gaps = 8/64 (12%)
Frame = +2
Query: 272 SIQCSIPEPSSSQDENTKTKESVSPPI--------IIEELSDNMSRQHSGSMEDESEKSD 427
++ + EPS +DE + T SV P+ I+E +S+ + + SGS + S
Sbjct: 474 NVTSTFSEPSEKEDEASTTVISVISPLHTNATDSEILEHISEKSTEESSGSSGEMSGDGS 533
Query: 428 DNQS 439
DN++
Sbjct: 534 DNEA 537
>AF022968-9|AAB69883.3| 782|Caenorhabditis elegans Chondroitin
proteoglycan protein 4 protein.
Length = 782
Score = 30.3 bits (65), Expect = 1.9
Identities = 18/64 (28%), Positives = 32/64 (50%), Gaps = 8/64 (12%)
Frame = +2
Query: 272 SIQCSIPEPSSSQDENTKTKESVSPPI--------IIEELSDNMSRQHSGSMEDESEKSD 427
++ + EPS +DE + T SV P+ I+E +S+ + + SGS + S
Sbjct: 474 NVTSTFSEPSEKEDEASTTVISVISPLHTNATDSEILEHISEKSTEESSGSSGEMSGDGS 533
Query: 428 DNQS 439
DN++
Sbjct: 534 DNEA 537
>U50071-2|AAA93447.2| 6994|Caenorhabditis elegans Uncoordinated
protein 44, isoform f protein.
Length = 6994
Score = 29.9 bits (64), Expect = 2.5
Identities = 31/135 (22%), Positives = 64/135 (47%), Gaps = 14/135 (10%)
Frame = +2
Query: 296 PSSSQDENTKTKESVSPPI--IIEELSDNMSRQHSGSMEDE-----SEKSDDNQSQKSLD 454
P+SS DE + K VSPPI + +S +++ + S +DE +S + + +++
Sbjct: 2089 PTSSDDERSSQKGKVSPPIPQVRHAISPSVASEVLSSHDDELAAHFVAESFEKHDEGNVE 2148
Query: 455 VLLDTSMNK-PFSP--TSSVTSQRKLEWDSLADVGYANESDRKTSAS----SLSTLERLA 613
+ T + K SP TS + S+ + V +E D + S ++ +
Sbjct: 2149 TIEQTPVYKGHHSPGQTSPIVSEHPHAQEYAESVTSHDEGDNLSLKSGHEPEIARHSVAS 2208
Query: 614 LKQQYSNNDTKNEMG 658
++++ ++D K+E+G
Sbjct: 2209 VQEEDDDDDEKSELG 2223
>U39847-1|AAB41827.1| 6994|Caenorhabditis elegans AO13 ankyrin
protein.
Length = 6994
Score = 29.9 bits (64), Expect = 2.5
Identities = 31/135 (22%), Positives = 64/135 (47%), Gaps = 14/135 (10%)
Frame = +2
Query: 296 PSSSQDENTKTKESVSPPI--IIEELSDNMSRQHSGSMEDE-----SEKSDDNQSQKSLD 454
P+SS DE + K VSPPI + +S +++ + S +DE +S + + +++
Sbjct: 2089 PTSSDDERSSQKGKVSPPIPQVRHAISPSVASEVLSSHDDELAAHFVAESFEKHDEGNVE 2148
Query: 455 VLLDTSMNK-PFSP--TSSVTSQRKLEWDSLADVGYANESDRKTSAS----SLSTLERLA 613
+ T + K SP TS + S+ + V +E D + S ++ +
Sbjct: 2149 TIEQTPVYKGHHSPGQTSPIVSEHPHAQEYAESVTSHDEGDNLSLKSGHEPEIARHSVAS 2208
Query: 614 LKQQYSNNDTKNEMG 658
++++ ++D K+E+G
Sbjct: 2209 VQEEDDDDDEKSELG 2223
>U23529-8|AAL32209.1| 682|Caenorhabditis elegans G-protein-linked
acetylcholinereceptor protein 1, isoform a protein.
Length = 682
Score = 29.9 bits (64), Expect = 2.5
Identities = 19/88 (21%), Positives = 38/88 (43%)
Frame = +2
Query: 380 SRQHSGSMEDESEKSDDNQSQKSLDVLLDTSMNKPFSPTSSVTSQRKLEWDSLADVGYAN 559
S Q GS+ E++++ ++ L N+ + P T+ + V +
Sbjct: 270 SNQAGGSLNTENDQNLGVIEEERSGFLSRRESNESYYPGPHPTAANSRRCSEMEKVSLLS 329
Query: 560 ESDRKTSASSLSTLERLALKQQYSNNDT 643
ESD S + RL+L+ +YS +++
Sbjct: 330 ESDGVPSTRPAKSYGRLSLRSRYSASES 357
>U23529-7|AAL32211.1| 622|Caenorhabditis elegans G-protein-linked
acetylcholinereceptor protein 1, isoform c protein.
Length = 622
Score = 29.9 bits (64), Expect = 2.5
Identities = 19/88 (21%), Positives = 38/88 (43%)
Frame = +2
Query: 380 SRQHSGSMEDESEKSDDNQSQKSLDVLLDTSMNKPFSPTSSVTSQRKLEWDSLADVGYAN 559
S Q GS+ E++++ ++ L N+ + P T+ + V +
Sbjct: 270 SNQAGGSLNTENDQNLGVIEEERSGFLSRRESNESYYPGPHPTAANSRRCSEMEKVSLLS 329
Query: 560 ESDRKTSASSLSTLERLALKQQYSNNDT 643
ESD S + RL+L+ +YS +++
Sbjct: 330 ESDGVPSTRPAKSYGRLSLRSRYSASES 357
>AF117301-1|AAF26202.1| 622|Caenorhabditis elegans G protein-linked
acetylcholinereceptor GAR-1c protein.
Length = 622
Score = 29.9 bits (64), Expect = 2.5
Identities = 19/88 (21%), Positives = 38/88 (43%)
Frame = +2
Query: 380 SRQHSGSMEDESEKSDDNQSQKSLDVLLDTSMNKPFSPTSSVTSQRKLEWDSLADVGYAN 559
S Q GS+ E++++ ++ L N+ + P T+ + V +
Sbjct: 270 SNQAGGSLNTENDQNLGVIEEERSGFLSRRESNESYYPGPHPTAANSRRCSEMEKVSLLS 329
Query: 560 ESDRKTSASSLSTLERLALKQQYSNNDT 643
ESD S + RL+L+ +YS +++
Sbjct: 330 ESDGVPSTRPAKSYGRLSLRSRYSASES 357
>AF075245-1|AAD13747.1| 682|Caenorhabditis elegans G protein-linked
acetylcholinereceptor GAR-1b protein.
Length = 682
Score = 29.9 bits (64), Expect = 2.5
Identities = 19/88 (21%), Positives = 38/88 (43%)
Frame = +2
Query: 380 SRQHSGSMEDESEKSDDNQSQKSLDVLLDTSMNKPFSPTSSVTSQRKLEWDSLADVGYAN 559
S Q GS+ E++++ ++ L N+ + P T+ + V +
Sbjct: 270 SNQAGGSLNTENDQNLGVIEEERSGFLSRRESNESYYPGPHPTAANSRRCSEMEKVSLLS 329
Query: 560 ESDRKTSASSLSTLERLALKQQYSNNDT 643
ESD S + RL+L+ +YS +++
Sbjct: 330 ESDGVPSTRPAKSYGRLSLRSRYSASES 357
>AF106579-8|AAC78201.1| 710|Caenorhabditis elegans Hypothetical
protein F54E2.5 protein.
Length = 710
Score = 29.5 bits (63), Expect = 3.3
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = -1
Query: 814 IYINALXSIGYMRXINLHIVRVLFCKFSLFSYPLFQFCITVFIY 683
IYI + I YM+ +L + K S+F + FQ VF++
Sbjct: 599 IYIAIISKIAYMKQSSLSSTEISILKQSIFVFVAFQASSVVFLF 642
>AF067217-2|AAF99977.1| 1887|Caenorhabditis elegans Heavy chain,
unconventional myosinprotein 7 protein.
Length = 1887
Score = 29.5 bits (63), Expect = 3.3
Identities = 20/68 (29%), Positives = 35/68 (51%)
Frame = +2
Query: 278 QCSIPEPSSSQDENTKTKESVSPPIIIEELSDNMSRQHSGSMEDESEKSDDNQSQKSLDV 457
Q S P PS+ TKTK+ + P ++ E +D++ RQ S + +++ N+S D
Sbjct: 1319 QSSSPIPSTGTFSLTKTKQQIDPGNMLVESTDDL-RQFSIFIFNKTRHL--NESNAKRDT 1375
Query: 458 LLDTSMNK 481
++D K
Sbjct: 1376 VVDAVFKK 1383
>AF039720-2|AAB96698.1| 180|Caenorhabditis elegans C.elegans
homeobox protein 12 protein.
Length = 180
Score = 29.5 bits (63), Expect = 3.3
Identities = 24/79 (30%), Positives = 36/79 (45%)
Frame = +2
Query: 272 SIQCSIPEPSSSQDENTKTKESVSPPIIIEELSDNMSRQHSGSMEDESEKSDDNQSQKSL 451
SI + +SSQ+E+ K + SPP I +S S +E K +Q +
Sbjct: 5 SIDSLLKISTSSQNEDQKLESHPSPPSQIP--------NYSTSCSEELMKMAAKAAQFAA 56
Query: 452 DVLLDTSMNKPFSPTSSVT 508
L+ S + SPTS+VT
Sbjct: 57 QASLENSFSSSTSPTSTVT 75
>Z81489-9|CAE17759.1| 326|Caenorhabditis elegans Hypothetical
protein C55A1.12 protein.
Length = 326
Score = 29.1 bits (62), Expect = 4.4
Identities = 11/41 (26%), Positives = 23/41 (56%)
Frame = -1
Query: 811 YINALXSIGYMRXINLHIVRVLFCKFSLFSYPLFQFCITVF 689
+ + + IGY+ + + ++ CKF +F++PL I+ F
Sbjct: 64 HFSVMVKIGYLVFTLMMVGFLIICKFKIFNFPLKALNISTF 104
>Z49072-5|CAA88885.2| 1109|Caenorhabditis elegans Hypothetical protein
C44F1.5 protein.
Length = 1109
Score = 29.1 bits (62), Expect = 4.4
Identities = 12/39 (30%), Positives = 19/39 (48%)
Frame = +2
Query: 521 LEWDSLADVGYANESDRKTSASSLSTLERLALKQQYSNN 637
+ W S +GY NE + ++ L+ E AL + NN
Sbjct: 1056 IRWKSTHSIGYENEYEMQSDVEGLAFEEMAALSRDIRNN 1094
>Z49067-4|CAA88853.2| 1109|Caenorhabditis elegans Hypothetical protein
C44F1.5 protein.
Length = 1109
Score = 29.1 bits (62), Expect = 4.4
Identities = 12/39 (30%), Positives = 19/39 (48%)
Frame = +2
Query: 521 LEWDSLADVGYANESDRKTSASSLSTLERLALKQQYSNN 637
+ W S +GY NE + ++ L+ E AL + NN
Sbjct: 1056 IRWKSTHSIGYENEYEMQSDVEGLAFEEMAALSRDIRNN 1094
>AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 protein
protein.
Length = 10578
Score = 28.3 bits (60), Expect = 7.7
Identities = 27/135 (20%), Positives = 56/135 (41%), Gaps = 5/135 (3%)
Frame = +2
Query: 293 EPSSSQDENTKTKESVSPPIIIEELSDNMSRQHSGSMEDESEKSDDNQS----QKSLDVL 460
E + S++E T E + E + + + +EKSDD+++ +K +
Sbjct: 10123 EKAKSENETVMTTEPQQLEVKSEPKKSDKTETVEKEVASSTEKSDDSKTKEPKEKKKIIK 10182
Query: 461 LDTSMNKPFSPTSSVTSQRKLEWDSLADVGYANESDRKTSASSLSTLERLALKQQYSNND 640
KP + ++S D +D+ + D T + LST + L+++ +
Sbjct: 10183 KKKDTTKPQEASKELSSDES-RIDLESDISLS--LDTVTESDDLSTASTIKLQKESDESG 10239
Query: 641 TKNEMGAPT-AQSTP 682
+ MG + A+ +P
Sbjct: 10240 IDSRMGQTSEAEDSP 10254
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 28.3 bits (60), Expect = 7.7
Identities = 27/135 (20%), Positives = 56/135 (41%), Gaps = 5/135 (3%)
Frame = +2
Query: 293 EPSSSQDENTKTKESVSPPIIIEELSDNMSRQHSGSMEDESEKSDDNQS----QKSLDVL 460
E + S++E T E + E + + + +EKSDD+++ +K +
Sbjct: 10143 EKAKSENETVMTTEPQQLEVKSEPKKSDKTETVEKEVASSTEKSDDSKTKEPKEKKKIIK 10202
Query: 461 LDTSMNKPFSPTSSVTSQRKLEWDSLADVGYANESDRKTSASSLSTLERLALKQQYSNND 640
KP + ++S D +D+ + D T + LST + L+++ +
Sbjct: 10203 KKKDTTKPQEASKELSSDES-RIDLESDISLS--LDTVTESDDLSTASTIKLQKESDESG 10259
Query: 641 TKNEMGAPT-AQSTP 682
+ MG + A+ +P
Sbjct: 10260 IDSRMGQTSEAEDSP 10274
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 28.3 bits (60), Expect = 7.7
Identities = 27/135 (20%), Positives = 56/135 (41%), Gaps = 5/135 (3%)
Frame = +2
Query: 293 EPSSSQDENTKTKESVSPPIIIEELSDNMSRQHSGSMEDESEKSDDNQS----QKSLDVL 460
E + S++E T E + E + + + +EKSDD+++ +K +
Sbjct: 10143 EKAKSENETVMTTEPQQLEVKSEPKKSDKTETVEKEVASSTEKSDDSKTKEPKEKKKIIK 10202
Query: 461 LDTSMNKPFSPTSSVTSQRKLEWDSLADVGYANESDRKTSASSLSTLERLALKQQYSNND 640
KP + ++S D +D+ + D T + LST + L+++ +
Sbjct: 10203 KKKDTTKPQEASKELSSDES-RIDLESDISLS--LDTVTESDDLSTASTIKLQKESDESG 10259
Query: 641 TKNEMGAPT-AQSTP 682
+ MG + A+ +P
Sbjct: 10260 IDSRMGQTSEAEDSP 10274
>AF134186-1|AAD55361.1| 1359|Caenorhabditis elegans XNP-1 protein.
Length = 1359
Score = 28.3 bits (60), Expect = 7.7
Identities = 26/128 (20%), Positives = 50/128 (39%), Gaps = 9/128 (7%)
Frame = +2
Query: 299 SSSQDENTKTKESVSPPIIIEELSDNMSRQHSGSMEDESEKSDDNQSQKSLDVLLDTSMN 478
S DE K+S S + ++ + ++ + S E E SD+ + QKS T
Sbjct: 92 SDESDEEEDRKKSKSKKKVDQKKKEKSKKKRTTS-SSEDEDSDEEREQKSKKKSKKTKKQ 150
Query: 479 KPFSPTSSVTSQRKLEWD---------SLADVGYANESDRKTSASSLSTLERLALKQQYS 631
+ +RK++ A+ ++ D K S S L++ A + S
Sbjct: 151 TSSESSEESEEERKVKKSKKNKEKSVKKRAETSEESDEDEKPSKKSKKGLKKKAKSESES 210
Query: 632 NNDTKNEM 655
++ + E+
Sbjct: 211 ESEDEKEV 218
>AF000196-11|AAC24256.1| 1359|Caenorhabditis elegans Human xnp gene
related protein 1 protein.
Length = 1359
Score = 28.3 bits (60), Expect = 7.7
Identities = 26/128 (20%), Positives = 50/128 (39%), Gaps = 9/128 (7%)
Frame = +2
Query: 299 SSSQDENTKTKESVSPPIIIEELSDNMSRQHSGSMEDESEKSDDNQSQKSLDVLLDTSMN 478
S DE K+S S + ++ + ++ + S E E SD+ + QKS T
Sbjct: 92 SDESDEEEDRKKSKSKKKVDQKKKEKSKKKRTTS-SSEDEDSDEEREQKSKKKSKKTKKQ 150
Query: 479 KPFSPTSSVTSQRKLEWD---------SLADVGYANESDRKTSASSLSTLERLALKQQYS 631
+ +RK++ A+ ++ D K S S L++ A + S
Sbjct: 151 TSSESSEESEEERKVKKSKKNKEKSVKKRAETSEESDEDEKPSKKSKKGLKKKAKSESES 210
Query: 632 NNDTKNEM 655
++ + E+
Sbjct: 211 ESEDEKEV 218
>AC024200-7|AAF36006.1| 332|Caenorhabditis elegans Hypothetical
protein Y71F9AL.8 protein.
Length = 332
Score = 28.3 bits (60), Expect = 7.7
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = -1
Query: 784 YMRXINLHIVRVLFCKFSLFSY 719
+ R N HI+R +FC F F Y
Sbjct: 276 HKRFTNQHIIRAVFCFFQFFEY 297
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,516,204
Number of Sequences: 27780
Number of extensions: 381226
Number of successful extensions: 1454
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 1341
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1444
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2213393798
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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