Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP16_F_I19
         (868 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_01_0066 - 537729-538163                                             93   3e-19
10_07_0174 + 13815478-13815903                                         92   5e-19
02_04_0449 + 23010099-23010317,23010873-23010934,23011399-230114...    29   3.6  
07_03_1712 + 28932328-28932502,28932583-28932902,28933405-28933950     28   8.4  

>03_01_0066 - 537729-538163
          Length = 144

 Score = 92.7 bits (220), Expect = 3e-19
 Identities = 39/58 (67%), Positives = 52/58 (89%)
 Frame = +2

Query: 137 IEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQ 310
           IEKYY+R+TLDF TNK++ EE++I+P+K LRNK+AGF+THLMRR++   VRGIS+KLQ
Sbjct: 17  IEKYYSRMTLDFHTNKKVLEEVSILPSKRLRNKVAGFSTHLMRRIQRGPVRGISLKLQ 74



 Score = 33.1 bits (72), Expect = 0.30
 Identities = 18/40 (45%), Positives = 26/40 (65%)
 Frame = +3

Query: 336 NYVPEVSALEHDIIEVDPDTKDMLKMLDFNNINGLQLTQP 455
           ++VP+ SALE D I VD +T DML  L   ++ G+ + QP
Sbjct: 83  DFVPDRSALEVDDIRVDKETLDMLTSLGMADLPGV-VRQP 121


>10_07_0174 + 13815478-13815903
          Length = 141

 Score = 92.3 bits (219), Expect = 5e-19
 Identities = 39/58 (67%), Positives = 51/58 (87%)
 Frame = +2

Query: 137 IEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQ 310
           IEKYY+R+TLDF TNK++ EE++I+P+K LRNK+AGF THLMRR++   VRGIS+KLQ
Sbjct: 17  IEKYYSRMTLDFHTNKKVLEEVSILPSKRLRNKVAGFTTHLMRRIQRGPVRGISLKLQ 74



 Score = 33.1 bits (72), Expect = 0.30
 Identities = 16/39 (41%), Positives = 25/39 (64%)
 Frame = +3

Query: 336 NYVPEVSALEHDIIEVDPDTKDMLKMLDFNNINGLQLTQ 452
           ++VPE SALE + I VD +T +ML  L   ++ G++  Q
Sbjct: 83  DFVPEKSALEVEEIRVDKETMEMLAALGMADLPGVERQQ 121


>02_04_0449 +
           23010099-23010317,23010873-23010934,23011399-23011450,
           23011803-23011917,23012024-23012118,23012852-23012958,
           23013042-23013156,23014159-23014203,23014324-23014392
          Length = 292

 Score = 29.5 bits (63), Expect = 3.6
 Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 3/49 (6%)
 Frame = -1

Query: 493 INYACHHSHPWVA---GCVSCRPLILLKSSIFNISLVSGSTSMMSCSRA 356
           IN+   HS  W     GC +      +K+ +F+I LVS   S+++C  A
Sbjct: 132 INWLKSHSASWTVADFGCGNAAVSKNVKNKVFSIDLVSEDPSVIACDMA 180


>07_03_1712 + 28932328-28932502,28932583-28932902,28933405-28933950
          Length = 346

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = +1

Query: 241 WICHTFNEASQTLASARNLYQTSGKRSVRGVT 336
           WI H +  A+  LA+A N Y+ S     R V+
Sbjct: 132 WIMHEYRLAADPLAAAANTYKPSSSSRFRNVS 163


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,248,372
Number of Sequences: 37544
Number of extensions: 263852
Number of successful extensions: 587
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 578
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 586
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2432722788
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)