Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP16_F_I20
         (922 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z11692-1|CAA77750.1|  858|Homo sapiens human  elongation factor ...    56   1e-07
X51466-1|CAA35829.1|  858|Homo sapiens elongation factor 2 protein.    56   1e-07
BC126259-1|AAI26260.1|  858|Homo sapiens EEF2 protein protein.         56   1e-07
BC006547-1|AAH06547.1|  583|Homo sapiens EEF2 protein protein.         56   1e-07
AY942181-1|AAX34409.1|  858|Homo sapiens elongation factor 2 pro...    56   1e-07
AK023282-1|BAB14507.1|  669|Homo sapiens protein ( Homo sapiens ...    35   0.36 
BC036768-1|AAH36768.1|  669|Homo sapiens GUF1 GTPase homolog (S....    33   1.5  

>Z11692-1|CAA77750.1|  858|Homo sapiens human  elongation factor 2
           protein.
          Length = 858

 Score = 56.4 bits (130), Expect = 1e-07
 Identities = 26/37 (70%), Positives = 29/37 (78%)
 Frame = +1

Query: 148 IDEIRGMMDKXRNXRXMSVIAHVXHGKSTLTDSXVXK 258
           +D+IR +MDK  N R MSVIAHV HGKSTLTDS V K
Sbjct: 6   VDQIRAIMDKKANIRNMSVIAHVDHGKSTLTDSLVCK 42



 Score = 31.1 bits (67), Expect = 5.9
 Identities = 14/25 (56%), Positives = 17/25 (68%)
 Frame = +2

Query: 257 RXGIXAGARAXXTRVTXSRKDEHDR 331
           + GI A ARA  TR T +RKDE +R
Sbjct: 42  KAGIIASARAGETRFTDTRKDEQER 66


>X51466-1|CAA35829.1|  858|Homo sapiens elongation factor 2 protein.
          Length = 858

 Score = 56.4 bits (130), Expect = 1e-07
 Identities = 26/37 (70%), Positives = 29/37 (78%)
 Frame = +1

Query: 148 IDEIRGMMDKXRNXRXMSVIAHVXHGKSTLTDSXVXK 258
           +D+IR +MDK  N R MSVIAHV HGKSTLTDS V K
Sbjct: 6   VDQIRAIMDKKANIRNMSVIAHVDHGKSTLTDSLVCK 42



 Score = 31.1 bits (67), Expect = 5.9
 Identities = 14/25 (56%), Positives = 17/25 (68%)
 Frame = +2

Query: 257 RXGIXAGARAXXTRVTXSRKDEHDR 331
           + GI A ARA  TR T +RKDE +R
Sbjct: 42  KAGIIASARAGETRFTDTRKDEQER 66


>BC126259-1|AAI26260.1|  858|Homo sapiens EEF2 protein protein.
          Length = 858

 Score = 56.4 bits (130), Expect = 1e-07
 Identities = 26/37 (70%), Positives = 29/37 (78%)
 Frame = +1

Query: 148 IDEIRGMMDKXRNXRXMSVIAHVXHGKSTLTDSXVXK 258
           +D+IR +MDK  N R MSVIAHV HGKSTLTDS V K
Sbjct: 6   VDQIRAIMDKKANIRNMSVIAHVDHGKSTLTDSLVCK 42



 Score = 31.1 bits (67), Expect = 5.9
 Identities = 14/25 (56%), Positives = 17/25 (68%)
 Frame = +2

Query: 257 RXGIXAGARAXXTRVTXSRKDEHDR 331
           + GI A ARA  TR T +RKDE +R
Sbjct: 42  KAGIIASARAGETRFTDTRKDEQER 66


>BC006547-1|AAH06547.1|  583|Homo sapiens EEF2 protein protein.
          Length = 583

 Score = 56.4 bits (130), Expect = 1e-07
 Identities = 26/37 (70%), Positives = 29/37 (78%)
 Frame = +1

Query: 148 IDEIRGMMDKXRNXRXMSVIAHVXHGKSTLTDSXVXK 258
           +D+IR +MDK  N R MSVIAHV HGKSTLTDS V K
Sbjct: 6   VDQIRAIMDKKANIRNMSVIAHVDHGKSTLTDSLVCK 42



 Score = 31.1 bits (67), Expect = 5.9
 Identities = 14/25 (56%), Positives = 17/25 (68%)
 Frame = +2

Query: 257 RXGIXAGARAXXTRVTXSRKDEHDR 331
           + GI A ARA  TR T +RKDE +R
Sbjct: 42  KAGIIASARAGETRFTDTRKDEQER 66


>AY942181-1|AAX34409.1|  858|Homo sapiens elongation factor 2
           protein.
          Length = 858

 Score = 56.4 bits (130), Expect = 1e-07
 Identities = 26/37 (70%), Positives = 29/37 (78%)
 Frame = +1

Query: 148 IDEIRGMMDKXRNXRXMSVIAHVXHGKSTLTDSXVXK 258
           +D+IR +MDK  N R MSVIAHV HGKSTLTDS V K
Sbjct: 6   VDQIRAIMDKKANIRNMSVIAHVDHGKSTLTDSLVCK 42



 Score = 31.1 bits (67), Expect = 5.9
 Identities = 14/25 (56%), Positives = 17/25 (68%)
 Frame = +2

Query: 257 RXGIXAGARAXXTRVTXSRKDEHDR 331
           + GI A ARA  TR T +RKDE +R
Sbjct: 42  KAGIIASARAGETRFTDTRKDEQER 66


>AK023282-1|BAB14507.1|  669|Homo sapiens protein ( Homo sapiens
           cDNA FLJ13220 fis, clone NT2RP4002047, moderately
           similar to GTP-BINDING PROTEIN LEPA. ).
          Length = 669

 Score = 35.1 bits (77), Expect = 0.36
 Identities = 14/20 (70%), Positives = 16/20 (80%)
 Frame = +1

Query: 184 NXRXMSVIAHVXHGKSTLTD 243
           N R  S++AHV HGKSTLTD
Sbjct: 67  NIRNFSIVAHVDHGKSTLTD 86


>BC036768-1|AAH36768.1|  669|Homo sapiens GUF1 GTPase homolog (S.
           cerevisiae) protein.
          Length = 669

 Score = 33.1 bits (72), Expect = 1.5
 Identities = 13/20 (65%), Positives = 15/20 (75%)
 Frame = +1

Query: 184 NXRXMSVIAHVXHGKSTLTD 243
           N R  S++AHV HGKSTL D
Sbjct: 67  NIRNFSIVAHVDHGKSTLAD 86


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 71,343,977
Number of Sequences: 237096
Number of extensions: 929016
Number of successful extensions: 913
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 891
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 913
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11992411152
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)