Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP16_F_J14
         (880 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ...    24   1.6  
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    24   2.1  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    23   2.8  
DQ435334-1|ABD92649.1|  135|Apis mellifera OBP17 protein.              23   4.9  
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    22   6.5  
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    22   8.6  
AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein ...    22   8.6  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           22   8.6  

>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
           protein.
          Length = 1124

 Score = 24.2 bits (50), Expect = 1.6
 Identities = 18/71 (25%), Positives = 33/71 (46%)
 Frame = +2

Query: 299 SSSQDENTKTKESVSPPIIIEELSDNMSRQHSGSMEDESEKSDDNQSQKSLDVLLDTSMN 478
           +SS DE  KT  + +    +  ++ +     SGS E+ S  S++  S  S +   +T+  
Sbjct: 573 NSSNDEGGKTSPNSAVRKCMSPINGS-GASGSGSAENLSSGSNNQTSSASRENTSNTTSM 631

Query: 479 KPFSPTSSVTS 511
           + F P +   S
Sbjct: 632 ESFKPPTLTES 642


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 23.8 bits (49), Expect = 2.1
 Identities = 9/31 (29%), Positives = 18/31 (58%)
 Frame = +2

Query: 365 LSDNMSRQHSGSMEDESEKSDDNQSQKSLDV 457
           L+++ S +H     D S  +D+N+   +LD+
Sbjct: 218 LTNSNSIKHESDNSDYSHTTDENRHSSTLDI 248


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 23.4 bits (48), Expect = 2.8
 Identities = 19/55 (34%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
 Frame = +2

Query: 287 IPEPSSSQDENTKTKESVSPPIIIEELSD-NMSRQHSGSMEDESEKSDDNQSQKS 448
           IPE SS+  E TK      PP  I ++SD + +   SG   D  E      S+ S
Sbjct: 399 IPESSSNLQEKTKIDLLEIPP--IRKISDCSTTSSLSGDESDVVELQPVKSSKSS 451


>DQ435334-1|ABD92649.1|  135|Apis mellifera OBP17 protein.
          Length = 135

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 12/38 (31%), Positives = 21/38 (55%)
 Frame = +2

Query: 275 IQCSIPEPSSSQDENTKTKESVSPPIIIEELSDNMSRQ 388
           I+C++ +  +  DEN    E +S  I+   L+DN + Q
Sbjct: 63  IECTMKK-FNVVDENANFNEKISSDIVRAVLNDNEADQ 99


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 6/16 (37%), Positives = 11/16 (68%)
 Frame = -3

Query: 566 HFHWHIQHRQENPIQV 519
           H+HWH+ +  E  I++
Sbjct: 209 HWHWHLVYPFEGDIRI 224


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = +1

Query: 361 RTVGQYVEAAFWKHGG 408
           RT  Q +   FW HGG
Sbjct: 116 RTPSQSLPVIFWIHGG 131


>AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein
           protein.
          Length = 352

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 8/34 (23%), Positives = 14/34 (41%)
 Frame = +2

Query: 341 SPPIIIEELSDNMSRQHSGSMEDESEKSDDNQSQ 442
           SPP++  ++   M  QH      + +     Q Q
Sbjct: 160 SPPLVESQMHHQMHTQHPHMQPQQGQHQSQAQQQ 193


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = +1

Query: 361 RTVGQYVEAAFWKHGG 408
           RT  Q +   FW HGG
Sbjct: 116 RTPSQSLPVIFWIHGG 131


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 225,467
Number of Sequences: 438
Number of extensions: 4623
Number of successful extensions: 13
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28523595
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)