Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP16_F_I05
(891 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_01_1105 + 9102059-9102167,9103770-9103907,9104125-9104267,910... 123 2e-28
06_03_0627 + 22903346-22903523,22906010-22906152,22906235-229066... 117 1e-26
01_05_0544 + 23098921-23098953,23099209-23099272,23099942-231000... 115 4e-26
02_05_0620 - 30412004-30412429,30412509-30412646,30412729-304128... 113 1e-25
01_05_0545 + 23109920-23110040,23113363-23113505,23113626-231140... 107 9e-24
04_04_0154 - 23146445-23146535,23146689-23146795,23146933-231469... 104 1e-22
02_01_0550 + 4044683-4044784,4044862-4044975,4045277-4045360,404... 103 3e-22
08_02_0717 + 20372728-20372836,20372936-20373078,20374131-203742... 77 3e-14
08_02_0811 + 21438848-21439001,21439469-21439662,21439769-214398... 65 8e-11
07_01_0637 + 4767021-4767083,4767175-4767249,4767339-4767500,476... 58 7e-09
09_04_0272 - 16278136-16278289,16278873-16278970,16279090-162792... 46 5e-05
11_01_0550 + 4355857-4356051,4357287-4357355,4357429-4357561,435... 44 2e-04
12_01_0497 + 3946179-3946322,3947274-3947342,3948733-3948829,395... 43 3e-04
04_04_0660 - 27017692-27017928,27018101-27018250,27018337-270184... 36 0.033
01_05_0543 + 23093519-23093624,23093912-23093934 35 0.076
07_03_1752 - 29218348-29218524,29218593-29218736,29218957-292191... 31 1.2
04_04_0844 - 28637393-28638118,28638206-28638283,28638431-286386... 31 1.2
04_04_0158 - 23187070-23187264,23187347-23187477,23187550-231877... 29 5.0
02_04_0216 + 20986231-20988021 29 6.6
01_05_0402 + 21810906-21811831,21811875-21812472,21813119-21813391 28 8.7
>06_01_1105 +
9102059-9102167,9103770-9103907,9104125-9104267,
9104362-9104515,9104610-9104839,9105382-9105471,
9105606-9105779,9105873-9106010,9106212-9106349,
9106450-9106511,9106744-9106972,9108531-9109364
Length = 812
Score = 123 bits (297), Expect = 2e-28
Identities = 64/136 (47%), Positives = 77/136 (56%), Gaps = 1/136 (0%)
Frame = +1
Query: 424 GKPVKQSEE-EVYFSASVLRYYAGKADKILGNTIPSDGEVLTFTMKEPVGVCGQIIPWNY 600
GKP Q+ EV A ++RYYAG ADKI G +P+DG + EP+GV GQIIPWN+
Sbjct: 159 GKPYAQAANIEVPMVARLMRYYAGWADKIHGLVVPADGPHHVQVLHEPIGVAGQIIPWNF 218
Query: 601 PIPMMSWKIAPALAAGCTVVLKPAEQTPLTXXXXXXXXQRSGFPPXXXXXXXXXXXXXXX 780
P+ M +WK+ PALA G TVVLK AEQTPL+ +G P
Sbjct: 219 PLLMFAWKVGPALACGNTVVLKTAEQTPLSALFASKLLHEAGLPDGVVNVVSGFGPTAGA 278
Query: 781 XLTHHPDVDXIAFTGS 828
L H DVD IAFTGS
Sbjct: 279 ALASHMDVDKIAFTGS 294
Score = 66.1 bits (154), Expect = 4e-11
Identities = 32/62 (51%), Positives = 43/62 (69%)
Frame = +2
Query: 134 VDVKYTKLFINNEWVDAVSKKTFPTINPQDETVITQVAEGDKADIDLAVAAAKKAFHRYS 313
V V YT+L I+ ++VD+ S KTFPT++P+ +I VAEGD DI+ AV AA+KAF
Sbjct: 64 VQVNYTQLLIDGKFVDSASGKTFPTLDPRTGELIAHVAEGDAEDINRAVHAARKAFDE-G 122
Query: 314 PW 319
PW
Sbjct: 123 PW 124
>06_03_0627 +
22903346-22903523,22906010-22906152,22906235-22906618,
22906980-22907069,22907147-22907320,22907414-22907551,
22907719-22907856,22907958-22908019,22908240-22908513
Length = 526
Score = 117 bits (282), Expect = 1e-26
Identities = 57/138 (41%), Positives = 82/138 (59%), Gaps = 1/138 (0%)
Frame = +1
Query: 418 NCGKPVKQSEE-EVYFSASVLRYYAGKADKILGNTIPSDGEVLTFTMKEPVGVCGQIIPW 594
+ GKP+ + +V +LRY+AG ADKI G T+ ++ +T++EP+GV G I+PW
Sbjct: 134 DAGKPLAAARAVDVGECVGILRYFAGAADKIHGETLKMSRQLQGYTLREPLGVAGLIVPW 193
Query: 595 NYPIPMMSWKIAPALAAGCTVVLKPAEQTPLTXXXXXXXXQRSGFPPXXXXXXXXXXXXX 774
N+P M K++PALAAGCTVV+KPAEQTPL+ +++G P
Sbjct: 194 NFPAIMFFSKVSPALAAGCTVVVKPAEQTPLSALFLAHLSKQAGVPDGVINVVTGFGPTA 253
Query: 775 XXXLTHHPDVDXIAFTGS 828
++ H DVD +AFTGS
Sbjct: 254 GAAISSHMDVDVVAFTGS 271
Score = 71.7 bits (168), Expect = 7e-13
Identities = 33/55 (60%), Positives = 43/55 (78%)
Frame = +2
Query: 137 DVKYTKLFINNEWVDAVSKKTFPTINPQDETVITQVAEGDKADIDLAVAAAKKAF 301
+++YTKLFIN +VDA S KTF T +P+ VI +VAEGDK D+DLAV AA++AF
Sbjct: 42 EIRYTKLFINGRFVDAASGKTFETRDPRTGDVIARVAEGDKEDVDLAVKAAREAF 96
>01_05_0544 +
23098921-23098953,23099209-23099272,23099942-23100084,
23100246-23100719,23100950-23101123,23101230-23101367,
23101489-23101589,23101910-23102183
Length = 466
Score = 115 bits (277), Expect = 4e-26
Identities = 54/121 (44%), Positives = 73/121 (60%)
Frame = +1
Query: 466 ASVLRYYAGKADKILGNTIPSDGEVLTFTMKEPVGVCGQIIPWNYPIPMMSWKIAPALAA 645
A++LRYYAG ADK+ G T+ +T+KEPVGV G I+PWNYP M +K +PALAA
Sbjct: 124 ANLLRYYAGAADKVHGETLKMARPCHGYTLKEPVGVVGHIVPWNYPTTMFFFKASPALAA 183
Query: 646 GCTVVLKPAEQTPLTXXXXXXXXQRSGFPPXXXXXXXXXXXXXXXXLTHHPDVDXIAFTG 825
GCT+V+KPAEQTPL+ + +G P ++ H D+D ++FTG
Sbjct: 184 GCTMVVKPAEQTPLSALFYAHLAKLAGVPDGVLNVVPGFGPTAGAAISSHMDIDKVSFTG 243
Query: 826 S 828
S
Sbjct: 244 S 244
Score = 53.6 bits (123), Expect = 2e-07
Identities = 28/64 (43%), Positives = 43/64 (67%)
Frame = +2
Query: 128 VKVDVKYTKLFINNEWVDAVSKKTFPTINPQDETVITQVAEGDKADIDLAVAAAKKAFHR 307
++V V + +L + ++ + KTF T +P+ VI ++AEGDKADIDLAV AA++AF
Sbjct: 12 LQVFVSWKQLKVVDQRFRDLMGKTFETRDPRTGEVIAKIAEGDKADIDLAVKAAREAFD- 70
Query: 308 YSPW 319
+ PW
Sbjct: 71 HGPW 74
>02_05_0620 -
30412004-30412429,30412509-30412646,30412729-30412866,
30412966-30413139,30413211-30413684,30413775-30413917,
30414002-30414160,30414943-30415042
Length = 583
Score = 113 bits (273), Expect = 1e-25
Identities = 59/136 (43%), Positives = 75/136 (55%), Gaps = 1/136 (0%)
Frame = +1
Query: 424 GKPVKQSE-EEVYFSASVLRYYAGKADKILGNTIPSDGEVLTFTMKEPVGVCGQIIPWNY 600
GK ++Q+ EV A +RYY G ADKI G +P+DG + EP+GV GQIIPWN+
Sbjct: 163 GKTLEQTTGTEVPMVARYMRYYGGWADKIHGLVVPADGPHHVQVLHEPIGVAGQIIPWNF 222
Query: 601 PIPMMSWKIAPALAAGCTVVLKPAEQTPLTXXXXXXXXQRSGFPPXXXXXXXXXXXXXXX 780
P+ M +WK+ PALA G VVLK AEQTPL+ +G P
Sbjct: 223 PLLMFAWKVGPALACGNAVVLKTAEQTPLSALFVASLLHEAGLPDGVLNVVSGFGPTAGA 282
Query: 781 XLTHHPDVDXIAFTGS 828
L+ H VD +AFTGS
Sbjct: 283 ALSSHMGVDKLAFTGS 298
Score = 74.5 bits (175), Expect = 1e-13
Identities = 36/62 (58%), Positives = 45/62 (72%)
Frame = +2
Query: 134 VDVKYTKLFINNEWVDAVSKKTFPTINPQDETVITQVAEGDKADIDLAVAAAKKAFHRYS 313
VDVKYTKL IN +VDA S KTF T++P+ VI +VAEGD D++ AVAAA++AF
Sbjct: 68 VDVKYTKLLINGNFVDAASGKTFATVDPRTGDVIARVAEGDAEDVNRAVAAARRAFDE-G 126
Query: 314 PW 319
PW
Sbjct: 127 PW 128
>01_05_0545 +
23109920-23110040,23113363-23113505,23113626-23114009,
23114106-23114219,23114310-23114483,23114608-23114745,
23114884-23115021,23115094-23115155,23115268-23115541
Length = 515
Score = 107 bits (258), Expect = 9e-24
Identities = 55/130 (42%), Positives = 76/130 (58%), Gaps = 8/130 (6%)
Frame = +1
Query: 463 SASVLRYYAGKADKILGNTIPSDGEVLTFTMKEPVGVCGQIIPWNYPIPMMSWKIAPALA 642
+A ++RYYAG ADKI G ++ G+ +T++EP+GV G IIPWN+P M K++PALA
Sbjct: 131 AAQMMRYYAGAADKIHGESLRVAGKYQGYTLREPIGVVGVIIPWNFPTMMFFLKVSPALA 190
Query: 643 AGCTVVLKPAEQTPLTXXXXXXXXQ--------RSGFPPXXXXXXXXXXXXXXXXLTHHP 798
AGCT+V+KPAEQTPL+ + ++G P L+ H
Sbjct: 191 AGCTIVVKPAEQTPLSALYYAHLAKLCTFDIIIQAGVPDGVINVVPGFGPTAGAALSSHM 250
Query: 799 DVDXIAFTGS 828
DVD +AFTGS
Sbjct: 251 DVDSVAFTGS 260
Score = 72.5 bits (170), Expect = 4e-13
Identities = 34/65 (52%), Positives = 47/65 (72%)
Frame = +2
Query: 125 MVKVDVKYTKLFINNEWVDAVSKKTFPTINPQDETVITQVAEGDKADIDLAVAAAKKAFH 304
+V ++K+TKLFIN E+VDA S KTF T +P+ V+ +AE DKAD+DLAV AA++AF
Sbjct: 19 LVVPEIKFTKLFINGEFVDAASGKTFKTRDPRTGDVLAHIAEADKADVDLAVKAAREAF- 77
Query: 305 RYSPW 319
+ W
Sbjct: 78 EHGKW 82
>04_04_0154 -
23146445-23146535,23146689-23146795,23146933-23146993,
23147070-23147221,23147306-23147383,23147696-23147809,
23147880-23147956,23148128-23148194,23148341-23148406,
23148528-23148651,23148733-23148825,23149446-23149594,
23149681-23149761,23150502-23150644,23150758-23150872
Length = 505
Score = 104 bits (249), Expect = 1e-22
Identities = 55/140 (39%), Positives = 74/140 (52%), Gaps = 5/140 (3%)
Frame = +1
Query: 424 GKPVKQSEEEVYFSASVLRYYAGKADKILGN-----TIPSDGEVLTFTMKEPVGVCGQII 588
GKP+ ++ ++ A+ YYA A+ + G ++P + ++ +KEP+GV G I
Sbjct: 103 GKPLDEAAGDMEDVAACFEYYADLAEALDGKQRAPISLPMEN-FESYVLKEPIGVVGLIT 161
Query: 589 PWNYPIPMMSWKIAPALAAGCTVVLKPAEQTPLTXXXXXXXXQRSGFPPXXXXXXXXXXX 768
PWNYP+ M +WK+APALAAGCT VLKP+E LT G PP
Sbjct: 162 PWNYPLLMATWKVAPALAAGCTAVLKPSELASLTCLELGGICAEIGLPPGVLNIITGLGT 221
Query: 769 XXXXXLTHHPDVDXIAFTGS 828
L HP VD IAFTGS
Sbjct: 222 EAGAPLASHPHVDKIAFTGS 241
Score = 39.5 bits (88), Expect = 0.004
Identities = 18/51 (35%), Positives = 26/51 (50%)
Frame = +2
Query: 155 LFINNEWVDAVSKKTFPTINPQDETVITQVAEGDKADIDLAVAAAKKAFHR 307
LFI W + + P +NP E I + D++LAV+AA+ AF R
Sbjct: 12 LFIGGGWREPSLGRRLPVVNPATEATIGDIPAATAEDVELAVSAARDAFGR 62
>02_01_0550 +
4044683-4044784,4044862-4044975,4045277-4045360,
4045818-4045917,4046923-4046971,4047071-4047158,
4047251-4047361,4047771-4047833,4047942-4048052,
4048517-4048582,4048689-4048766,4049553-4049630,
4049784-4049850,4049930-4050015,4050301-4050333,
4050426-4050458,4050754-4050854,4050986-4051071,
4051478-4051584,4051683-4051839,4051854-4051984
Length = 614
Score = 103 bits (246), Expect = 3e-22
Identities = 55/138 (39%), Positives = 77/138 (55%), Gaps = 3/138 (2%)
Frame = +1
Query: 424 GKPVKQSEEEVYFSASVLRYYAGKADKILGNTIP---SDGEVLTFTMKEPVGVCGQIIPW 594
GKP+K++ EV + AS + Y+A +A +I G+ IP SD +L +K+PVGV G + PW
Sbjct: 170 GKPMKEALVEVTYGASFIEYFAEEAKRIYGDIIPPTLSDRRLLV--LKQPVGVVGAVTPW 227
Query: 595 NYPIPMMSWKIAPALAAGCTVVLKPAEQTPLTXXXXXXXXQRSGFPPXXXXXXXXXXXXX 774
N+P+ M++ K+ PALA GCTVV+KP+E TPLT ++G P
Sbjct: 228 NFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAADLALQAGIPAGAINVVMGNAPEI 287
Query: 775 XXXLTHHPDVDXIAFTGS 828
L V I FTGS
Sbjct: 288 GDALLQSTQVRKITFTGS 305
>08_02_0717 +
20372728-20372836,20372936-20373078,20374131-20374211,
20374307-20374510,20374789-20374796,20375153-20375245,
20375377-20375500,20375585-20375650,20375841-20375907,
20376600-20376676,20377032-20377145,20377546-20377623,
20377705-20377856,20377960-20378020,20378292-20378398,
20378497-20378562,20379099-20379177,20379671-20379967
Length = 641
Score = 76.6 bits (180), Expect = 3e-14
Identities = 51/163 (31%), Positives = 73/163 (44%), Gaps = 26/163 (15%)
Frame = +1
Query: 418 NCGKPVKQSEEEVYFSASVLRYYAGKADKILGN-----TIPSDGEVLTFTMKEPVGVCGQ 582
+CGKP+ ++ ++ A Y+A A+ + ++P + + KEP+GV G
Sbjct: 99 DCGKPLDEAAWDMDDVAGCFEYFADLAESLDKRQNAPVSLPMEN-FKCYLRKEPIGVVGL 157
Query: 583 IIPW---------------------NYPIPMMSWKIAPALAAGCTVVLKPAEQTPLTXXX 699
I PW NYP+ M +WK+APALAAGCT VLKP+E +T
Sbjct: 158 ITPWYFTFFSHPALIFIYDPSMALMNYPLLMATWKVAPALAAGCTAVLKPSELASVTCLE 217
Query: 700 XXXXXQRSGFPPXXXXXXXXXXXXXXXXLTHHPDVDXIAFTGS 828
+ G P L+ HP VD +AFTGS
Sbjct: 218 LADVCKEVGLPSGVLNIVTGLGSEAGAPLSSHPGVDKVAFTGS 260
Score = 43.2 bits (97), Expect = 3e-04
Identities = 19/52 (36%), Positives = 29/52 (55%)
Frame = +2
Query: 152 KLFINNEWVDAVSKKTFPTINPQDETVITQVAEGDKADIDLAVAAAKKAFHR 307
+LF+ EW + P +NP E+ I ++ G D+D AVAAA++A R
Sbjct: 9 QLFVAGEWRAPALGRRLPVVNPATESPIGEIPAGTAEDVDAAVAAAREALKR 60
>08_02_0811 +
21438848-21439001,21439469-21439662,21439769-21439897,
21441552-21441671,21441751-21441887,21441969-21442124,
21442565-21442943,21443041-21443157,21443225-21443371
Length = 510
Score = 64.9 bits (151), Expect = 8e-11
Identities = 45/141 (31%), Positives = 64/141 (45%), Gaps = 8/141 (5%)
Frame = +1
Query: 427 KPVKQSEEEVYFSASVLRYYAGKADKILG-------NTIP-SDGEVLTFTMKEPVGVCGQ 582
KP K + EV S ++ Y A + +ILG ++ P ++ + K P+GV
Sbjct: 108 KPAKDAISEVVRSGDLVSYTAEEGVRILGEGKLLVSDSFPGNERNKYCLSSKVPLGVVLA 167
Query: 583 IIPWNYPIPMMSWKIAPALAAGCTVVLKPAEQTPLTXXXXXXXXQRSGFPPXXXXXXXXX 762
I P+NYP+ + KI PAL AG +VLKP Q + +GFP
Sbjct: 168 IPPFNYPVNLAVSKIGPALIAGNALVLKPPTQGAVAALHMVHCFHLAGFPKGLINCVTGK 227
Query: 763 XXXXXXXLTHHPDVDXIAFTG 825
LT HP V+ I+FTG
Sbjct: 228 GSEIGDFLTMHPGVNCISFTG 248
>07_01_0637 +
4767021-4767083,4767175-4767249,4767339-4767500,
4767624-4767702,4767922-4768076,4768225-4768288,
4768928-4769007,4769366-4769431,4769932-4769982,
4770087-4770238,4770270-4770287,4770323-4770413,
4771156-4771236,4771330-4771407,4772315-4772350,
4772425-4772468,4772567-4772645,4773035-4773125,
4773268-4773374
Length = 523
Score = 58.4 bits (135), Expect = 7e-09
Identities = 30/104 (28%), Positives = 51/104 (49%), Gaps = 1/104 (0%)
Frame = +1
Query: 424 GKPVKQSEEEVYFSASVLRYYAGKADKILGNTIPS-DGEVLTFTMKEPVGVCGQIIPWNY 600
GK +K + +V+ V+ + G +G + + + TF+++EP+GVC I P+N+
Sbjct: 112 GKTLKDAWGDVFRGLEVVEHACGMGTLQMGEYVSNVSNGIDTFSIREPLGVCAGICPFNF 171
Query: 601 PIPMMSWKIAPALAAGCTVVLKPAEQTPLTXXXXXXXXQRSGFP 732
P + W A+ G T VLKP+E+ P +G P
Sbjct: 172 PAMIPLWMFPIAVTCGNTFVLKPSEKDPGAAMMLAELAMEAGLP 215
>09_04_0272 -
16278136-16278289,16278873-16278970,16279090-16279230,
16279701-16279865,16279941-16280117,16280330-16280510,
16280784-16280829,16281178-16281241,16281331-16281353,
16281964-16282036,16282410-16282541,16283343-16283429,
16283488-16283700
Length = 517
Score = 45.6 bits (103), Expect = 5e-05
Identities = 28/89 (31%), Positives = 43/89 (48%), Gaps = 1/89 (1%)
Frame = +1
Query: 424 GKPVKQSEEEVYFSASVLRYYAGKADKILGNTIPSDG-EVLTFTMKEPVGVCGQIIPWNY 600
GK + + EV + Y G + ++ G+ IPS+ + + P+GV G I +N+
Sbjct: 133 GKILPEGIGEVQEIIDMCDYAVGLSRQLNGSIIPSERPNHMMMEVWNPLGVVGVITAFNF 192
Query: 601 PIPMMSWKIAPALAAGCTVVLKPAEQTPL 687
P ++ W AL G VV K A TPL
Sbjct: 193 PCAVLGWNACIALVCGNCVVWKGAPTTPL 221
>11_01_0550 +
4355857-4356051,4357287-4357355,4357429-4357561,
4358248-4358454,4358601-4358716,4358814-4358918,
4359008-4359180,4359273-4359363,4359682-4359831,
4359928-4360173
Length = 494
Score = 44.0 bits (99), Expect = 2e-04
Identities = 24/58 (41%), Positives = 33/58 (56%)
Frame = +1
Query: 517 TIPSDGEVLTFTMKEPVGVCGQIIPWNYPIPMMSWKIAPALAAGCTVVLKPAEQTPLT 690
T PS ++++ EP+GV I WNYP + + A+AAG VVLKP+E P T
Sbjct: 107 TFPSTAQIVS----EPLGVVLVISAWNYPFLLSIDPVIGAIAAGNAVVLKPSEIAPAT 160
>12_01_0497 +
3946179-3946322,3947274-3947342,3948733-3948829,
3951827-3952033,3952149-3952264,3953189-3953293,
3953380-3953552,3953647-3953737,3953869-3954018,
3954482-3954724
Length = 464
Score = 43.2 bits (97), Expect = 3e-04
Identities = 26/58 (44%), Positives = 30/58 (51%)
Frame = +1
Query: 517 TIPSDGEVLTFTMKEPVGVCGQIIPWNYPIPMMSWKIAPALAAGCTVVLKPAEQTPLT 690
T PS V EP+GV I WNYP + I A+AAG VVLKP+E P T
Sbjct: 78 TFPSTARVAA----EPLGVVLVISAWNYPFLLSIDPIIGAIAAGNAVVLKPSEVAPAT 131
>04_04_0660 -
27017692-27017928,27018101-27018250,27018337-27018427,
27018512-27018672,27018783-27019015,27019119-27019325,
27021411-27021507,27021636-27021677,27021802-27022056
Length = 490
Score = 36.3 bits (80), Expect = 0.033
Identities = 18/44 (40%), Positives = 24/44 (54%)
Frame = +1
Query: 559 EPVGVCGQIIPWNYPIPMMSWKIAPALAAGCTVVLKPAEQTPLT 690
+P+GV WN P+ + + ALAAG V LKP+E P T
Sbjct: 116 QPLGVILVFSCWNVPLGLSLEPLVGALAAGNAVALKPSELAPAT 159
>01_05_0543 + 23093519-23093624,23093912-23093934
Length = 42
Score = 35.1 bits (77), Expect = 0.076
Identities = 14/23 (60%), Positives = 20/23 (86%)
Frame = +2
Query: 131 KVDVKYTKLFINNEWVDAVSKKT 199
K+++K+TKLFIN +VDAVS +T
Sbjct: 16 KLEIKFTKLFINGRFVDAVSDET 38
>07_03_1752 -
29218348-29218524,29218593-29218736,29218957-29219148,
29219225-29219440,29219873-29220010,29220137-29220232,
29221204-29221357,29221976-29222098,29222291-29222418,
29222669-29222773,29223396-29223437,29223631-29223746,
29223805-29223916
Length = 580
Score = 31.1 bits (67), Expect = 1.2
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +1
Query: 562 PVGVCGQIIPWNYPIPMMSWKIAPALAAGCTVVLK 666
P+GV G I+ WNYP + + A+ +G V+K
Sbjct: 226 PLGVIGAIVSWNYPFHNVFNPMLAAIFSGNAAVIK 260
>04_04_0844 -
28637393-28638118,28638206-28638283,28638431-28638607,
28639124-28639537
Length = 464
Score = 31.1 bits (67), Expect = 1.2
Identities = 18/50 (36%), Positives = 27/50 (54%)
Frame = +3
Query: 435 KTIRRRSILFRKRAQILRWKSGQDIRKYHSFRRRSPYVHHEGTCRSVRSD 584
K + R + K A+IL +G+ R H+ RRRS HH +C S+ S+
Sbjct: 250 KWVEERYLDDEKNAKILEVDTGKPGR--HASRRRSGSHHHHSSCSSMTSE 297
>04_04_0158 -
23187070-23187264,23187347-23187477,23187550-23187763,
23187834-23187932,23188034-23188156,23188247-23188366,
23188447-23188506,23188592-23188884,23189554-23189707,
23189813-23190130,23190668-23190798,23191001-23191586,
23192125-23192739
Length = 1012
Score = 29.1 bits (62), Expect = 5.0
Identities = 17/56 (30%), Positives = 25/56 (44%)
Frame = +3
Query: 444 RRRSILFRKRAQILRWKSGQDIRKYHSFRRRSPYVHHEGTCRSVRSDNTVELPHTN 611
R IL RK ++ W+SG I Y + PY H R +++D HT+
Sbjct: 199 RTHEILERKTGGLVIWRSGSTIILYRGTDYKYPYFHD----REMKNDMDESSEHTS 250
>02_04_0216 + 20986231-20988021
Length = 596
Score = 28.7 bits (61), Expect = 6.6
Identities = 15/50 (30%), Positives = 26/50 (52%)
Frame = -1
Query: 303 WNAFFAAATAKSISALSPSATCVMTVSSCGLMVGKVFLLTASTHSLLINS 154
W A AAA A + +A + + V+ + + G V L A+ H+LL+ +
Sbjct: 9 WPAAAAAAPASAAAASAVTVEAVLALLERAISAGDVRRLGAAVHALLVKT 58
>01_05_0402 + 21810906-21811831,21811875-21812472,21813119-21813391
Length = 598
Score = 28.3 bits (60), Expect = 8.7
Identities = 13/30 (43%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Frame = -1
Query: 276 AKSISALSP-SATCVMTVSSCGLMVGKVFL 190
A S++ + P ATCV+T+S CG+ G L
Sbjct: 201 ANSVAIVPPLRATCVITMSHCGIGTGVAIL 230
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,196,966
Number of Sequences: 37544
Number of extensions: 529039
Number of successful extensions: 1459
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1388
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1446
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2506954360
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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