Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP16_F_I13
         (867 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY121648-1|AAM51975.1|  447|Drosophila melanogaster LD21713p pro...   123   3e-28
AE014297-3450|AAN13980.1|  447|Drosophila melanogaster CG5991-PC...   123   3e-28
AE014297-3449|AAN13979.1|  447|Drosophila melanogaster CG5991-PB...   123   3e-28
AE014297-3448|AAF56228.1|  447|Drosophila melanogaster CG5991-PA...   123   3e-28

>AY121648-1|AAM51975.1|  447|Drosophila melanogaster LD21713p
           protein.
          Length = 447

 Score =  123 bits (297), Expect = 3e-28
 Identities = 66/158 (41%), Positives = 93/158 (58%), Gaps = 8/158 (5%)
 Frame = +3

Query: 339 NNKTKWLNFRAIFTRWMPLGSVMY--VGWCYIRASIDYE-----VSKVEIKFYEMFPFRV 497
           N  ++W  F     RW P+G  ++  + W   +   + E      S+++ + Y   P R+
Sbjct: 91  NILSRWTGF---LLRWAPMGICVFGAIEWQLQKNRCEKEGKPRTASELQSRIYCSLPLRI 147

Query: 498 TSRLWGKMAACEIPVSLRSFVYGTYIRMFSVNLNDAAVTDLKYYKSLSAFFTRPLRDGAR 677
            SR WG +AAC +P SLR +VYG Y   F VNL++A   + ++Y SL+ FFTRPL++G R
Sbjct: 148 ISRCWGWLAACYLPPSLRPYVYGWYSNTFDVNLSEAMYPEYEHYNSLAEFFTRPLKEGVR 207

Query: 678 YI-SAAPCVSPCDGVVLNCGPADTDKIEQVKGVTYSLE 788
            I   AP VSP DG VL+ G A    IEQVKGV+YS+E
Sbjct: 208 VIDQQAPLVSPADGKVLHFGSASDSLIEQVKGVSYSIE 245


>AE014297-3450|AAN13980.1|  447|Drosophila melanogaster CG5991-PC,
           isoform C protein.
          Length = 447

 Score =  123 bits (297), Expect = 3e-28
 Identities = 66/158 (41%), Positives = 93/158 (58%), Gaps = 8/158 (5%)
 Frame = +3

Query: 339 NNKTKWLNFRAIFTRWMPLGSVMY--VGWCYIRASIDYE-----VSKVEIKFYEMFPFRV 497
           N  ++W  F     RW P+G  ++  + W   +   + E      S+++ + Y   P R+
Sbjct: 91  NILSRWTGF---LLRWAPMGICVFGAIEWQLQKNRCEKEGKPRTASELQSRIYCSLPLRI 147

Query: 498 TSRLWGKMAACEIPVSLRSFVYGTYIRMFSVNLNDAAVTDLKYYKSLSAFFTRPLRDGAR 677
            SR WG +AAC +P SLR +VYG Y   F VNL++A   + ++Y SL+ FFTRPL++G R
Sbjct: 148 ISRCWGWLAACYLPPSLRPYVYGWYSNTFDVNLSEAMYPEYEHYNSLAEFFTRPLKEGVR 207

Query: 678 YI-SAAPCVSPCDGVVLNCGPADTDKIEQVKGVTYSLE 788
            I   AP VSP DG VL+ G A    IEQVKGV+YS+E
Sbjct: 208 VIDQQAPLVSPADGKVLHFGSASDSLIEQVKGVSYSIE 245


>AE014297-3449|AAN13979.1|  447|Drosophila melanogaster CG5991-PB,
           isoform B protein.
          Length = 447

 Score =  123 bits (297), Expect = 3e-28
 Identities = 66/158 (41%), Positives = 93/158 (58%), Gaps = 8/158 (5%)
 Frame = +3

Query: 339 NNKTKWLNFRAIFTRWMPLGSVMY--VGWCYIRASIDYE-----VSKVEIKFYEMFPFRV 497
           N  ++W  F     RW P+G  ++  + W   +   + E      S+++ + Y   P R+
Sbjct: 91  NILSRWTGF---LLRWAPMGICVFGAIEWQLQKNRCEKEGKPRTASELQSRIYCSLPLRI 147

Query: 498 TSRLWGKMAACEIPVSLRSFVYGTYIRMFSVNLNDAAVTDLKYYKSLSAFFTRPLRDGAR 677
            SR WG +AAC +P SLR +VYG Y   F VNL++A   + ++Y SL+ FFTRPL++G R
Sbjct: 148 ISRCWGWLAACYLPPSLRPYVYGWYSNTFDVNLSEAMYPEYEHYNSLAEFFTRPLKEGVR 207

Query: 678 YI-SAAPCVSPCDGVVLNCGPADTDKIEQVKGVTYSLE 788
            I   AP VSP DG VL+ G A    IEQVKGV+YS+E
Sbjct: 208 VIDQQAPLVSPADGKVLHFGSASDSLIEQVKGVSYSIE 245


>AE014297-3448|AAF56228.1|  447|Drosophila melanogaster CG5991-PA,
           isoform A protein.
          Length = 447

 Score =  123 bits (297), Expect = 3e-28
 Identities = 66/158 (41%), Positives = 93/158 (58%), Gaps = 8/158 (5%)
 Frame = +3

Query: 339 NNKTKWLNFRAIFTRWMPLGSVMY--VGWCYIRASIDYE-----VSKVEIKFYEMFPFRV 497
           N  ++W  F     RW P+G  ++  + W   +   + E      S+++ + Y   P R+
Sbjct: 91  NILSRWTGF---LLRWAPMGICVFGAIEWQLQKNRCEKEGKPRTASELQSRIYCSLPLRI 147

Query: 498 TSRLWGKMAACEIPVSLRSFVYGTYIRMFSVNLNDAAVTDLKYYKSLSAFFTRPLRDGAR 677
            SR WG +AAC +P SLR +VYG Y   F VNL++A   + ++Y SL+ FFTRPL++G R
Sbjct: 148 ISRCWGWLAACYLPPSLRPYVYGWYSNTFDVNLSEAMYPEYEHYNSLAEFFTRPLKEGVR 207

Query: 678 YI-SAAPCVSPCDGVVLNCGPADTDKIEQVKGVTYSLE 788
            I   AP VSP DG VL+ G A    IEQVKGV+YS+E
Sbjct: 208 VIDQQAPLVSPADGKVLHFGSASDSLIEQVKGVSYSIE 245


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 36,368,310
Number of Sequences: 53049
Number of extensions: 792080
Number of successful extensions: 2257
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2166
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2253
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4188579408
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)