Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP16_F_I24
         (908 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_06_0323 - 22337217-22337450,22338263-22339204                       31   1.7  
01_01_1008 - 7987936-7988628,7988923-7989102                           31   1.7  
08_02_1006 - 23484861-23485409,23486327-23486488,23486584-23487165     30   2.9  
12_02_0082 - 13372997-13373863,13373928-13374386                       29   6.7  
01_01_1201 + 9678893-9679311,9679415-9679721                           29   6.7  
11_06_0012 + 19251085-19251666                                         28   8.9  
10_08_0940 - 21708557-21708733,21709058-21709142,21709330-217095...    28   8.9  
07_03_0697 + 20759176-20759817,20760592-20760708,20761422-207616...    28   8.9  

>09_06_0323 - 22337217-22337450,22338263-22339204
          Length = 391

 Score = 30.7 bits (66), Expect = 1.7
 Identities = 20/57 (35%), Positives = 30/57 (52%)
 Frame = +1

Query: 580 GGETRQDYKDTRRFPLEAPSCALLFRPXPLTGYLSAFLPSGSVALSHSSRCRYLSSG 750
           GGE  ++    RRF   AP  ALL R   L    ++     + A++HS+RCR+ + G
Sbjct: 166 GGEAAREL--ARRFAA-APRRALLSRREQLRAAPASPAAMAAAAVAHSTRCRFRADG 219


>01_01_1008 - 7987936-7988628,7988923-7989102
          Length = 290

 Score = 30.7 bits (66), Expect = 1.7
 Identities = 13/36 (36%), Positives = 20/36 (55%)
 Frame = -3

Query: 717 RKRHASRREKGGQVSGKRXGSEQESARGSFQGETPG 610
           R R   RR  GG+V+G+     +   RG+++GE  G
Sbjct: 239 RVRRRGRRGGGGEVNGEEAARSRRRRRGAWEGEEEG 274


>08_02_1006 - 23484861-23485409,23486327-23486488,23486584-23487165
          Length = 430

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 16/40 (40%), Positives = 22/40 (55%)
 Frame = -1

Query: 629 SRGKRLVSL*SCRVSPPLT*ASIFVMLVQGGGAYGKTPAT 510
           SRGK L+S  + R  PP   + + V+ + GGG  G  P T
Sbjct: 25  SRGKSLLSPSTPRSPPPSYGSIVTVLSIDGGGVRGIIPGT 64


>12_02_0082 - 13372997-13373863,13373928-13374386
          Length = 441

 Score = 28.7 bits (61), Expect = 6.7
 Identities = 13/21 (61%), Positives = 13/21 (61%)
 Frame = +1

Query: 637 SCALLFRPXPLTGYLSAFLPS 699
           SCALLF P PL G     LPS
Sbjct: 164 SCALLFSPMPLDGPTLGLLPS 184


>01_01_1201 + 9678893-9679311,9679415-9679721
          Length = 241

 Score = 28.7 bits (61), Expect = 6.7
 Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 3/49 (6%)
 Frame = -3

Query: 747 RTEIPTA*AMRKRHASRREKGGQVSGKRXGSEQESAR---GSFQGETPG 610
           R E     A  + HA+RR++ G   G   G+ QESAR   G+ + + PG
Sbjct: 11  RAEAAAHRAADELHAARRDEPGGGGGGMLGTVQESARSLLGAVRDKIPG 59


>11_06_0012 + 19251085-19251666
          Length = 193

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 14/32 (43%), Positives = 17/32 (53%)
 Frame = -3

Query: 762 RTTYTRTEIPTA*AMRKRHASRREKGGQVSGK 667
           RTT T  E   A   R+RH  RR+ GG   G+
Sbjct: 69  RTTATAVEAQQA-LRRRRHGGRRDSGGGAGGR 99


>10_08_0940 -
           21708557-21708733,21709058-21709142,21709330-21709551,
           21710640-21710815,21711883-21711946,21712433-21712507,
           21715114-21715199,21715297-21716715
          Length = 767

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
 Frame = +2

Query: 293 NESAN---ARGEAVCVLGALPLPRSLTRCAR 376
           +ESAN   AR EAV  +G +P+   L RC+R
Sbjct: 434 DESANVDAARSEAVMRVGGIPMLLDLARCSR 464


>07_03_0697 +
           20759176-20759817,20760592-20760708,20761422-20761696,
           20761906-20762068,20762293-20762421,20762989-20763713,
           20763853-20764081
          Length = 759

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 12/25 (48%), Positives = 15/25 (60%)
 Frame = +3

Query: 519 RFSIGSAPLDEHHKNRRSSQRWRNP 593
           RFS  SAP+D+H + RR      NP
Sbjct: 132 RFSSSSAPVDKHGRRRRKKGGRENP 156


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,074,111
Number of Sequences: 37544
Number of extensions: 538774
Number of successful extensions: 1567
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1521
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1567
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2577242800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)