Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP16_F_J06
(905 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC777.10c |ubc12||ubiquitin conjugating enzyme Ubc12|Schizosac... 97 3e-21
SPAC1250.03 |ubc14||ubiquitin conjugating enzyme Ubc14|Schizosac... 67 3e-12
SPBC119.02 |ubc4||ubiquitin conjugating enzyme Ubc4|Schizosaccha... 61 2e-10
SPCC1259.15c |ubc11|ubcdp, ubcp4|ubiquitin conjugating enzyme E2... 58 1e-09
SPAC11E3.04c |ubc13|spu13|ubiquitin conjugating enzyme Ubc13|Sch... 55 1e-08
SPBC2D10.20 |ubc1||ubiquitin conjugating enzyme Ubc1|Schizosacch... 54 3e-08
SPBC1105.09 |ubc15||ubiquitin conjugating enzyme Ubc15|Schizosac... 53 6e-08
SPBC1198.09 |ubc16||ubiquitin conjugating enzyme Ubc16|Schizosac... 50 3e-07
SPAC18B11.07c |rhp6|ubc2|Rad6 homolog, ubiquitin conjugating enz... 46 6e-06
SPBP16F5.04 |ubc3|ubcp3|ubiquitin conjugating enzyme Ubc3|Schizo... 46 6e-06
SPAC30D11.13 |hus5|ubc9|SUMO conjugating enzyme Hus5|Schizosacch... 43 5e-05
SPBC211.07c |ubc8||ubiquitin conjugating enzyme Ubc8|Schizosacch... 41 3e-04
SPAPB24D3.09c |pdr1||ABC transporter Pdr1|Schizosaccharomyces po... 32 0.13
SPAC328.08c |||tubulin specific chaperone cofactor C |Schizosacc... 31 0.30
SPBC18E5.02c ||SPBC29A3.20c|serine palmitoyltransferase complex ... 29 0.69
SPAC10F6.05c |ubc6||ubiquitin conjugating enzyme Ubc6|Schizosacc... 28 2.1
SPCC18B5.01c |bfr1|hba2, SPCPJ732.04c|brefeldin A efflux transpo... 27 3.7
SPAC4F10.04 |||protein phosphatase type 2A, intrinsic regulator ... 27 3.7
SPBC19F8.06c |meu22||amino acid permease, unknown 11|Schizosacch... 27 3.7
>SPCC777.10c |ubc12||ubiquitin conjugating enzyme
Ubc12|Schizosaccharomyces pombe|chr 3|||Manual
Length = 177
Score = 97.1 bits (231), Expect = 3e-21
Identities = 43/72 (59%), Positives = 54/72 (75%), Gaps = 2/72 (2%)
Frame = +3
Query: 237 ATQNSLXPDDL-LN-FKLIICPDEGFYRGGKFVFSFKVGPNYPHEPPKVKCETAVYHPNI 410
+T ++ PD + LN L I PDEG+Y+GGKF F ++ NYPH+PPKVKC +YHPNI
Sbjct: 39 STMSTSWPDPIKLNVLHLEIRPDEGYYKGGKFKFRIQIDDNYPHDPPKVKCLNKIYHPNI 98
Query: 411 DLEGNVCLNILR 446
D+EGNVCLNILR
Sbjct: 99 DIEGNVCLNILR 110
Score = 49.6 bits (113), Expect = 6e-07
Identities = 23/49 (46%), Positives = 31/49 (63%)
Frame = +2
Query: 500 YLFLEPNPEDPLNKEAADELQSNRRLFEQHVQRAMRGGYVGTSYFERCL 646
+LFL PN EDPLNKEAA +L + + F V+ AM+GG V F+ +
Sbjct: 128 FLFLSPNAEDPLNKEAAADLHKDPQGFASRVRTAMKGGLVNGISFDNVM 176
Score = 34.7 bits (76), Expect = 0.018
Identities = 18/52 (34%), Positives = 31/52 (59%)
Frame = +2
Query: 98 MIKLFSLKQQKEDEEGSTRGGGSQKKASAAQLRITKDLNELNLPKTCNTEFP 253
M K++ LK+++ +E + G S AQ+RI KD+ +L +P T +T +P
Sbjct: 1 MRKIWELKKKEAQKEKNASG------ISPAQIRIQKDVTDLEIPSTMSTSWP 46
Score = 30.3 bits (65), Expect = 0.39
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = +1
Query: 451 DWKPVLTVNSIVYGLQXFIL 510
DW PVL +NSI+ GLQ L
Sbjct: 112 DWNPVLNLNSILVGLQFLFL 131
>SPAC1250.03 |ubc14||ubiquitin conjugating enzyme
Ubc14|Schizosaccharomyces pombe|chr 1|||Manual
Length = 155
Score = 67.3 bits (157), Expect = 3e-12
Identities = 35/81 (43%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Frame = +3
Query: 249 SLXPDDLLNFKLI-ICPDEGFYRGGKFVFSFKVGPNYPHEPPKVKCETAVYHPNIDLEGN 425
+L D+L ++ + P + Y GGKF FS K +YP +PP ++ T +YHPN D EGN
Sbjct: 30 NLVDDNLFHWACTALGPSDSVYAGGKFHFSLKFPLDYPFQPPTIEFTTRIYHPNFDSEGN 89
Query: 426 VCLNILRXRLETCSHSKLHSV 488
VCL IL+ ++ S KL SV
Sbjct: 90 VCLAILKQQVFKPS-IKLRSV 109
Score = 28.7 bits (61), Expect = 1.2
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = +2
Query: 503 LFLEPNPEDPLNKEAADELQSNRRLFEQ 586
L EPNP+DPL A++ +++R F++
Sbjct: 116 LLREPNPDDPLVASIAEQYRNDRPSFDK 143
>SPBC119.02 |ubc4||ubiquitin conjugating enzyme
Ubc4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 147
Score = 61.3 bits (142), Expect = 2e-10
Identities = 28/63 (44%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Frame = +3
Query: 261 DDLLNFKLIIC-PDEGFYRGGKFVFSFKVGPNYPHEPPKVKCETAVYHPNIDLEGNVCLN 437
DDL +++ I P + Y GG F S +YP +PPKV T +YHPNI+ G++CL+
Sbjct: 28 DDLFHWQATIMGPADSPYAGGVFFLSIHFPTDYPFKPPKVNFTTRIYHPNINSNGSICLD 87
Query: 438 ILR 446
ILR
Sbjct: 88 ILR 90
Score = 27.1 bits (57), Expect = 3.7
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +2
Query: 503 LFLEPNPEDPLNKEAADELQSNRRLFE 583
L +PNP+DPL E A +++R +E
Sbjct: 109 LLTDPNPDDPLVPEIAHVYKTDRSRYE 135
>SPCC1259.15c |ubc11|ubcdp, ubcp4|ubiquitin conjugating enzyme E2-C
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 176
Score = 58.4 bits (135), Expect = 1e-09
Identities = 21/53 (39%), Positives = 34/53 (64%)
Frame = +3
Query: 294 PDEGFYRGGKFVFSFKVGPNYPHEPPKVKCETAVYHPNIDLEGNVCLNILRXR 452
P + +Y G KF S NYP+ PP + + ++HPN+D+ GN+CL+IL+ +
Sbjct: 68 PSDTYYEGLKFKISMSFPANYPYSPPTIIFTSPMWHPNVDMSGNICLDILKDK 120
>SPAC11E3.04c |ubc13|spu13|ubiquitin conjugating enzyme
Ubc13|Schizosaccharomyces pombe|chr 1|||Manual
Length = 148
Score = 55.2 bits (127), Expect = 1e-08
Identities = 25/63 (39%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Frame = +3
Query: 261 DDLLNFKLII-CPDEGFYRGGKFVFSFKVGPNYPHEPPKVKCETAVYHPNIDLEGNVCLN 437
D+L FK+ + P + Y GGKF + YP PP V+ T +YHPN+D G +CL+
Sbjct: 29 DNLRYFKITMEGPQQSAYEGGKFHLELFLPDEYPMMPPNVRFLTKIYHPNVDKLGRICLS 88
Query: 438 ILR 446
L+
Sbjct: 89 TLK 91
>SPBC2D10.20 |ubc1||ubiquitin conjugating enzyme
Ubc1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 217
Score = 54.0 bits (124), Expect = 3e-08
Identities = 25/64 (39%), Positives = 39/64 (60%), Gaps = 2/64 (3%)
Frame = +3
Query: 261 DDLLNFKLIICPDEGF-YRGGKFVFSFKVGPNYPHEPPKVKCETAVYHPNIDLE-GNVCL 434
DD+ + K + EG Y GG FV ++ +YP PPK+ +T +YHPN+ + G +CL
Sbjct: 31 DDISHLKGMFRGPEGTPYEGGYFVVDIEIPIDYPFRPPKMNFDTKIYHPNVSSQTGAICL 90
Query: 435 NILR 446
+IL+
Sbjct: 91 DILK 94
>SPBC1105.09 |ubc15||ubiquitin conjugating enzyme
Ubc15|Schizosaccharomyces pombe|chr 2|||Manual
Length = 167
Score = 52.8 bits (121), Expect = 6e-08
Identities = 22/54 (40%), Positives = 33/54 (61%)
Frame = +3
Query: 282 LIICPDEGFYRGGKFVFSFKVGPNYPHEPPKVKCETAVYHPNIDLEGNVCLNIL 443
+II P++ Y GG F + +YP PPK+K T ++HPN+ G VC++IL
Sbjct: 41 MIIGPEDTLYEGGFFHATLSFPQDYPLMPPKMKFTTEIWHPNVHPNGEVCISIL 94
Score = 30.7 bits (66), Expect = 0.30
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +2
Query: 515 PNPEDPLNKEAADELQSNRRLFEQHVQRAMR 607
PN E P N +AA E + N + F++ V+R +R
Sbjct: 131 PNDESPANIDAAKEFRENPQEFKKRVRRLVR 161
>SPBC1198.09 |ubc16||ubiquitin conjugating enzyme
Ubc16|Schizosaccharomyces pombe|chr 2|||Manual
Length = 160
Score = 50.4 bits (115), Expect = 3e-07
Identities = 25/63 (39%), Positives = 36/63 (57%), Gaps = 2/63 (3%)
Frame = +3
Query: 264 DLLNFKLII-CPDEGFYRGGKFVFSFKVGPNYPHEPPKVKCETAVYHPNID-LEGNVCLN 437
D+ ++K +I P E Y GG++V V YP PP V +T + HPNI G VC++
Sbjct: 33 DMFHWKAVIEGPTETPYEGGQWVLDIHVHEGYPISPPSVYFQTKIVHPNISWTNGEVCMD 92
Query: 438 ILR 446
IL+
Sbjct: 93 ILK 95
>SPAC18B11.07c |rhp6|ubc2|Rad6 homolog, ubiquitin conjugating enzyme
E2 Rhp6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 151
Score = 46.4 bits (105), Expect = 6e-06
Identities = 20/57 (35%), Positives = 32/57 (56%)
Frame = +3
Query: 282 LIICPDEGFYRGGKFVFSFKVGPNYPHEPPKVKCETAVYHPNIDLEGNVCLNILRXR 452
+II P + + G F YP++PP VK + ++HPN+ G +CL+IL+ R
Sbjct: 39 VIIGPADTPFEDGTFKLVLSFDEQYPNKPPLVKFVSTMFHPNVYANGELCLDILQNR 95
>SPBP16F5.04 |ubc3|ubcp3|ubiquitin conjugating enzyme
Ubc3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 166
Score = 46.4 bits (105), Expect = 6e-06
Identities = 22/62 (35%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Frame = +3
Query: 261 DDLLNFKLIIC-PDEGFYRGGKFVFSFKVGPNYPHEPPKVKCETAVYHPNIDLEGNVCLN 437
DD + +I PD + GG + + K +YP PP +K E +HPN+ +G VC++
Sbjct: 33 DDFFTWDCLIQGPDGTPFEGGLYPATLKFPSDYPLGPPTLKFECEFFHPNVYKDGTVCIS 92
Query: 438 IL 443
IL
Sbjct: 93 IL 94
>SPAC30D11.13 |hus5|ubc9|SUMO conjugating enzyme
Hus5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 157
Score = 43.2 bits (97), Expect = 5e-05
Identities = 21/61 (34%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Frame = +3
Query: 264 DLLNFKL-IICPDEGFYRGGKFVFSFKVGPNYPHEPPKVKCETAVYHPNIDLEGNVCLNI 440
DL+N+K+ I + + GG + + YP PPK + ++HPN+ G VCL+I
Sbjct: 37 DLMNWKVGIPGKPKTSWEGGLYKLTMAFPEEYPTRPPKCRFTPPLFHPNVYPSGTVCLSI 96
Query: 441 L 443
L
Sbjct: 97 L 97
>SPBC211.07c |ubc8||ubiquitin conjugating enzyme
Ubc8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 184
Score = 40.7 bits (91), Expect = 3e-04
Identities = 18/51 (35%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Frame = +3
Query: 294 PDEGFYRGGKFVFSFKVGPNYPHEPPKVKCETAVYHPNID-LEGNVCLNIL 443
P E Y GG + ++ YP + P + ++HPNID L G+VCL+++
Sbjct: 39 PSETPYSGGIWKVHVELPSEYPWKSPSIGFVNRIFHPNIDELSGSVCLDVI 89
>SPAPB24D3.09c |pdr1||ABC transporter Pdr1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1396
Score = 31.9 bits (69), Expect = 0.13
Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Frame = -1
Query: 527 LQGLVPRINXWRPYTMEFTVRTGFQSXPEYIQAHVAFEVYVRMINCCFT--FDFGW 366
+ GL P+ +R ++ T S +I +AF + +INCCF F FGW
Sbjct: 1137 MNGLQPKFIYFRSIYEQYEQNTAIYSRTAFI---IAFFLVEAVINCCFATLFFFGW 1189
>SPAC328.08c |||tubulin specific chaperone cofactor C
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 259
Score = 30.7 bits (66), Expect = 0.30
Identities = 14/65 (21%), Positives = 29/65 (44%)
Frame = +3
Query: 483 SVRSPXIYSWNQTLKIPSTRKQRTSSKATGDFSNNTFRELCEAATSAHLISNDASNENLH 662
+ +P +Y N TL + + + Q +N + ++ S ++ ++ S+ NLH
Sbjct: 108 NAEAPEVYFENDTLYLANLKNQNIGDNVIPYPNNKAVKVSAKSLRSCNISISNCSSVNLH 167
Query: 663 TCKKC 677
KC
Sbjct: 168 NATKC 172
>SPBC18E5.02c ||SPBC29A3.20c|serine palmitoyltransferase complex
subunit |Schizosaccharomyces pombe|chr 2|||Manual
Length = 509
Score = 29.5 bits (63), Expect = 0.69
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +3
Query: 102 LNFFH*NNRKKMKRVLPEEEDHKKKHQQP 188
+ +F NN K ++R+L E ED KH +P
Sbjct: 235 IRYFKHNNMKDLERILQELEDDFVKHNRP 263
>SPAC10F6.05c |ubc6||ubiquitin conjugating enzyme
Ubc6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 227
Score = 27.9 bits (59), Expect = 2.1
Identities = 13/44 (29%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Frame = +3
Query: 261 DDLLNFKLIIC-PDEGFYRGGKFVFSFKVGPNYPHEPPKVKCET 389
+++L + II P + Y GG++ + P+YP +PP ++ T
Sbjct: 32 ENILEWHYIITGPPDTPYEGGQYHGTLIFPPDYPFKPPAIRMIT 75
>SPCC18B5.01c |bfr1|hba2, SPCPJ732.04c|brefeldin A efflux transporter
Bfr1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1530
Score = 27.1 bits (57), Expect = 3.7
Identities = 17/58 (29%), Positives = 24/58 (41%)
Frame = -1
Query: 515 VPRINXWRPYTMEFTVRTGFQSXPEYIQAHVAFEVYVRMINCCFTFDFGWLVRIIWSY 342
VP IN +P +E + P I + VAF ++ F FG L + W Y
Sbjct: 1264 VPLINGLQPKFIELRNVFEVREKPSNIYSWVAFVFSAIIVEIPFNLVFGTLFFLCWFY 1321
>SPAC4F10.04 |||protein phosphatase type 2A, intrinsic regulator
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 325
Score = 27.1 bits (57), Expect = 3.7
Identities = 14/46 (30%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
Frame = +3
Query: 237 ATQNSLXPDDLLNFKLII--CPDEGFYRGGKFVFSFKVGPNYPHEP 368
A+ + + PD +LN K++ ++ KF+ K GP Y H P
Sbjct: 230 ASSSIIKPDAILNKKIVDEKANSNLYFSAIKFINVMKKGPFYEHSP 275
>SPBC19F8.06c |meu22||amino acid permease, unknown
11|Schizosaccharomyces pombe|chr 2|||Manual
Length = 574
Score = 27.1 bits (57), Expect = 3.7
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = +2
Query: 530 PLNKEAADELQSNRRLFEQHVQRAMRGGYVGTSYF 634
PL E +LQ R+L +H+Q GG VGT F
Sbjct: 49 PLQPEDTQDLQ--RKLKPRHMQMIAIGGCVGTGLF 81
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,752,397
Number of Sequences: 5004
Number of extensions: 53584
Number of successful extensions: 175
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 160
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 175
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 458501510
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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