Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP16_F_I23
         (931 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_08_0343 - 16960764-16960895,16961166-16961171,16961272-169616...    31   1.7  
09_01_0111 + 1727021-1727206,1727324-1727373,1727440-1727491,172...    30   2.3  
03_01_0515 - 3864796-3865425                                           30   2.3  
01_07_0239 + 42222024-42222133,42222220-42222301,42222396-422224...    29   5.3  
12_02_0299 - 17051570-17052474,17053542-17053755                       28   9.2  
01_02_0007 + 10132380-10133201                                         28   9.2  

>10_08_0343 -
           16960764-16960895,16961166-16961171,16961272-16961640,
           16962118-16962304,16962567-16962759,16962864-16963137,
           16963215-16963374,16963985-16964199,16964784-16964876,
           16965192-16965260,16965293-16965445,16965534-16965737,
           16966416-16966691,16967336-16967431,16967585-16967788,
           16967877-16968069,16968229-16968374,16968771-16969425,
           16971462-16971774,16971989-16972139,16972602-16973815,
           16973933-16974182,16974784-16975035
          Length = 1934

 Score = 30.7 bits (66), Expect = 1.7
 Identities = 17/36 (47%), Positives = 18/36 (50%)
 Frame = -2

Query: 897 GKGXPXPQRGKXRXXXXGXGQGXGTGXGXRGXFXRG 790
           G G P  QRG+ R    G G G G G G RG   RG
Sbjct: 858 GGGGPNSQRGRGR---GGGGAGRGGGGGGRGGGGRG 890


>09_01_0111 +
           1727021-1727206,1727324-1727373,1727440-1727491,
           1727553-1727598,1727671-1727690,1727897-1727983,
           1729290-1729466,1729542-1729565,1729639-1729725,
           1729799-1729870,1730622-1732496
          Length = 891

 Score = 30.3 bits (65), Expect = 2.3
 Identities = 19/62 (30%), Positives = 26/62 (41%), Gaps = 1/62 (1%)
 Frame = +3

Query: 381 NNNNCI-HFMFQVQGEVWEVFSGXNESAXARGEAVCXLGALPVXRSLTRCXRSFGCGXRY 557
           NN  CI H    +Q  VW        S   R E  C L A+   +S   C  S+ CG ++
Sbjct: 449 NNLGCILHQQRSIQTSVWCFSKALKYSLSLRSEKPCKLTAISQDKS---CLISYNCGIQH 505

Query: 558 XL 563
            +
Sbjct: 506 LM 507


>03_01_0515 - 3864796-3865425
          Length = 209

 Score = 30.3 bits (65), Expect = 2.3
 Identities = 15/45 (33%), Positives = 15/45 (33%)
 Frame = +1

Query: 790 PPXKXPXXPXPCSXPLXXXGXPXPPFSPLGXGXALSQXPPXXGXP 924
           PP   P  P P   P      P PP  P     A S  PP    P
Sbjct: 63  PPAAGPLMPPPPPPPSVTSSPPPPPLPPPPPPPAASPPPPPPSPP 107


>01_07_0239 +
           42222024-42222133,42222220-42222301,42222396-42222486,
           42222702-42222814,42222912-42222984,42223080-42223178,
           42223201-42223406,42223693-42223832,42223912-42223969,
           42224067-42224137,42224207-42224741
          Length = 525

 Score = 29.1 bits (62), Expect = 5.3
 Identities = 13/32 (40%), Positives = 14/32 (43%)
 Frame = -3

Query: 884 PFPKGEXGGXGXPXXXKGXEQGXGXXGXXQGG 789
           P+P G  GG G P    G   G G     QGG
Sbjct: 466 PYPGGGMGGAGGPRGGGGSGYGVGGPNYQQGG 497


>12_02_0299 - 17051570-17052474,17053542-17053755
          Length = 372

 Score = 28.3 bits (60), Expect = 9.2
 Identities = 17/46 (36%), Positives = 18/46 (39%), Gaps = 2/46 (4%)
 Frame = +2

Query: 779 PXVXPLXXX-PRXPXPVPXPXPXPXXXXRXF-PLWGXGXPFPKXPP 910
           P   PL    P  P P P P P P      F PL     P+P  PP
Sbjct: 308 PHFPPLPSFYPSPPPPPPPPPPPPPSFPWPFPPLAPLFPPYPSPPP 353


>01_02_0007 + 10132380-10133201
          Length = 273

 Score = 28.3 bits (60), Expect = 9.2
 Identities = 15/46 (32%), Positives = 19/46 (41%)
 Frame = +2

Query: 776 SPXVXPLXXXPRXPXPVPXPXPXPXXXXRXFPLWGXGXPFPKXPPR 913
           +P   PL      P P P P P P    +  PL G   P P+  P+
Sbjct: 67  NPQPQPLPQPQPQPQPQPQPLPQPQPQPQPLPLPGP-QPLPQPGPQ 111


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,978,699
Number of Sequences: 37544
Number of extensions: 236562
Number of successful extensions: 1034
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 611
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 856
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2659245980
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)