Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP16_F_I14
         (868 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_01_0263 + 2136858-2137331                                          191   7e-49
12_01_0323 - 2459854-2460306                                          190   2e-48
11_01_0317 - 2365493-2365786,2365825-2365953                          152   3e-37
06_03_1161 - 28089177-28089359,28089473-28089700,28089776-280898...    29   3.6  
08_02_1023 - 23710825-23710950,23711037-23711120,23711367-237114...    28   8.4  

>01_01_0263 + 2136858-2137331
          Length = 157

 Score =  191 bits (465), Expect = 7e-49
 Identities = 93/137 (67%), Positives = 116/137 (84%)
 Frame = +3

Query: 84  MKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRG 263
           MK N +VTSSRRK RK HF+APS +RRVLMS+ LS ELR K+NV+S+PIRKDDEVQVVRG
Sbjct: 1   MKRNPRVTSSRRKCRKAHFTAPSSVRRVLMSAALSSELRHKYNVRSIPIRKDDEVQVVRG 60

Query: 264 HYKGQQVGKVMQVYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVKLKMNKDRKAILD 443
            YKG++ GKV+QVYR+++V+++ERI REK NG+T  VGIHPSK V+ KLK++KDRKAILD
Sbjct: 61  SYKGRE-GKVVQVYRRRWVIHVERITREKVNGSTVNVGIHPSKVVVTKLKLDKDRKAILD 119

Query: 444 RRAKGRLAALGKDKGKY 494
           R+A+GR  A  K KGK+
Sbjct: 120 RKARGR--AADKAKGKF 134


>12_01_0323 - 2459854-2460306
          Length = 150

 Score =  190 bits (462), Expect = 2e-48
 Identities = 93/137 (67%), Positives = 115/137 (83%)
 Frame = +3

Query: 84  MKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRG 263
           MK N +VTSSRRK RK HF+APS +RRVLMS+ LS ELR K+NV+S+PIRKDDEVQVVRG
Sbjct: 1   MKRNPRVTSSRRKCRKAHFTAPSSVRRVLMSAALSTELRHKYNVRSIPIRKDDEVQVVRG 60

Query: 264 HYKGQQVGKVMQVYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVKLKMNKDRKAILD 443
            YKG++ GKV+QVYR+++V+++ERI REK NG+T  VGIHPSK V+ KLK++KDRKAILD
Sbjct: 61  SYKGRE-GKVVQVYRRRWVIHVERITREKVNGSTVNVGIHPSKVVVTKLKLDKDRKAILD 119

Query: 444 RRAKGRLAALGKDKGKY 494
           R+A GR  A  K KGK+
Sbjct: 120 RKASGR--AADKAKGKF 134


>11_01_0317 - 2365493-2365786,2365825-2365953
          Length = 140

 Score =  152 bits (369), Expect = 3e-37
 Identities = 82/137 (59%), Positives = 102/137 (74%)
 Frame = +3

Query: 84  MKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRG 263
           MK N +VTSSRRK RK HF+APS +RRVLMS+ LS ELR K+NV             VRG
Sbjct: 1   MKRNPRVTSSRRKCRKAHFTAPSSVRRVLMSAALSTELRHKYNV-------------VRG 47

Query: 264 HYKGQQVGKVMQVYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVKLKMNKDRKAILD 443
            YKG++ GKV+QVYR+++V+++ERI REK NG+T  VGIHPSK V+ KLK++KDRKAILD
Sbjct: 48  SYKGRE-GKVVQVYRRRWVIHVERITREKVNGSTVNVGIHPSKVVVTKLKLDKDRKAILD 106

Query: 444 RRAKGRLAALGKDKGKY 494
           R+A GR  A  K KGK+
Sbjct: 107 RKASGR--AADKAKGKF 121


>06_03_1161 -
           28089177-28089359,28089473-28089700,28089776-28089814,
           28090681-28090737,28090924-28091046
          Length = 209

 Score = 29.5 bits (63), Expect = 3.6
 Identities = 23/98 (23%), Positives = 48/98 (48%), Gaps = 6/98 (6%)
 Frame = +3

Query: 57  VSFLAKSDRMKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPI-- 230
           +S  A +   +F  + ++S++    ++F     I+   +   L +  R+K    S+P+  
Sbjct: 32  LSTFAAAPAGEFRLRTSTSQQPTLCQNFVVKFMIKTCPIQMRLKRWERKKCKPNSLPVLH 91

Query: 231 ----RKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIE 332
               R  D VQV+ G  KG +VG+V ++++    V ++
Sbjct: 92  KMHVRIGDTVQVIAGREKG-KVGEVTRLFKHNSTVIVK 128


>08_02_1023 -
           23710825-23710950,23711037-23711120,23711367-23711492,
           23711593-23711712,23712046-23712153,23712243-23712395,
           23712505-23712600,23712716-23712800,23713278-23714268,
           23714870-23714915,23715806-23715964,23716516-23716651,
           23716734-23716900,23717366-23717696,23717827-23718062,
           23718326-23718514
          Length = 1050

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 14/26 (53%), Positives = 18/26 (69%)
 Frame = +3

Query: 39  LFRFLAVSFLAKSDRMKFNKQVTSSR 116
           +FR L +   A+S+ MK NKQVT SR
Sbjct: 537 VFRQLHLEAEARSEEMKKNKQVTGSR 562


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,268,749
Number of Sequences: 37544
Number of extensions: 333463
Number of successful extensions: 776
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 753
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 773
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2432722788
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)