Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP16_F_H22
         (907 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_05_0995 - 29545058-29545204,29545988-29546074,29546166-295463...    88   8e-18
01_01_0128 - 1167904-1168749,1168790-1168863,1169419-1169491,117...    30   2.2  
01_06_1630 + 38753016-38753209,38753904-38754039,38754291-387544...    29   5.1  

>03_05_0995 -
           29545058-29545204,29545988-29546074,29546166-29546361,
           29546686-29546915
          Length = 219

 Score = 88.2 bits (209), Expect = 8e-18
 Identities = 60/203 (29%), Positives = 101/203 (49%)
 Frame = +1

Query: 160 LSFLEANAKEFDSVLKLYPQAIKLKAERKTKRPDELIKLDNWYQNELPKKIKSRGKDAHM 339
           + F   +A E+ + L  Y +  +L A  K   PD L+++D++Y+ +LP  ++ R  +  +
Sbjct: 5   VDFASGDAAEWRAALAAYDR--RLAALGK---PD-LVEVDSFYRRDLPDLLRRRDPEPFL 58

Query: 340 IHEELVQLMKWKQARGKFYPQLSYLIKVNTPRAVMQETKKAFRKLPNIESAMTALSNLKG 519
              ELV+L++WK +RGK+ P+L   +K      V   + KAF  LP++  A+T L+ LKG
Sbjct: 59  AKPELVRLLQWKLSRGKWRPRLMDFVKGLEDAVVESASCKAFAALPDLRKAITELTVLKG 118

Query: 520 VGXXXXXXXXXXXXPEIAPFMADECVQAIPENGRQRLHSKGIPQFRKPHTKRL**VKRGT 699
           VG            P++APFM+DE + A   N ++    + +    K  TK      +  
Sbjct: 119 VGPATASAVLAAYAPDVAPFMSDEAMVAALGNAKEYTLKQYLAFAEKLQTK-----SKEL 173

Query: 700 KRLRQEMVPHMVELALWTHNIVS 768
               +      VE ALW+  + S
Sbjct: 174 SSGEEVFTTSDVERALWSSAVAS 196


>01_01_0128 - 1167904-1168749,1168790-1168863,1169419-1169491,
            1171148-1171398,1171442-1171687,1172220-1172415,
            1172796-1172876,1172966-1173169,1173671-1173880,
            1173953-1174174,1174437-1174480,1174974-1175052,
            1175066-1175227,1175337-1175564,1175786-1175815,
            1175905-1176273,1176356-1176571,1177202-1177683,
            1177930-1177975
          Length = 1352

 Score = 30.3 bits (65), Expect = 2.2
 Identities = 13/42 (30%), Positives = 21/42 (50%)
 Frame = -2

Query: 759  VVRPEGQLYHVWNHFLPQPFCSSFNLSQTFRMWLTKLRYSLA 634
            V++  G L     H LPQP  +    +  F+MW  ++ Y L+
Sbjct: 987  VLQAHGDLQDTQVHHLPQPGAAGATEAVCFQMWTARVNYRLS 1028


>01_06_1630 +
           38753016-38753209,38753904-38754039,38754291-38754404,
           38755053-38755112,38755223-38755252,38755523-38756206
          Length = 405

 Score = 29.1 bits (62), Expect = 5.1
 Identities = 12/24 (50%), Positives = 14/24 (58%)
 Frame = -1

Query: 154 VSFVVAIVNVLNVQHCVFSLTTAP 83
           V FVV  V  L + HC+F L  AP
Sbjct: 375 VGFVVGFVGALYISHCLFFLRDAP 398


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,513,775
Number of Sequences: 37544
Number of extensions: 521791
Number of successful extensions: 1194
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1172
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1194
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2565528060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)