Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP16_F_J06
(905 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81108-2|CAB03238.1| 180|Caenorhabditis elegans Hypothetical pr... 74 1e-13
Z68337-1|CAA92745.1| 147|Caenorhabditis elegans Hypothetical pr... 62 5e-10
S56051-1|AAB25489.2| 147|Caenorhabditis elegans ubiquitin-conju... 62 5e-10
Z22179-13|CAA80166.1| 164|Caenorhabditis elegans Hypothetical p... 58 7e-09
U00035-7|AAA50648.2| 153|Caenorhabditis elegans Ubiquitin conju... 58 7e-09
AC025726-12|AAK73914.3| 243|Caenorhabditis elegans Ubiquitin co... 54 1e-07
U08139-1|AAA83388.1| 192|Caenorhabditis elegans ubc-1 protein. 54 2e-07
AF045638-8|AAC02561.2| 192|Caenorhabditis elegans Ubiquitin con... 54 2e-07
AC024817-43|AAK93865.2| 151|Caenorhabditis elegans Ubiquitin co... 53 2e-07
AF099919-11|AAC68796.1| 199|Caenorhabditis elegans Ubiquitin co... 50 3e-06
AL032653-6|CAA21716.1| 152|Caenorhabditis elegans Hypothetical ... 47 2e-05
AL110500-10|CAB60431.1| 170|Caenorhabditis elegans Hypothetical... 46 3e-05
U41026-5|AAA82352.2| 546|Caenorhabditis elegans Ubiquitin conju... 44 1e-04
U70849-3|AAK67232.1| 166|Caenorhabditis elegans Ubiquitin conju... 40 0.002
AF106565-1|AAC97374.1| 166|Caenorhabditis elegans ubiquitin-con... 40 0.002
U39674-5|AAA80415.2| 229|Caenorhabditis elegans Ubiquitin conju... 39 0.006
Z66520-3|CAA91389.2| 160|Caenorhabditis elegans Hypothetical pr... 38 0.007
U40411-1|AAC47063.2| 679|Caenorhabditis elegans Ubiquitin conju... 36 0.040
AC024876-5|AAF60891.2| 221|Caenorhabditis elegans Ubiquitin con... 35 0.070
U13644-3|AAB52677.1| 230|Caenorhabditis elegans Ubiquitin e2 (c... 34 0.12
Z81516-5|CAB04202.1| 219|Caenorhabditis elegans Hypothetical pr... 32 0.65
Z92834-2|CAB07383.1| 139|Caenorhabditis elegans Hypothetical pr... 30 2.6
Z81040-3|CAB02783.3| 444|Caenorhabditis elegans Hypothetical pr... 30 2.6
Z47808-7|CAA87771.2| 934|Caenorhabditis elegans Hypothetical pr... 29 3.5
>Z81108-2|CAB03238.1| 180|Caenorhabditis elegans Hypothetical
protein R09B3.4 protein.
Length = 180
Score = 74.1 bits (174), Expect = 1e-13
Identities = 32/60 (53%), Positives = 41/60 (68%)
Frame = +3
Query: 267 LLNFKLIICPDEGFYRGGKFVFSFKVGPNYPHEPPKVKCETAVYHPNIDLEGNVCLNILR 446
L +L + P EG YRGGKF F V P Y + PP VKC T V+HPNI+ +G++CL+ILR
Sbjct: 58 LHELELTVTPQEGIYRGGKFRFKITVPPEYNNVPPVVKCLTKVWHPNINEDGSICLSILR 117
>Z68337-1|CAA92745.1| 147|Caenorhabditis elegans Hypothetical
protein M7.1 protein.
Length = 147
Score = 62.1 bits (144), Expect = 5e-10
Identities = 28/63 (44%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
Frame = +3
Query: 261 DDLLNFKLIIC-PDEGFYRGGKFVFSFKVGPNYPHEPPKVKCETAVYHPNIDLEGNVCLN 437
DDL +++ I P E Y+GG F + +YP +PPKV T +YHPNI+ G++CL+
Sbjct: 28 DDLFHWQATIMGPPESPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLD 87
Query: 438 ILR 446
ILR
Sbjct: 88 ILR 90
>S56051-1|AAB25489.2| 147|Caenorhabditis elegans
ubiquitin-conjugating enzyme protein.
Length = 147
Score = 62.1 bits (144), Expect = 5e-10
Identities = 28/63 (44%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
Frame = +3
Query: 261 DDLLNFKLIIC-PDEGFYRGGKFVFSFKVGPNYPHEPPKVKCETAVYHPNIDLEGNVCLN 437
DDL +++ I P E Y+GG F + +YP +PPKV T +YHPNI+ G++CL+
Sbjct: 28 DDLFHWQATIMGPPESPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLD 87
Query: 438 ILR 446
ILR
Sbjct: 88 ILR 90
>Z22179-13|CAA80166.1| 164|Caenorhabditis elegans Hypothetical
protein F58A4.10 protein.
Length = 164
Score = 58.4 bits (135), Expect = 7e-09
Identities = 25/54 (46%), Positives = 35/54 (64%)
Frame = +3
Query: 282 LIICPDEGFYRGGKFVFSFKVGPNYPHEPPKVKCETAVYHPNIDLEGNVCLNIL 443
L+I P + Y GG F +YP +PPK+K + ++HPNID EGNVC++IL
Sbjct: 39 LVIGPPDTLYEGGFFKAILDFPRDYPQKPPKMKFISEIWHPNIDKEGNVCISIL 92
>U00035-7|AAA50648.2| 153|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein18 protein.
Length = 153
Score = 58.4 bits (135), Expect = 7e-09
Identities = 25/60 (41%), Positives = 36/60 (60%)
Frame = +3
Query: 264 DLLNFKLIICPDEGFYRGGKFVFSFKVGPNYPHEPPKVKCETAVYHPNIDLEGNVCLNIL 443
+LL + +++ PD+ Y G F +YP +PPKV ET +YHPN+D EG CL I+
Sbjct: 31 NLLKWTVLLIPDKEPYNKGAFKVGITFPVDYPFKPPKVAFETKIYHPNVDEEGKFCLPIV 90
>AC025726-12|AAK73914.3| 243|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein3 protein.
Length = 243
Score = 54.0 bits (124), Expect = 1e-07
Identities = 26/79 (32%), Positives = 41/79 (51%)
Frame = +3
Query: 294 PDEGFYRGGKFVFSFKVGPNYPHEPPKVKCETAVYHPNIDLEGNVCLNILRXRLETCSHS 473
P + Y+GG F S + NYP+ PP +K T V+HPN+ G++C++IL ++
Sbjct: 49 PPKTLYQGGYFKASIRFPSNYPYSPPSMKFTTKVWHPNVYENGDLCISILHSPIDDPQSG 108
Query: 474 KLHSVRSPXIYSWNQTLKI 530
+L R WN T +
Sbjct: 109 ELACER------WNPTQSV 121
>U08139-1|AAA83388.1| 192|Caenorhabditis elegans ubc-1 protein.
Length = 192
Score = 53.6 bits (123), Expect = 2e-07
Identities = 24/65 (36%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Frame = +3
Query: 261 DDLLNFKLIIC-PDEGFYRGGKFVFSFKVGPNYPHEPPKVKCETAVYHPNIDLEGNVCLN 437
D++L ++ II P E + G F S + YP++PP VK + ++HPN+ +G++CL+
Sbjct: 31 DNILTWEAIIFGPQETPFEDGTFKLSLEFTEEYPNKPPTVKFISKMFHPNVYADGSICLD 90
Query: 438 ILRXR 452
IL+ R
Sbjct: 91 ILQNR 95
Score = 34.7 bits (76), Expect = 0.092
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = +2
Query: 512 EPNPEDPLNKEAADELQSNRRLFEQHVQRAMRGGYV 619
EPNP P N AA Q NRR +E+ VQ+ + ++
Sbjct: 115 EPNPNSPANSLAAQLYQENRREYEKRVQQIVEQSWL 150
>AF045638-8|AAC02561.2| 192|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein1 protein.
Length = 192
Score = 53.6 bits (123), Expect = 2e-07
Identities = 24/65 (36%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Frame = +3
Query: 261 DDLLNFKLIIC-PDEGFYRGGKFVFSFKVGPNYPHEPPKVKCETAVYHPNIDLEGNVCLN 437
D++L ++ II P E + G F S + YP++PP VK + ++HPN+ +G++CL+
Sbjct: 31 DNILTWEAIIFGPQETPFEDGTFKLSLEFTEEYPNKPPTVKFISKMFHPNVYADGSICLD 90
Query: 438 ILRXR 452
IL+ R
Sbjct: 91 ILQNR 95
Score = 34.7 bits (76), Expect = 0.092
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = +2
Query: 512 EPNPEDPLNKEAADELQSNRRLFEQHVQRAMRGGYV 619
EPNP P N AA Q NRR +E+ VQ+ + ++
Sbjct: 115 EPNPNSPANSLAAQLYQENRREYEKRVQQIVEQSWL 150
>AC024817-43|AAK93865.2| 151|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein13 protein.
Length = 151
Score = 53.2 bits (122), Expect = 2e-07
Identities = 23/57 (40%), Positives = 33/57 (57%)
Frame = +3
Query: 282 LIICPDEGFYRGGKFVFSFKVGPNYPHEPPKVKCETAVYHPNIDLEGNVCLNILRXR 452
+I PD+ + GG F + YP PKV+ T +YHPNID G +CL+IL+ +
Sbjct: 39 MIAGPDDSPFAGGVFKLELFLPEEYPMAAPKVRFMTKIYHPNIDKLGRICLDILKDK 95
>AF099919-11|AAC68796.1| 199|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein20 protein.
Length = 199
Score = 49.6 bits (113), Expect = 3e-06
Identities = 21/52 (40%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Frame = +3
Query: 294 PDEGFYRGGKFVFSFKVGPNYPHEPPKVKCETAVYHPNIDLE-GNVCLNILR 446
P + Y GG F K+ YP PP VK T ++HPN+ + G +CL+IL+
Sbjct: 46 PPDTPYAGGMFDLDIKIPDQYPFSPPNVKFSTKIWHPNVSSQTGVICLDILK 97
>AL032653-6|CAA21716.1| 152|Caenorhabditis elegans Hypothetical
protein Y54E5B.4 protein.
Length = 152
Score = 46.8 bits (106), Expect = 2e-05
Identities = 26/69 (37%), Positives = 37/69 (53%), Gaps = 3/69 (4%)
Frame = +3
Query: 246 NSLXPDDLLNFKLIICPDEG-FYRGGKFVFSFKVGPNYPHEPPKVKC--ETAVYHPNIDL 416
N+ +DL +K+ + EG Y G F+ F GP YP P+V ET HP+I
Sbjct: 28 NTSTSNDLKQWKIGVVGAEGTLYAGEVFMLQFTFGPQYPFNSPEVMFVGETIPAHPHIYS 87
Query: 417 EGNVCLNIL 443
G++CL+IL
Sbjct: 88 NGHICLSIL 96
>AL110500-10|CAB60431.1| 170|Caenorhabditis elegans Hypothetical
protein Y87G2A.9 protein.
Length = 170
Score = 46.4 bits (105), Expect = 3e-05
Identities = 20/54 (37%), Positives = 30/54 (55%)
Frame = +3
Query: 282 LIICPDEGFYRGGKFVFSFKVGPNYPHEPPKVKCETAVYHPNIDLEGNVCLNIL 443
LI P+E + G F +YP PPK++ ++HPNI +G VC++IL
Sbjct: 40 LITGPEETCFANGVFPARITFPQDYPLSPPKMRFTCGIFHPNIYADGRVCISIL 93
>U41026-5|AAA82352.2| 546|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein23 protein.
Length = 546
Score = 44.4 bits (100), Expect = 1e-04
Identities = 18/48 (37%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Frame = +3
Query: 297 DEGFYRGGKFVFSFKVGPNYPHEPPKVKCETAVYHPNID-LEGNVCLN 437
+E Y GG F K+G +YP + P VK T ++HP++ +G +CL+
Sbjct: 389 EETPYEGGIFELDIKIGESYPFKAPTVKFITKIWHPSVSPFDGTICLH 436
>U70849-3|AAK67232.1| 166|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein9 protein.
Length = 166
Score = 40.3 bits (90), Expect = 0.002
Identities = 16/45 (35%), Positives = 25/45 (55%)
Frame = +3
Query: 309 YRGGKFVFSFKVGPNYPHEPPKVKCETAVYHPNIDLEGNVCLNIL 443
+ GG + ++P PPK K E ++HPN+ G VCL++L
Sbjct: 53 WEGGLYRIRMLFKDDFPSTPPKCKFEPPLFHPNVYPSGTVCLSLL 97
>AF106565-1|AAC97374.1| 166|Caenorhabditis elegans
ubiquitin-conjugating enzyme 9homolog protein.
Length = 166
Score = 40.3 bits (90), Expect = 0.002
Identities = 16/45 (35%), Positives = 25/45 (55%)
Frame = +3
Query: 309 YRGGKFVFSFKVGPNYPHEPPKVKCETAVYHPNIDLEGNVCLNIL 443
+ GG + ++P PPK K E ++HPN+ G VCL++L
Sbjct: 53 WEGGLYRIRMLFKDDFPSTPPKCKFEPPLFHPNVYPSGTVCLSLL 97
>U39674-5|AAA80415.2| 229|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein21 protein.
Length = 229
Score = 38.7 bits (86), Expect = 0.006
Identities = 27/81 (33%), Positives = 40/81 (49%), Gaps = 17/81 (20%)
Frame = +3
Query: 261 DDLLNFKLIICPDEGF-YRGGKFVFSFKVGPNYPHEPPKV---------------KCETA 392
++L++ K I EG Y GG F + +YP EPPKV K T
Sbjct: 48 NNLMDIKGFIKGPEGTPYAGGTFEIKVDIPEHYPFEPPKVTEIIFHIRAFEYIQAKFVTR 107
Query: 393 VYHPNIDLE-GNVCLNILRXR 452
++HPNI + G +CL+IL+ +
Sbjct: 108 IWHPNISSQTGTICLDILKDK 128
>Z66520-3|CAA91389.2| 160|Caenorhabditis elegans Hypothetical
protein F49E12.4 protein.
Length = 160
Score = 38.3 bits (85), Expect = 0.007
Identities = 19/50 (38%), Positives = 26/50 (52%)
Frame = +3
Query: 264 DLLNFKLIICPDEGFYRGGKFVFSFKVGPNYPHEPPKVKCETAVYHPNID 413
D+ FK+I D Y+ F + V YP +PP +K VYHPN+D
Sbjct: 44 DIFQFKII--GDGVLYKNMIFTLTLDVNVEYPFKPPYLKFCHNVYHPNVD 91
>U40411-1|AAC47063.2| 679|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein17 protein.
Length = 679
Score = 35.9 bits (79), Expect = 0.040
Identities = 21/59 (35%), Positives = 28/59 (47%), Gaps = 5/59 (8%)
Frame = +3
Query: 282 LIICPDEGFYRGGKFVFSFKVGPNYPHEPPKVKCET-----AVYHPNIDLEGNVCLNIL 443
LI PD+ Y G F F YP PPK T ++PN+ +G +CL+IL
Sbjct: 448 LISGPDDTPYANGLFEFDIFFPTGYPFSPPKCAFLTTGSGNVRFNPNLYNDGKICLSIL 506
>AC024876-5|AAF60891.2| 221|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein8 protein.
Length = 221
Score = 35.1 bits (77), Expect = 0.070
Identities = 15/51 (29%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = +3
Query: 294 PDEGFYRGGKFVFSFKVGPNYPHEPPKVKCETAVYHPNID-LEGNVCLNIL 443
P + Y G + + YP + P + ++HPNID G VCL+++
Sbjct: 42 PKDTAYENGVWRIRVDMPDKYPFKSPSIGFLNKIFHPNIDEASGTVCLDVI 92
>U13644-3|AAB52677.1| 230|Caenorhabditis elegans Ubiquitin e2
(conjugating enzyme)variant protein 2 protein.
Length = 230
Score = 34.3 bits (75), Expect = 0.12
Identities = 15/45 (33%), Positives = 27/45 (60%)
Frame = +3
Query: 309 YRGGKFVFSFKVGPNYPHEPPKVKCETAVYHPNIDLEGNVCLNIL 443
+ GG++ S +P PP + +T ++HPN+DL G++ L +L
Sbjct: 83 WEGGEYEVSVNFH-KWPIIPPICEFKTPLHHPNVDLRGSIYLKML 126
>Z81516-5|CAB04202.1| 219|Caenorhabditis elegans Hypothetical
protein F26H9.7 protein.
Length = 219
Score = 31.9 bits (69), Expect = 0.65
Identities = 18/54 (33%), Positives = 24/54 (44%), Gaps = 1/54 (1%)
Frame = +3
Query: 267 LLNFKLIICPDEGFYRGGKFVFSFKVGPNYPHEP-PKVKCETAVYHPNIDLEGN 425
LL +I P Y GG F + P H P+V T ++HPN+ GN
Sbjct: 62 LLFHVIIDGPVGSIYEGGTFFADINIQPYQNHSLIPRVCFHTFIFHPNLGKYGN 115
>Z92834-2|CAB07383.1| 139|Caenorhabditis elegans Hypothetical
protein F39B2.2 protein.
Length = 139
Score = 29.9 bits (64), Expect = 2.6
Identities = 15/48 (31%), Positives = 21/48 (43%)
Frame = +3
Query: 285 IICPDEGFYRGGKFVFSFKVGPNYPHEPPKVKCETAVYHPNIDLEGNV 428
II P Y + + G NYP EPP V+ T V+ ++ V
Sbjct: 45 IIGPPRTPYESRIYNLQIQCGGNYPREPPTVRFTTKVHMVGVNQSNGV 92
>Z81040-3|CAB02783.3| 444|Caenorhabditis elegans Hypothetical
protein C26E1.3 protein.
Length = 444
Score = 29.9 bits (64), Expect = 2.6
Identities = 28/88 (31%), Positives = 42/88 (47%), Gaps = 3/88 (3%)
Frame = +3
Query: 402 PNIDLEGNVCLNIL---RXRLETCSHSKLHSVRSPXIYSWNQTLKIPSTRKQRTSSKATG 572
PNI LE +C N+L R + T + LH V + + T+ +PST +S+ +
Sbjct: 17 PNI-LE--LCKNMLFASRHKECTTASELLHKVVALKCIQNHHTMSVPSTSHPASSTPSLA 73
Query: 573 DFSNNTFRELCEAATSAHLISNDASNEN 656
S N F A+ SA L N +NE+
Sbjct: 74 TASQN-FSSHLPASYSADLFENIENNEH 100
>Z47808-7|CAA87771.2| 934|Caenorhabditis elegans Hypothetical
protein D2013.5 protein.
Length = 934
Score = 29.5 bits (63), Expect = 3.5
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +2
Query: 98 MIKLFSLKQQKEDEEGSTRGGG 163
M K KQQKED+ G++ GGG
Sbjct: 151 MAKFEQFKQQKEDQNGNSGGGG 172
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,290,576
Number of Sequences: 27780
Number of extensions: 299370
Number of successful extensions: 848
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 804
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 846
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2307803960
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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