Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP16_F_I13
         (867 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ...    23   3.6  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             23   3.6  
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    23   4.8  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       22   6.4  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    22   6.4  
AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    22   8.4  
AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.     22   8.4  

>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
           protein.
          Length = 1124

 Score = 23.0 bits (47), Expect = 3.6
 Identities = 12/36 (33%), Positives = 18/36 (50%)
 Frame = +2

Query: 203 GAMFPPTRLRSCLPVMNQMYKPRLRPHRPFXTNEHN 310
           G ++PP       P    MYKP L P +   ++E+N
Sbjct: 842 GVIYPPV---IGTPSTGMMYKPFLIPEQTSISHENN 874


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 23.0 bits (47), Expect = 3.6
 Identities = 10/19 (52%), Positives = 11/19 (57%)
 Frame = -1

Query: 549  GGTPGFRRPPFSPTIDWSP 493
            GG P   RP   PT+D SP
Sbjct: 1361 GGRPVPERPERVPTVDLSP 1379


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 22.6 bits (46), Expect = 4.8
 Identities = 8/27 (29%), Positives = 16/27 (59%)
 Frame = -3

Query: 559 TKLRRDTGISQAAIFPHNRLVTRKGNI 479
           T++RRD G+  +  F     + R+G++
Sbjct: 109 TQIRRDRGLHVSCSFSAGSTIIREGDV 135


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 22.2 bits (45), Expect = 6.4
 Identities = 10/35 (28%), Positives = 20/35 (57%)
 Frame = +2

Query: 218 PTRLRSCLPVMNQMYKPRLRPHRPFXTNEHNSNKE 322
           PT+L+S +   +   + + + H    ++EH SN+E
Sbjct: 85  PTQLQSFMQQHSLYLQQQQQQHHQDSSSEHASNQE 119


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 22.2 bits (45), Expect = 6.4
 Identities = 16/49 (32%), Positives = 24/49 (48%)
 Frame = +1

Query: 646 SSPGRSGMARDTYQQRPAYRPVTE*S*TVAQLIPIRLNR*KV*HTALKE 792
           S  G  G  R + QQ+  YRP T+      Q   +R+NR +  +  LK+
Sbjct: 83  SCEGCKGFFRRSIQQKIQYRPCTK----NQQCSILRINRNRCQYCRLKK 127


>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 21.8 bits (44), Expect = 8.4
 Identities = 7/21 (33%), Positives = 13/21 (61%)
 Frame = -3

Query: 421 HQPTYITLPRGIHLVNIARKF 359
           H+   +TLP  +H+ N  R++
Sbjct: 673 HKDVDVTLPLDLHIQNAIREY 693


>AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.
          Length = 388

 Score = 21.8 bits (44), Expect = 8.4
 Identities = 12/43 (27%), Positives = 18/43 (41%)
 Frame = +3

Query: 276 VHTGPSXQTSTIQTKSFNTNANNKTKWLNFRAIFTRWMPLGSV 404
           VH+G     +T +   F      + KW     + TRW   G+V
Sbjct: 131 VHSGNIEAVTTKEKAKFPQEFFPECKWSRKGFLRTRWSISGTV 173


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 228,380
Number of Sequences: 438
Number of extensions: 5193
Number of successful extensions: 13
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28038087
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)