Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP16_F_J02
         (934 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY122183-1|AAM52695.1| 1380|Drosophila melanogaster LD40412p pro...    30   5.2  
AE014297-4410|AAF56915.1| 1380|Drosophila melanogaster CG1911-PA...    30   5.2  

>AY122183-1|AAM52695.1| 1380|Drosophila melanogaster LD40412p
           protein.
          Length = 1380

 Score = 29.9 bits (64), Expect = 5.2
 Identities = 15/58 (25%), Positives = 30/58 (51%)
 Frame = +1

Query: 148 QCCMHSLKRDAPKEDNSLNTLAESAKKTIEELREKVESALAPETVKKNFGTMVDSFNE 321
           QC +  L      E++ +N L +   +TIE L  ++++    +T+ +  GT +  FN+
Sbjct: 182 QCPLEKLWSPPVAEEDFINLLCDPCYRTIELLPLRMDNKHVFDTIFQILGTSIKRFNQ 239


>AE014297-4410|AAF56915.1| 1380|Drosophila melanogaster CG1911-PA
           protein.
          Length = 1380

 Score = 29.9 bits (64), Expect = 5.2
 Identities = 15/58 (25%), Positives = 30/58 (51%)
 Frame = +1

Query: 148 QCCMHSLKRDAPKEDNSLNTLAESAKKTIEELREKVESALAPETVKKNFGTMVDSFNE 321
           QC +  L      E++ +N L +   +TIE L  ++++    +T+ +  GT +  FN+
Sbjct: 182 QCPLEKLWSPPVAEEDFINLLCDPCYRTIELLPLRMDNKHVFDTIFQILGTSIKRFNQ 239


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,080,712
Number of Sequences: 53049
Number of extensions: 457761
Number of successful extensions: 1047
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1023
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1047
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4607820675
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)