Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP16_F_I03
         (924 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            25   0.61 
AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    25   4.3  
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    24   5.7  

>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 24.6 bits (51), Expect(2) = 0.61
 Identities = 10/27 (37%), Positives = 10/27 (37%)
 Frame = +3

Query: 837 PLPPPXGXPXGXXXAPPXXGXGXRXPP 917
           P PPP G P       P  G     PP
Sbjct: 586 PPPPPMGPPPSPLAGGPLGGPAGSRPP 612



 Score = 21.0 bits (42), Expect(2) = 0.61
 Identities = 7/14 (50%), Positives = 7/14 (50%)
 Frame = +3

Query: 726 PXRXPXXXPPXPPP 767
           P   P   PP PPP
Sbjct: 577 PNAQPPPAPPPPPP 590


>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
           transcription factor FRU-MB protein.
          Length = 759

 Score = 24.6 bits (51), Expect = 4.3
 Identities = 10/22 (45%), Positives = 11/22 (50%)
 Frame = -1

Query: 768 PGEGXGGXXGGXAXEXXKSGGV 703
           PG G GG  GG       SGG+
Sbjct: 650 PGSGGGGGGGGGGGGSVGSGGI 671


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 24.2 bits (50), Expect = 5.7
 Identities = 14/39 (35%), Positives = 16/39 (41%), Gaps = 3/39 (7%)
 Frame = -1

Query: 648 PXXXRPQXGPXTVPGLXXAXRXXXPS---XGXPXXGGQP 541
           P   RPQ  P  VPG+    +   PS      P   GQP
Sbjct: 225 PMPMRPQMPPGAVPGMQPGMQPRPPSAQGMQRPPMMGQP 263


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 497,179
Number of Sequences: 2352
Number of extensions: 7129
Number of successful extensions: 17
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 100468593
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)