Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP16_F_I24
(908 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9; ... 97 5e-19
UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular organi... 75 2e-12
UniRef50_UPI00015C640B Cluster: hypothetical protein CKO_pCKO2p0... 73 1e-11
UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1; ... 71 4e-11
UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3; ... 64 5e-09
UniRef50_A6NX90 Cluster: Putative uncharacterized protein; n=1; ... 61 3e-08
UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE... 56 2e-06
UniRef50_P03845 Cluster: Putative uncharacterized protein 1; n=4... 53 1e-05
UniRef50_P03851 Cluster: Uncharacterized 9.4 kDa protein; n=11; ... 52 2e-05
UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1; ... 50 8e-05
UniRef50_P03087 Cluster: Capsid protein VP1; n=1927; Polyomaviru... 45 0.002
UniRef50_P03846 Cluster: Putative uncharacterized protein 1; n=2... 44 0.005
UniRef50_UPI00015C63F8 Cluster: hypothetical protein CKO_pCKO3p0... 43 0.009
UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4; Ma... 41 0.050
UniRef50_P03023 Cluster: Lactose operon repressor; n=24; Enterob... 40 0.088
UniRef50_A7BAA3 Cluster: Putative uncharacterized protein; n=1; ... 36 1.9
UniRef50_Q69102 Cluster: HSV-2 specific ORF; n=1; Human herpesvi... 35 2.5
UniRef50_A6DNS7 Cluster: Probable ECF sigma factor; n=1; Lentisp... 34 5.8
UniRef50_A2SSD8 Cluster: Putative uncharacterized protein; n=1; ... 34 5.8
UniRef50_Q8GUF1 Cluster: Reverse transcriptase; n=1; Cicer ariet... 33 7.6
UniRef50_Q1JTI4 Cluster: Methyltransferase, putative; n=2; cellu... 33 7.6
>UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9;
root|Rep: Putative uncharacterized protein - Salmonella
typhimurium
Length = 127
Score = 97.1 bits (231), Expect = 5e-19
Identities = 55/90 (61%), Positives = 59/90 (65%), Gaps = 6/90 (6%)
Frame = +1
Query: 541 PWTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRPXPLTGYLSAF--LPSGSVAL 714
P TSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRP L F + +
Sbjct: 22 PLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRPCRLPDTCPPFSLREAWRFLI 81
Query: 715 SH----SSRCRYLSSGVGRSXPSWAVCTNP 792
+H S RCR + PSWAVCTNP
Sbjct: 82 AHAVGISVRCRSFA-------PSWAVCTNP 104
Score = 69.3 bits (162), Expect = 1e-10
Identities = 32/60 (53%), Positives = 34/60 (56%)
Frame = +2
Query: 623 PWKLPRALSCSDPXRLPDTCPPFSLREAWRFLIAHAVGISXXXXXXXXQAGLCARTPVQP 802
P + P P RLPDTCPPFSLREAWRFLIAHAVGIS +C P P
Sbjct: 49 PLEAPSCALLFRPCRLPDTCPPFSLREAWRFLIAHAVGISVRCRSFAPSWAVCTNPPFSP 108
Score = 57.2 bits (132), Expect = 5e-07
Identities = 47/125 (37%), Positives = 56/125 (44%), Gaps = 5/125 (4%)
Frame = +3
Query: 480 SKRPGTVKRPRCWRFSIGSAPLDEHHK---NRRSSQRWRNPTGL*RYQAFPPGSSLVRSP 650
SK+ T R RFSIGSAPL K R + ++ R+ P +L+ P
Sbjct: 2 SKKQSTGTSQRRCRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRP 61
Query: 651 VPTLXAYRIPVRLSPFGKRGAFS*LTL*VSQFG--CRSFASKLGCVHEPPFSPTAAPYPV 824
R+P PF R A+ L CRSFA PPFSPTAAPYPV
Sbjct: 62 C------RLPDTCPPFSLREAWRFLIAHAVGISVRCRSFAPSWAVCTNPPFSPTAAPYPV 115
Query: 825 XIVLS 839
IVLS
Sbjct: 116 TIVLS 120
>UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular
organisms|Rep: Predicted protein - Nematostella
vectensis
Length = 97
Score = 75.4 bits (177), Expect = 2e-12
Identities = 34/40 (85%), Positives = 35/40 (87%)
Frame = +1
Query: 541 PWTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRP 660
P TSITK DAQ+ GGETRQDYKDTRRFPL APSCALLF P
Sbjct: 58 PLTSITKSDAQISGGETRQDYKDTRRFPLAAPSCALLFLP 97
>UniRef50_UPI00015C640B Cluster: hypothetical protein
CKO_pCKO2p07168; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO2p07168 -
Citrobacter koseri ATCC BAA-895
Length = 99
Score = 72.5 bits (170), Expect = 1e-11
Identities = 42/95 (44%), Positives = 50/95 (52%)
Frame = -1
Query: 857 RXLPGXTQDDXYRIRRSGRAERGFVHTAQLGXERPTPELRYLQREL*ESATLPEGRKADR 678
R PG TQDD YR RS RAERG + ERP P ++ P+G+KA++
Sbjct: 5 RVRPGWTQDDSYRKGRSSRAERGVRAYSPAWSERPKPSRDTSSVSYEKAPRFPKGKKAEQ 64
Query: 677 YPVSGQGRNRRAHEGASRGKRLVSL*SCRVSPPLT 573
QGRNRRAHEGA+ K SL PPLT
Sbjct: 65 VSGKRQGRNRRAHEGAAGEKSPASLSPVGFRPPLT 99
>UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1;
Escherichia coli|Rep: Putative uncharacterized protein -
Escherichia coli
Length = 147
Score = 70.9 bits (166), Expect = 4e-11
Identities = 33/43 (76%), Positives = 34/43 (79%)
Frame = +1
Query: 541 PWTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRPXPL 669
P TSI K DAQ+ GGETRQDYKD RRFPL APSCALLF P L
Sbjct: 90 PLTSIAKSDAQISGGETRQDYKDPRRFPLVAPSCALLFLPFGL 132
Score = 52.8 bits (121), Expect = 1e-05
Identities = 23/33 (69%), Positives = 26/33 (78%)
Frame = +2
Query: 311 RGEAVCVLGALPLPRSLTRCARSFGCGERYQLT 409
R +C G +PLPRSLTR ARSFGCGERY+LT
Sbjct: 26 RVSRICDTGDIPLPRSLTRYARSFGCGERYRLT 58
>UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3;
root|Rep: Putative uncharacterized protein - Escherichia
coli
Length = 61
Score = 64.1 bits (149), Expect = 5e-09
Identities = 38/57 (66%), Positives = 39/57 (68%)
Frame = -2
Query: 544 RGAEPMEKRQQRGLFTVPGLLLAFCSHVLSCVIPLILWITVLPPLSELIPLAAAERP 374
RGAEPMEKR + L V LL CS L PLILWITVLPPLSEL PLAA ERP
Sbjct: 4 RGAEPMEKRLRCWLLPVLCFLLT-CSFRL---YPLILWITVLPPLSELTPLAAVERP 56
>UniRef50_A6NX90 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 37
Score = 61.3 bits (142), Expect = 3e-08
Identities = 28/28 (100%), Positives = 28/28 (100%)
Frame = +1
Query: 664 PLTGYLSAFLPSGSVALSHSSRCRYLSS 747
PLTGYLSAFLPSGSVALSHSSRCRYLSS
Sbjct: 9 PLTGYLSAFLPSGSVALSHSSRCRYLSS 36
>UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE -
Myxococcus xanthus
Length = 486
Score = 55.6 bits (128), Expect = 2e-06
Identities = 31/54 (57%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
Frame = +2
Query: 287 CINESANARGEAVCVLGALPLPRSLTRCARSFGCGERYQL-TQRR*YGYPQNQG 445
CI + A AR EAV VL ALPL RS TRC RS GCG + R YG PQ QG
Sbjct: 266 CIRDPATARSEAVWVLVALPLLRSRTRCVRSVGCGGAVSAHSPGRPYGDPQPQG 319
>UniRef50_P03845 Cluster: Putative uncharacterized protein 1; n=4;
Bacteria|Rep: Putative uncharacterized protein 1 -
Escherichia coli
Length = 42
Score = 52.8 bits (121), Expect = 1e-05
Identities = 25/41 (60%), Positives = 28/41 (68%)
Frame = -1
Query: 869 VGISRXLPGXTQDDXYRIRRSGRAERGFVHTAQLGXERPTP 747
+ + R LPG TQDD YRIRRSGRAERG + ERPTP
Sbjct: 1 MALRRALPGWTQDDSYRIRRSGRAERGVRAHSPAWSERPTP 41
>UniRef50_P03851 Cluster: Uncharacterized 9.4 kDa protein; n=11;
cellular organisms|Rep: Uncharacterized 9.4 kDa protein
- Escherichia coli
Length = 84
Score = 52.4 bits (120), Expect = 2e-05
Identities = 24/29 (82%), Positives = 25/29 (86%)
Frame = +2
Query: 791 PVQPDRCALSGXYRLESXRVKXDLSPLAA 877
PVQPDRCALSG YRLES V+ DLSPLAA
Sbjct: 5 PVQPDRCALSGNYRLESNPVRHDLSPLAA 33
>UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1;
Beggiatoa sp. SS|Rep: Putative uncharacterized protein -
Beggiatoa sp. SS
Length = 114
Score = 50.0 bits (114), Expect = 8e-05
Identities = 23/50 (46%), Positives = 34/50 (68%)
Frame = +1
Query: 511 VAGVFP*APPPWTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRP 660
++ +FP PP T+ITKI Q + +T+ +YK T FPL++PS +LLF P
Sbjct: 65 LSSLFPYNSPPLTTITKIYPQFKNTQTQHNYKYTTPFPLQSPSYSLLFPP 114
>UniRef50_P03087 Cluster: Capsid protein VP1; n=1927;
Polyomavirus|Rep: Capsid protein VP1 - Simian virus 40
(SV40)
Length = 364
Score = 45.2 bits (102), Expect = 0.002
Identities = 19/19 (100%), Positives = 19/19 (100%)
Frame = +3
Query: 90 DPDMIRYIDEFGQTTTRMQ 146
DPDMIRYIDEFGQTTTRMQ
Sbjct: 346 DPDMIRYIDEFGQTTTRMQ 364
>UniRef50_P03846 Cluster: Putative uncharacterized protein 1; n=2;
cellular organisms|Rep: Putative uncharacterized protein
1 - Escherichia coli
Length = 47
Score = 44.0 bits (99), Expect = 0.005
Identities = 21/37 (56%), Positives = 24/37 (64%)
Frame = -1
Query: 857 RXLPGXTQDDXYRIRRSGRAERGFVHTAQLGXERPTP 747
R PG TQ + YRIRRS RAERG + + ERPTP
Sbjct: 5 RAFPGWTQVNSYRIRRSSRAERGVLAYSPAWSERPTP 41
>UniRef50_UPI00015C63F8 Cluster: hypothetical protein
CKO_pCKO3p06146; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO3p06146 -
Citrobacter koseri ATCC BAA-895
Length = 125
Score = 43.2 bits (97), Expect = 0.009
Identities = 19/30 (63%), Positives = 20/30 (66%)
Frame = +3
Query: 750 CRSFASKLGCVHEPPFSPTAAPYPVXIVLS 839
CRSFA PPFSPTAAPYPV + LS
Sbjct: 81 CRSFAPSWAVSKNPPFSPTAAPYPVTVHLS 110
Score = 40.7 bits (91), Expect = 0.050
Identities = 29/73 (39%), Positives = 33/73 (45%)
Frame = +1
Query: 574 VRGGETRQDYKDTRRFPLEAPSCALLFRPXPLTGYLSAFLPSGSVALSHSSRCRYLSSGV 753
VR GETRQD K P P + F +GSVALSHSS +S+
Sbjct: 23 VRSGETRQDLKIITVSDESLPLALSCSNPAVSRIPVPPFSLAGSVALSHSSHSG-ISARC 81
Query: 754 GRSXPSWAVCTNP 792
PSWAV NP
Sbjct: 82 RSFAPSWAVSKNP 94
>UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4;
Magnoliophyta|Rep: Putative reverse transcriptase -
Zingiber officinale (Ginger)
Length = 49
Score = 40.7 bits (91), Expect = 0.050
Identities = 16/17 (94%), Positives = 17/17 (100%)
Frame = +3
Query: 285 SALMNRPTRGERRFAYW 335
+ALMNRPTRGERRFAYW
Sbjct: 25 AALMNRPTRGERRFAYW 41
>UniRef50_P03023 Cluster: Lactose operon repressor; n=24;
Enterobacteriaceae|Rep: Lactose operon repressor -
Escherichia coli (strain K12)
Length = 360
Score = 39.9 bits (89), Expect = 0.088
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = -3
Query: 357 ERGSGRAPNTQTASPRALADSLMQ 286
+R + APNTQTASPRALADSLMQ
Sbjct: 325 KRKTTLAPNTQTASPRALADSLMQ 348
>UniRef50_A7BAA3 Cluster: Putative uncharacterized protein; n=1;
Actinomyces odontolyticus ATCC 17982|Rep: Putative
uncharacterized protein - Actinomyces odontolyticus ATCC
17982
Length = 2443
Score = 35.5 bits (78), Expect = 1.9
Identities = 25/76 (32%), Positives = 32/76 (42%), Gaps = 1/76 (1%)
Frame = -1
Query: 653 NRRAHEGASRGKRLVSL*SCRVSPPLT*ASIFVMLVQGGGAYGKTPATRPF-YGSWPFAG 477
N A+ G G V L + +V PL + FV GGG Y T + Y SW +
Sbjct: 291 NGSAYNGNQNGIGFVELQNIKVVDPLPEGAEFVSAT-GGGVYDSVTRTVTWSYDSWSWQN 349
Query: 476 LLLTCSFLRYPPDSVD 429
+ LRYP S D
Sbjct: 350 PIQNTVVLRYPQGSYD 365
>UniRef50_Q69102 Cluster: HSV-2 specific ORF; n=1; Human herpesvirus
2|Rep: HSV-2 specific ORF - Human herpesvirus 2 (HHV-2)
(Human herpes simplex virus 2)
Length = 552
Score = 35.1 bits (77), Expect = 2.5
Identities = 22/64 (34%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Frame = -1
Query: 788 FVHTAQLGXERPTPELRYLQRE-L*ESATLPEGRKADRYPVSGQ-GRNRRAHEGASRGKR 615
F+H L + P P L ++QR+ L +LP+ A + P+SG GR RR + +R
Sbjct: 84 FIHNTNLSFDPPPPPLEHIQRQVLFLRWSLPKRIVAVKRPLSGDAGRPRRRRRQTAERRR 143
Query: 614 LVSL 603
+V L
Sbjct: 144 VVIL 147
>UniRef50_A6DNS7 Cluster: Probable ECF sigma factor; n=1;
Lentisphaera araneosa HTCC2155|Rep: Probable ECF sigma
factor - Lentisphaera araneosa HTCC2155
Length = 201
Score = 33.9 bits (74), Expect = 5.8
Identities = 17/56 (30%), Positives = 28/56 (50%)
Frame = +3
Query: 168 EICDAIALFVTIISCNKQVNNNNCIHFMFQVQGEVWEVFSALMNRPTRGERRFAYW 335
+ DA F+ I N +N+++C + +V +VWE + P RG +F YW
Sbjct: 32 DFSDAYRRFIYIALRNNGLNHHDCEEVVQRVMIKVWEKIARFKYNPGRG--KFRYW 85
>UniRef50_A2SSD8 Cluster: Putative uncharacterized protein; n=1;
Methanocorpusculum labreanum Z|Rep: Putative
uncharacterized protein - Methanocorpusculum labreanum
(strain ATCC 43576 / DSM 4855 / Z)
Length = 109
Score = 33.9 bits (74), Expect = 5.8
Identities = 21/55 (38%), Positives = 28/55 (50%)
Frame = -1
Query: 248 KMNAIVVVNLFIAAYNGYK*SNSITNFTNKAFFSLHSSCGLSKLINVSYHVWIQL 84
+MNA V + FIAA + +T + AFF L S G ++VSY VW L
Sbjct: 27 RMNAWVDLAAFIAAV-----ATCVTGYVLWAFFPLGSGRGAMNFLDVSYQVWYDL 76
>UniRef50_Q8GUF1 Cluster: Reverse transcriptase; n=1; Cicer
arietinum|Rep: Reverse transcriptase - Cicer arietinum
(Chickpea) (Garbanzo)
Length = 37
Score = 33.5 bits (73), Expect = 7.6
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = +3
Query: 420 NTVIHRIRGITQERTCE 470
NTVIH +GITQERTCE
Sbjct: 21 NTVIHXNQGITQERTCE 37
>UniRef50_Q1JTI4 Cluster: Methyltransferase, putative; n=2; cellular
organisms|Rep: Methyltransferase, putative - Toxoplasma
gondii RH
Length = 541
Score = 33.5 bits (73), Expect = 7.6
Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = -3
Query: 774 PAWXRTTYTRTEIPTA*A-MRKRHASRREKGGQVSGKRXGSEQESARGSFQGETP 613
P W ++ E+ T A R + A+ R + G GKR G+E E G+ G+TP
Sbjct: 348 PVWP-IVHSHQEVETQLAKQRLQEATERTQLGGFDGKRTGAESERGYGADSGDTP 401
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 852,461,082
Number of Sequences: 1657284
Number of extensions: 17714339
Number of successful extensions: 47620
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 45328
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 47572
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 82801539422
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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