Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP16_F_I09
         (871 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U23177-3|AAA64333.2|  316|Caenorhabditis elegans Lethal protein ...    30   1.9  
AF025465-9|AAB71020.2|  136|Caenorhabditis elegans Hypothetical ...    29   3.3  
Z69903-7|CAA93776.1| 1607|Caenorhabditis elegans Hypothetical pr...    29   5.7  
Z69660-1|CAA93489.1| 1607|Caenorhabditis elegans Hypothetical pr...    29   5.7  

>U23177-3|AAA64333.2|  316|Caenorhabditis elegans Lethal protein 767
           protein.
          Length = 316

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = -1

Query: 736 NLLGAGIRPTGYLKHKTHHTIMDLVPTILR 647
           N +G     TGY+ H+    +MDL+PT +R
Sbjct: 261 NTVGNTSDTTGYITHQLQLELMDLIPTFIR 290


>AF025465-9|AAB71020.2|  136|Caenorhabditis elegans Hypothetical
           protein K02E7.11 protein.
          Length = 136

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 17/53 (32%), Positives = 29/53 (54%)
 Frame = -1

Query: 217 LLKTDKFDLKYHLNYIQIIYF*HINSLIIQLTHVSTVPIRLHIVSDPINFSCV 59
           +L+  K  L++H+ +  +I F +   LII L  ++ V   L IV + +NF  V
Sbjct: 74  VLQDQKRYLRFHIYFNSVITFIYFCKLIILLVSINMVTSILCIVCNFVNFCSV 126


>Z69903-7|CAA93776.1| 1607|Caenorhabditis elegans Hypothetical
           protein F39B1.1 protein.
          Length = 1607

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 3/66 (4%)
 Frame = -2

Query: 639 MFLLSCKLLHRKVTQS-YNTIQSAYLIVKFNTYLLVRHNREFMLHTHDFPKISVICPI-- 469
           + +L CK LH  V +  YN +Q  YL       L V H  +F+   H F ++   C +  
Sbjct: 522 VIMLLCKCLHGIVPEKLYNEMQK-YLASTTEDQL-VHHRNDFLREIHSFLELYCRCTVSR 579

Query: 468 VNL*PL 451
            N+ PL
Sbjct: 580 YNIPPL 585


>Z69660-1|CAA93489.1| 1607|Caenorhabditis elegans Hypothetical
           protein F39B1.1 protein.
          Length = 1607

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 3/66 (4%)
 Frame = -2

Query: 639 MFLLSCKLLHRKVTQS-YNTIQSAYLIVKFNTYLLVRHNREFMLHTHDFPKISVICPI-- 469
           + +L CK LH  V +  YN +Q  YL       L V H  +F+   H F ++   C +  
Sbjct: 522 VIMLLCKCLHGIVPEKLYNEMQK-YLASTTEDQL-VHHRNDFLREIHSFLELYCRCTVSR 579

Query: 468 VNL*PL 451
            N+ PL
Sbjct: 580 YNIPPL 585


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,403,154
Number of Sequences: 27780
Number of extensions: 382360
Number of successful extensions: 758
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 743
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 758
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2181923744
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)