Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP16_F_I05
(891 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC922.07c |||aldehyde dehydrogenase |Schizosaccharomyces pombe... 125 1e-29
SPAC9E9.09c |||aldehyde dehydrogenase|Schizosaccharomyces pombe|... 123 3e-29
SPAC1002.12c |||succinate-semialdehyde dehydrogenase |Schizosacc... 92 8e-20
SPAC139.05 |||succinate-semialdehyde dehydrogenase |Schizosaccha... 88 2e-18
SPCC550.10 |meu8||betaine aldehyde dehydrogenase |Schizosaccharo... 85 1e-17
SPBC21C3.15c |||aldehyde dehydrogenase |Schizosaccharomyces pomb... 38 0.003
SPAC167.03c |snu66||U4/U6 x U5 tri-snRNP complex subunit Snu66 |... 28 2.1
SPAC1093.03 |||inositol polyphosphate phosphatase |Schizosacchar... 28 2.1
SPAC19B12.02c |||1,3-beta-glucanosyltransferase|Schizosaccharomy... 27 3.6
SPBC27.04 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||M... 26 6.3
SPAC17A2.03c |vma6||V-type ATPase subunit d|Schizosaccharomyces ... 26 8.3
SPAC17A2.12 |||ATP-dependent DNA helicase|Schizosaccharomyces po... 26 8.3
>SPAC922.07c |||aldehyde dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 496
Score = 125 bits (301), Expect = 1e-29
Identities = 60/138 (43%), Positives = 80/138 (57%), Gaps = 1/138 (0%)
Frame = +1
Query: 424 GKP-VKQSEEEVYFSASVLRYYAGKADKILGNTIPSDGEVLTFTMKEPVGVCGQIIPWNY 600
GKP V + +V + ++LRY AG ADKI G IP+ E L + + P+GVCGQI+PWNY
Sbjct: 107 GKPLVSNARGDVDGTIALLRYCAGWADKIYGQVIPTGPEKLAYAKRTPIGVCGQIVPWNY 166
Query: 601 PIPMMSWKIAPALAAGCTVVLKPAEQTPLTXXXXXXXXQRSGFPPXXXXXXXXXXXXXXX 780
P+ M WKIAPALAAG +++K AE TPL+ + +GFP
Sbjct: 167 PLNMAGWKIAPALAAGNCIIIKSAETTPLSLLYFATLVEEAGFPKGVVNIISGLGTVAGS 226
Query: 781 XLTHHPDVDXIAFTGSLR 834
+ HP +D IAFTGS +
Sbjct: 227 YMAKHPGIDKIAFTGSTK 244
>SPAC9E9.09c |||aldehyde dehydrogenase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 503
Score = 123 bits (297), Expect = 3e-29
Identities = 68/176 (38%), Positives = 91/176 (51%), Gaps = 3/176 (1%)
Frame = +1
Query: 310 FPMXVPWTLLNAASY--CLS*-PNF*NPNLDT*LS*RL*NCGKPVKQSEEEVYFSASVLR 480
F PW ++A CLS + NL+ S + GK + + +V +A R
Sbjct: 73 FQTDAPWRKFSSAQRGRCLSRLADCIEQNLEYLASIETLDNGKSITLARGDVQAAADCFR 132
Query: 481 YYAGKADKILGNTIPSDGEVLTFTMKEPVGVCGQIIPWNYPIPMMSWKIAPALAAGCTVV 660
YY G ADK G TI +D + +T EP+GVCGQIIPWN+P M +WKIAPA+A G T++
Sbjct: 133 YYGGWADKDYGQTIETDIKRFAYTRHEPIGVCGQIIPWNFPFLMCAWKIAPAVACGNTII 192
Query: 661 LKPAEQTPLTXXXXXXXXQRSGFPPXXXXXXXXXXXXXXXXLTHHPDVDXIAFTGS 828
LK AE TPL+ GFPP ++ H D+D +AFTGS
Sbjct: 193 LKTAELTPLSALCLTKFVPECGFPPGVINVLSGDGRRCGNAISSHMDIDKVAFTGS 248
Score = 52.4 bits (120), Expect = 8e-08
Identities = 24/63 (38%), Positives = 37/63 (58%)
Frame = +2
Query: 131 KVDVKYTKLFINNEWVDAVSKKTFPTINPQDETVITQVAEGDKADIDLAVAAAKKAFHRY 310
K ++ LFINN+ VD+V +P E +I +VA+ D+ D+D+AV A+ AF
Sbjct: 17 KTYIQPVGLFINNQHVDSVHGGRVKVYSPSTEKLICEVADADEEDVDIAVKVARAAFQTD 76
Query: 311 SPW 319
+PW
Sbjct: 77 APW 79
>SPAC1002.12c |||succinate-semialdehyde dehydrogenase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 498
Score = 92.3 bits (219), Expect = 8e-20
Identities = 49/137 (35%), Positives = 79/137 (57%), Gaps = 2/137 (1%)
Frame = +1
Query: 424 GKPVKQSEEEVYFSASVLRYYAGKADKILGNT-IPSDGEVLTFTMKEPVGVCGQIIPWNY 600
GK + ++ EV ++A + ++AG+A +I G++ + S+ + T+K+PVGV G I PWN+
Sbjct: 112 GKALGDAKGEVVYAAKFIDWFAGEALRISGDSSMSSNPQNRIITIKQPVGVVGIITPWNF 171
Query: 601 PIPMMSWKIAPALAAGCTVVLKPAEQTPLTXXXXXXXXQRSGFPP-XXXXXXXXXXXXXX 777
P M++ K+ ALAAGCTVV++PA +TP T +R+G P
Sbjct: 172 PAAMITRKVGAALAAGCTVVIRPAAETPFTALALAKLAERAGVPAGVLNMVTANSPSEHG 231
Query: 778 XXLTHHPDVDXIAFTGS 828
LT +P + ++FTGS
Sbjct: 232 IELTTNPLIRKVSFTGS 248
Score = 31.1 bits (67), Expect = 0.22
Identities = 16/51 (31%), Positives = 23/51 (45%)
Frame = +2
Query: 158 FINNEWVDAVSKKTFPTINPQDETVITQVAEGDKADIDLAVAAAKKAFHRY 310
+I +WV A S KTF NP + V + + A+ A +AF Y
Sbjct: 27 YIGGKWVTAASGKTFDVENPGLNETLAPVTDMSVEETRKAIKVAHEAFLSY 77
>SPAC139.05 |||succinate-semialdehyde dehydrogenase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 493
Score = 87.8 bits (208), Expect = 2e-18
Identities = 50/138 (36%), Positives = 71/138 (51%), Gaps = 3/138 (2%)
Frame = +1
Query: 424 GKPVKQSEEEVYFSASVLRYYAGKADKILGNTIPSDGEVLTF--TMKEPVGVCGQIIPWN 597
GKP+ Q+E EV + L++YA +A + G+ PS + F ++K+PVGV I PWN
Sbjct: 106 GKPLSQAEMEVTTCSGYLKWYAAEAVRTFGDVAPSSLQSQNFLISIKQPVGVSALITPWN 165
Query: 598 YPIPMMSWKIAPALAAGCTVVLKPAEQTPLTXXXXXXXXQRSGFPP-XXXXXXXXXXXXX 774
+P M++ K ALAAGCT + PA +TP Q +GFP
Sbjct: 166 FPAAMIARKGGAALAAGCTAIFLPAFRTPYVCLGLVRLAQEAGFPDGVLNVITSSDASAH 225
Query: 775 XXXLTHHPDVDXIAFTGS 828
LT +P V ++FTGS
Sbjct: 226 GKELTTNPIVRKVSFTGS 243
Score = 39.9 bits (89), Expect = 5e-04
Identities = 17/58 (29%), Positives = 31/58 (53%)
Frame = +2
Query: 137 DVKYTKLFINNEWVDAVSKKTFPTINPQDETVITQVAEGDKADIDLAVAAAKKAFHRY 310
D + + F+ +W+ + + KTF NP +I +VA+ + A++AA +AF Y
Sbjct: 14 DKSHAQSFVQGKWISSPNNKTFEVDNPATGEIIGKVADVSVEETKKAISAANEAFKTY 71
>SPCC550.10 |meu8||betaine aldehyde dehydrogenase
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 500
Score = 85.4 bits (202), Expect = 1e-17
Identities = 46/141 (32%), Positives = 68/141 (48%), Gaps = 3/141 (2%)
Frame = +1
Query: 418 NCGKPVKQSEEEVYFSASVLRYYAGKADK---ILGNTIPSDGEVLTFTMKEPVGVCGQII 588
NCGKP + ++ A + YYA A+ + +P++ F + P GV G I
Sbjct: 111 NCGKPTPYALFDIDSCADMFEYYAEVAETDNPTVKVPLPNNPGFCAFEKRFPRGVIGVIT 170
Query: 589 PWNYPIPMMSWKIAPALAAGCTVVLKPAEQTPLTXXXXXXXXQRSGFPPXXXXXXXXXXX 768
PWN+P+ M WK+ PA+A+G VVLKP+E P + + +G P
Sbjct: 171 PWNFPLKMALWKLVPAIASGNCVVLKPSELAPWSCLEFALICKEAGLPDGVLNVIIGSGK 230
Query: 769 XXXXXLTHHPDVDXIAFTGSL 831
L+ HP + +AFTGSL
Sbjct: 231 ESGAALSCHPKIAYLAFTGSL 251
Score = 32.3 bits (70), Expect = 0.095
Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Frame = +2
Query: 155 LFINNEWVDAV--SKKTFPTINPQDETVITQVAEGDKADIDLAVAAAKKAF 301
LFI+ ++V + + K P INP E +I A D+D AV A F
Sbjct: 23 LFIDGKFVSPIEPAAKPIPLINPATEEIIGTCANASAKDVDSAVENAYNTF 73
>SPBC21C3.15c |||aldehyde dehydrogenase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 522
Score = 37.5 bits (83), Expect = 0.003
Identities = 17/41 (41%), Positives = 24/41 (58%)
Frame = +1
Query: 559 EPVGVCGQIIPWNYPIPMMSWKIAPALAAGCTVVLKPAEQT 681
EP+GV ++ WNYP+ I AL AG +V+K +E T
Sbjct: 126 EPLGVIAALVSWNYPLHNALGPIISALFAGNAIVVKGSELT 166
>SPAC167.03c |snu66||U4/U6 x U5 tri-snRNP complex subunit Snu66
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 649
Score = 27.9 bits (59), Expect = 2.1
Identities = 12/36 (33%), Positives = 17/36 (47%)
Frame = +2
Query: 158 FINNEWVDAVSKKTFPTINPQDETVITQVAEGDKAD 265
F+ D S+ TF TI PQ+ + E K+D
Sbjct: 224 FLQQSEADQPSEDTFTTIGPQNSLTVNSTIEKHKSD 259
>SPAC1093.03 |||inositol polyphosphate phosphatase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 832
Score = 27.9 bits (59), Expect = 2.1
Identities = 17/63 (26%), Positives = 34/63 (53%), Gaps = 3/63 (4%)
Frame = +3
Query: 408 ETLELWKTGKTIRRRSILF-RKRAQIL--RWKSGQDIRKYHSFRRRSPYVHHEGTCRSVR 578
E + L+ T+ + ++F KR Q L ++K+GQ +R+ + + YV+ E C++
Sbjct: 533 EAISLFLGNFTVHGKIVVFGEKRLQALTEKFKNGQLVRRDYRYWWTPVYVNQELRCKNAY 592
Query: 579 SDN 587
D+
Sbjct: 593 CDS 595
>SPAC19B12.02c |||1,3-beta-glucanosyltransferase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 542
Score = 27.1 bits (57), Expect = 3.6
Identities = 15/51 (29%), Positives = 25/51 (49%)
Frame = -1
Query: 285 AATAKSISALSPSATCVMTVSSCGLMVGKVFLLTASTHSLLINSLVYLTST 133
+ +A +SA S + TC +S+ G LTA ++++ NS ST
Sbjct: 442 SGSATLVSASSATGTCASYLSAAGSSATNAISLTADSNAVSRNSSASTMST 492
>SPBC27.04 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 1052
Score = 26.2 bits (55), Expect = 6.3
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
Frame = +3
Query: 570 SVRSDNTVELPHTNDVLENSTSLSCRMYR--CSEAS*TN 680
SVR +NT +L D++E + R++R SEA+ N
Sbjct: 357 SVRDENTKKLKELQDIIEEQSKHMARLHREGFSEAAENN 395
>SPAC17A2.03c |vma6||V-type ATPase subunit d|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 343
Score = 25.8 bits (54), Expect = 8.3
Identities = 14/47 (29%), Positives = 24/47 (51%)
Frame = -1
Query: 540 DFSV*RNGIS*YLVRFSSVISEHACGKVYFFFGLFYRFSTVLKSLAQ 400
+F R I+ + F + +S+ K+Y FG Y FST + + A+
Sbjct: 209 EFEADRRAITITINSFGTELSKEERAKMYPSFGRLYPFSTSILARAE 255
>SPAC17A2.12 |||ATP-dependent DNA helicase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 897
Score = 25.8 bits (54), Expect = 8.3
Identities = 25/105 (23%), Positives = 47/105 (44%), Gaps = 3/105 (2%)
Frame = +3
Query: 405 LETLELWKTGKT---IRRRSILFRKRAQILRWKSGQDIRKYHSFRRRSPYVHHEGTCRSV 575
++T+ L T K+ +R+ +++ A + +W K H ++ S Y+HH T +++
Sbjct: 284 IQTIALLLTQKSQDPLRKTNLIVVSVALLHQWAEELST-KVHPSKKLSVYIHHGSTKKNL 342
Query: 576 RSDNTVELPHTNDVLENSTSLSCRMYRCSEAS*TNTTNGARCCRP 710
++ EL + VL T+ S Y + N N A P
Sbjct: 343 ---DSYELSQYDVVL---TTYSMLAYEMKQNDAFNNNNPATATPP 381
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,558,507
Number of Sequences: 5004
Number of extensions: 75294
Number of successful extensions: 214
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 197
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 206
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 448490560
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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