Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP16_F_I02
(981 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY113465-1|AAM29470.1| 151|Drosophila melanogaster RE39820p pro... 182 5e-46
AF038598-1|AAB92621.1| 151|Drosophila melanogaster small nuclea... 182 5e-46
AE013599-1407|AAF58566.1| 151|Drosophila melanogaster CG8427-PA... 182 5e-46
BT001620-1|AAN71375.1| 154|Drosophila melanogaster RE35747p pro... 54 4e-07
AE014134-1871|AAF52938.3| 154|Drosophila melanogaster CG17768-P... 54 4e-07
AE014296-2169|AAF49893.1| 124|Drosophila melanogaster CG10753-P... 42 0.002
AY071359-1|AAL48981.1| 124|Drosophila melanogaster RE39488p pro... 41 0.002
AE014298-1343|AAF46505.2| 3687|Drosophila melanogaster CG32702-P... 31 1.8
BT021227-1|AAX33375.1| 124|Drosophila melanogaster RH43429p pro... 30 4.2
AB028139-1|BAA78208.1| 881|Drosophila melanogaster Gal4 protein. 29 7.4
AY075349-1|AAL68208.1| 1457|Drosophila melanogaster GH23785p pro... 29 9.8
AE014298-1254|AAF46430.2| 1457|Drosophila melanogaster CG10966-P... 29 9.8
AE014298-1253|ABI30971.1| 1475|Drosophila melanogaster CG10966-P... 29 9.8
>AY113465-1|AAM29470.1| 151|Drosophila melanogaster RE39820p
protein.
Length = 151
Score = 182 bits (444), Expect = 5e-46
Identities = 88/103 (85%), Positives = 93/103 (90%), Gaps = 3/103 (2%)
Frame = +3
Query: 186 MSIGVPIKVLHEAEGHVVTCETNTGEVYRGKLIEAEDNMNCQMTLVTVTYRDGRVAQLEN 365
MSIGVPIKVLHEAEGH++TCET TGEVYRGKLIEAEDNMNCQMT +TVTYRDGR A LEN
Sbjct: 1 MSIGVPIKVLHEAEGHIITCETITGEVYRGKLIEAEDNMNCQMTQITVTYRDGRTANLEN 60
Query: 366 VYIRGSKIRFLILPDMLKNAPMFKRQGNK---PTAGRGKSAIL 485
VYIRGSKIRFLILPDMLKNAPMFK+Q K TAGRGK+AIL
Sbjct: 61 VYIRGSKIRFLILPDMLKNAPMFKKQTGKGLGGTAGRGKAAIL 103
>AF038598-1|AAB92621.1| 151|Drosophila melanogaster small nuclear
ribonucleoproteinSm D3 protein.
Length = 151
Score = 182 bits (444), Expect = 5e-46
Identities = 88/103 (85%), Positives = 93/103 (90%), Gaps = 3/103 (2%)
Frame = +3
Query: 186 MSIGVPIKVLHEAEGHVVTCETNTGEVYRGKLIEAEDNMNCQMTLVTVTYRDGRVAQLEN 365
MSIGVPIKVLHEAEGH++TCET TGEVYRGKLIEAEDNMNCQMT +TVTYRDGR A LEN
Sbjct: 1 MSIGVPIKVLHEAEGHIITCETITGEVYRGKLIEAEDNMNCQMTQITVTYRDGRTANLEN 60
Query: 366 VYIRGSKIRFLILPDMLKNAPMFKRQGNK---PTAGRGKSAIL 485
VYIRGSKIRFLILPDMLKNAPMFK+Q K TAGRGK+AIL
Sbjct: 61 VYIRGSKIRFLILPDMLKNAPMFKKQTGKGLGGTAGRGKAAIL 103
>AE013599-1407|AAF58566.1| 151|Drosophila melanogaster CG8427-PA
protein.
Length = 151
Score = 182 bits (444), Expect = 5e-46
Identities = 88/103 (85%), Positives = 93/103 (90%), Gaps = 3/103 (2%)
Frame = +3
Query: 186 MSIGVPIKVLHEAEGHVVTCETNTGEVYRGKLIEAEDNMNCQMTLVTVTYRDGRVAQLEN 365
MSIGVPIKVLHEAEGH++TCET TGEVYRGKLIEAEDNMNCQMT +TVTYRDGR A LEN
Sbjct: 1 MSIGVPIKVLHEAEGHIITCETITGEVYRGKLIEAEDNMNCQMTQITVTYRDGRTANLEN 60
Query: 366 VYIRGSKIRFLILPDMLKNAPMFKRQGNK---PTAGRGKSAIL 485
VYIRGSKIRFLILPDMLKNAPMFK+Q K TAGRGK+AIL
Sbjct: 61 VYIRGSKIRFLILPDMLKNAPMFKKQTGKGLGGTAGRGKAAIL 103
>BT001620-1|AAN71375.1| 154|Drosophila melanogaster RE35747p
protein.
Length = 154
Score = 53.6 bits (123), Expect = 4e-07
Identities = 26/72 (36%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Frame = +3
Query: 198 VPIKVLHEAEGHVVTCETNTGEVYRGKLIEAEDNMNCQMTLVTVTYRDG-RVAQLENVYI 374
+P+ +L A+ H + E GE Y G L+ + MN + V T +DG R ++ YI
Sbjct: 2 LPLSLLKTAQSHPMLVELKNGETYNGHLVSCDSWMNINLRDVICTSKDGDRFWRMPECYI 61
Query: 375 RGSKIRFLILPD 410
RGS I++L +PD
Sbjct: 62 RGSTIKYLRIPD 73
>AE014134-1871|AAF52938.3| 154|Drosophila melanogaster CG17768-PA,
isoform A protein.
Length = 154
Score = 53.6 bits (123), Expect = 4e-07
Identities = 26/72 (36%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Frame = +3
Query: 198 VPIKVLHEAEGHVVTCETNTGEVYRGKLIEAEDNMNCQMTLVTVTYRDG-RVAQLENVYI 374
+P+ +L A+ H + E GE Y G L+ + MN + V T +DG R ++ YI
Sbjct: 2 LPLSLLKTAQSHPMLVELKNGETYNGHLVSCDSWMNINLRDVICTSKDGDRFWRMPECYI 61
Query: 375 RGSKIRFLILPD 410
RGS I++L +PD
Sbjct: 62 RGSTIKYLRIPD 73
>AE014296-2169|AAF49893.1| 124|Drosophila melanogaster CG10753-PA
protein.
Length = 124
Score = 41.5 bits (93), Expect = 0.002
Identities = 22/71 (30%), Positives = 34/71 (47%)
Frame = +3
Query: 204 IKVLHEAEGHVVTCETNTGEVYRGKLIEAEDNMNCQMTLVTVTYRDGRVAQLENVYIRGS 383
++ L + VT E G G + + MN + V +T ++ LE + IRG+
Sbjct: 4 VRFLMKLSHETVTIELKNGTQIHGTITGVDVAMNTHLKSVRMTIKNRDPVHLETLSIRGN 63
Query: 384 KIRFLILPDML 416
IR+ ILPD L
Sbjct: 64 NIRYFILPDSL 74
>AY071359-1|AAL48981.1| 124|Drosophila melanogaster RE39488p
protein.
Length = 124
Score = 41.1 bits (92), Expect = 0.002
Identities = 22/71 (30%), Positives = 34/71 (47%)
Frame = +3
Query: 204 IKVLHEAEGHVVTCETNTGEVYRGKLIEAEDNMNCQMTLVTVTYRDGRVAQLENVYIRGS 383
++ L + VT E G G + + MN + V +T ++ LE + IRG+
Sbjct: 4 VRFLMKLSHETVTIELKNGTQIHGTITGVDVAMNTHLKSVRMTIKNRDHVHLETLSIRGN 63
Query: 384 KIRFLILPDML 416
IR+ ILPD L
Sbjct: 64 NIRYFILPDSL 74
>AE014298-1343|AAF46505.2| 3687|Drosophila melanogaster CG32702-PA
protein.
Length = 3687
Score = 31.5 bits (68), Expect = 1.8
Identities = 9/28 (32%), Positives = 21/28 (75%)
Frame = +3
Query: 186 MSIGVPIKVLHEAEGHVVTCETNTGEVY 269
+++ VP++++ E +GH +T +T+ G +Y
Sbjct: 1706 LTVSVPLQLVEEFQGHYMTMDTSCGSIY 1733
>BT021227-1|AAX33375.1| 124|Drosophila melanogaster RH43429p
protein.
Length = 124
Score = 30.3 bits (65), Expect = 4.2
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = +2
Query: 494 SCWSRTSRWKRWGPPWRLARWVR 562
S W R RW+RW WR +RW R
Sbjct: 26 SWWIRRIRWRRW---WRWSRWRR 45
>AB028139-1|BAA78208.1| 881|Drosophila melanogaster Gal4 protein.
Length = 881
Score = 29.5 bits (63), Expect = 7.4
Identities = 19/46 (41%), Positives = 25/46 (54%)
Frame = -3
Query: 457 VGLFPCLLNIGAFFNMSGNIKNLILEPRMYTFSSCATRPSLYVTVT 320
V L P L GA FN SGNI + L +TF++ + P+L T T
Sbjct: 757 VPLTPSALFGGANFNQSGNIADSSLS---FTFTNSSNGPNLITTQT 799
>AY075349-1|AAL68208.1| 1457|Drosophila melanogaster GH23785p
protein.
Length = 1457
Score = 29.1 bits (62), Expect = 9.8
Identities = 21/53 (39%), Positives = 26/53 (49%)
Frame = +3
Query: 312 MTLVTVTYRDGRVAQLENVYIRGSKIRFLILPDMLKNAPMFKRQGNKPTAGRG 470
MT TVTY DGR A N S+ I+PD +NA + KPT+ G
Sbjct: 554 MTGSTVTYADGRTASASN-----SRRPIRIVPDWTENAVQGEHYW-KPTSASG 600
>AE014298-1254|AAF46430.2| 1457|Drosophila melanogaster CG10966-PA,
isoform A protein.
Length = 1457
Score = 29.1 bits (62), Expect = 9.8
Identities = 21/53 (39%), Positives = 26/53 (49%)
Frame = +3
Query: 312 MTLVTVTYRDGRVAQLENVYIRGSKIRFLILPDMLKNAPMFKRQGNKPTAGRG 470
MT TVTY DGR A N S+ I+PD +NA + KPT+ G
Sbjct: 554 MTGSTVTYADGRTASASN-----SRRPIRIVPDWTENAVQGEHYW-KPTSASG 600
>AE014298-1253|ABI30971.1| 1475|Drosophila melanogaster CG10966-PB,
isoform B protein.
Length = 1475
Score = 29.1 bits (62), Expect = 9.8
Identities = 21/53 (39%), Positives = 26/53 (49%)
Frame = +3
Query: 312 MTLVTVTYRDGRVAQLENVYIRGSKIRFLILPDMLKNAPMFKRQGNKPTAGRG 470
MT TVTY DGR A N S+ I+PD +NA + KPT+ G
Sbjct: 554 MTGSTVTYADGRTASASN-----SRRPIRIVPDWTENAVQGEHYW-KPTSASG 600
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,835,163
Number of Sequences: 53049
Number of extensions: 495599
Number of successful extensions: 1318
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1275
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1309
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4935487923
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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