SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP16_F_H20
         (875 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-4074|AAF56671.1|  866|Drosophila melanogaster CG5882-PA...    37   0.032
AY052121-1|AAK93545.1| 1398|Drosophila melanogaster SD07366p pro...    36   0.055
AE014298-2167|AAF48467.2| 1208|Drosophila melanogaster CG33206-P...    36   0.055
AE014298-2166|AAF48466.2| 1398|Drosophila melanogaster CG33206-P...    36   0.055
DQ782382-1|ABG91087.1| 1066|Drosophila melanogaster microtubule ...    36   0.097
DQ782381-1|ABG91086.1| 1066|Drosophila melanogaster microtubule ...    36   0.097
U01842-1|AAA03718.1| 1066|Drosophila melanogaster kinesin-like p...    34   0.22 
AY069442-1|AAL39587.1| 1066|Drosophila melanogaster LD15641p pro...    34   0.22 
AE014296-198|AAF47458.2| 1066|Drosophila melanogaster CG9191-PA ...    34   0.22 
BT015313-1|AAT94541.1| 1220|Drosophila melanogaster AT02057p pro...    31   2.1  
AE014297-958|AAN13430.1| 1133|Drosophila melanogaster CG8176-PA,...    31   2.1  
X98082-1|CAA66706.1| 1332|Drosophila melanogaster RADHA protein ...    31   2.8  
X98081-2|CAA66705.1| 1332|Drosophila melanogaster RADHA protein ...    31   2.8  
AE014297-3789|AAF56461.1| 1332|Drosophila melanogaster CG11908-P...    31   2.8  
BT023917-1|ABB36421.1|  323|Drosophila melanogaster SD26182p pro...    30   4.8  
AF074334-1|AAC26868.1|  324|Drosophila melanogaster cyclin H hom...    30   4.8  
AF024618-1|AAB82275.1|  325|Drosophila melanogaster cyclin H pro...    30   4.8  
AE014296-3622|AAF51784.1|  324|Drosophila melanogaster CG7405-PA...    30   4.8  
AE014297-3559|AAF56305.1|  737|Drosophila melanogaster CG13617-P...    29   8.4  

>AE014297-4074|AAF56671.1|  866|Drosophila melanogaster CG5882-PA
           protein.
          Length = 866

 Score = 37.1 bits (82), Expect = 0.032
 Identities = 44/161 (27%), Positives = 75/161 (46%), Gaps = 13/161 (8%)
 Frame = +2

Query: 212 NKM-EITTNSEYSAE---KNSIKENFLLDMIKEVCSEQILXXXXXXXXXXXXQECNLEKY 379
           NK+ +IT + EY+ +   KN    N  ++++K V  ++++            QE    KY
Sbjct: 275 NKLAKITVDLEYTVQERDKNKRALNQRINLLK-VREDELIKVRQDNGKLAKSQEAIARKY 333

Query: 380 SSL----HKMSTADENTSTLLGVL-KHISTELTFEEQIELNEVFLQKIQNKLP-VLVTQL 541
           + L     ++ T +    T LG   K + +        E N   L K ++ L   L  + 
Sbjct: 334 AVLDEAKREVETLNIRLRTQLGTQDKELESMRRVVHHFEKNNENLTKERDSLRRELQAEH 393

Query: 542 EQLKLSRHTSNESKKEXIKALKESI---DTKLNKLNDQENE 655
            QL+ S     E++ E ++ALK++I   DTKL KLN+  N+
Sbjct: 394 HQLEQSNAQHQEAQHE-VRALKDTITTMDTKLKKLNEDANK 433


>AY052121-1|AAK93545.1| 1398|Drosophila melanogaster SD07366p protein.
          Length = 1398

 Score = 36.3 bits (80), Expect = 0.055
 Identities = 44/178 (24%), Positives = 85/178 (47%), Gaps = 13/178 (7%)
 Frame = +2

Query: 176  LIYIQVLAIKQKNKMEITTNSEYSAEKNSIKENFLLDMIKEVCSEQI-LXXXXXXXXXXX 352
            L+ +Q    +QK  ME+  N + +  K  + E    + + E C E++ +           
Sbjct: 765  LLQLQDKLEQQKELMEVDQNQQITIIKKELAET--TNQLSE-CQERLTVKEAQLAEIQQQ 821

Query: 353  XQECNLEKYSSLHKMSTADENT---STLLGVLKHISTELTF-EEQIELNEVFLQKIQNKL 520
             QE N E+     ++ T ++ +   S L    + +  +L   E+Q++LN+  L+K+Q  L
Sbjct: 822  LQEVNEERTRLQEQLLTKEQESGLDSELAKRNQELEDQLLAKEQQLQLNQAELEKLQETL 881

Query: 521  PV----LVTQLEQL--KLSRHTSNESKKEXIKALKES--IDTKLNKLNDQENEKVELM 670
             V    L+ + EQL  K S+  S ES+ +   A  ES  +   ++ L  ++NE ++++
Sbjct: 882  RVNEEQLLAKEEQLHAKESQLQSLESQLQGQLAADESQQLQQTIDGLGQEKNELIKVL 939


>AE014298-2167|AAF48467.2| 1208|Drosophila melanogaster CG33206-PB,
            isoform B protein.
          Length = 1208

 Score = 36.3 bits (80), Expect = 0.055
 Identities = 44/178 (24%), Positives = 85/178 (47%), Gaps = 13/178 (7%)
 Frame = +2

Query: 176  LIYIQVLAIKQKNKMEITTNSEYSAEKNSIKENFLLDMIKEVCSEQI-LXXXXXXXXXXX 352
            L+ +Q    +QK  ME+  N + +  K  + E    + + E C E++ +           
Sbjct: 575  LLQLQDKLEQQKELMEVDQNQQITIIKKELAET--TNQLSE-CQERLTVKEAQLAEIQQQ 631

Query: 353  XQECNLEKYSSLHKMSTADENT---STLLGVLKHISTELTF-EEQIELNEVFLQKIQNKL 520
             QE N E+     ++ T ++ +   S L    + +  +L   E+Q++LN+  L+K+Q  L
Sbjct: 632  LQEVNEERTRLQEQLLTKEQESGLDSELAKRNQELEDQLLAKEQQLQLNQAELEKLQETL 691

Query: 521  PV----LVTQLEQL--KLSRHTSNESKKEXIKALKES--IDTKLNKLNDQENEKVELM 670
             V    L+ + EQL  K S+  S ES+ +   A  ES  +   ++ L  ++NE ++++
Sbjct: 692  RVNEEQLLAKEEQLHAKESQLQSLESQLQGQLAADESQQLQQTIDGLGQEKNELIKVL 749


>AE014298-2166|AAF48466.2| 1398|Drosophila melanogaster CG33206-PA,
            isoform A protein.
          Length = 1398

 Score = 36.3 bits (80), Expect = 0.055
 Identities = 44/178 (24%), Positives = 85/178 (47%), Gaps = 13/178 (7%)
 Frame = +2

Query: 176  LIYIQVLAIKQKNKMEITTNSEYSAEKNSIKENFLLDMIKEVCSEQI-LXXXXXXXXXXX 352
            L+ +Q    +QK  ME+  N + +  K  + E    + + E C E++ +           
Sbjct: 765  LLQLQDKLEQQKELMEVDQNQQITIIKKELAET--TNQLSE-CQERLTVKEAQLAEIQQQ 821

Query: 353  XQECNLEKYSSLHKMSTADENT---STLLGVLKHISTELTF-EEQIELNEVFLQKIQNKL 520
             QE N E+     ++ T ++ +   S L    + +  +L   E+Q++LN+  L+K+Q  L
Sbjct: 822  LQEVNEERTRLQEQLLTKEQESGLDSELAKRNQELEDQLLAKEQQLQLNQAELEKLQETL 881

Query: 521  PV----LVTQLEQL--KLSRHTSNESKKEXIKALKES--IDTKLNKLNDQENEKVELM 670
             V    L+ + EQL  K S+  S ES+ +   A  ES  +   ++ L  ++NE ++++
Sbjct: 882  RVNEEQLLAKEEQLHAKESQLQSLESQLQGQLAADESQQLQQTIDGLGQEKNELIKVL 939


>DQ782382-1|ABG91087.1| 1066|Drosophila melanogaster microtubule
            dependent motor proteinprotein.
          Length = 1066

 Score = 35.5 bits (78), Expect = 0.097
 Identities = 33/160 (20%), Positives = 68/160 (42%), Gaps = 3/160 (1%)
 Frame = +2

Query: 188  QVLAIKQKNKMEITTNSEYSAEKNSIKENFLLDMIKEVCSEQILXXXXXXXXXXXXQECN 367
            Q  A+K++   E+  NS Y +++ ++  +  ++M+KEVC++ +                 
Sbjct: 559  QQAALKEQLSQEMV-NSSYVSQRLALNSSKSIEMLKEVCAQSLQDQTNLHNKLIGEVMKI 617

Query: 368  LEKYSSLHKMSTADENTSTLLGVLKHISTEL-TFEEQIELNEVFLQKIQNKLPVLVTQLE 544
             +++S        ++     L + K I T L   EE  + ++  L  +Q K   ++    
Sbjct: 618  SDQHSQAFVAKLMEQMQQQQLLMSKEIQTNLQVIEENNQRHKAMLDSMQEKFATIIDSSL 677

Query: 545  QLKLSRHTSNESKK-EXIKALKESIDTKLNKLNDQ-ENEK 658
            Q  +  H     KK E + A+      +L  L ++  NE+
Sbjct: 678  Q-SVEEHAKQMHKKLEQLGAMSLPDAEELQNLQEELANER 716


>DQ782381-1|ABG91086.1| 1066|Drosophila melanogaster microtubule
            dependent motor proteinprotein.
          Length = 1066

 Score = 35.5 bits (78), Expect = 0.097
 Identities = 33/160 (20%), Positives = 68/160 (42%), Gaps = 3/160 (1%)
 Frame = +2

Query: 188  QVLAIKQKNKMEITTNSEYSAEKNSIKENFLLDMIKEVCSEQILXXXXXXXXXXXXQECN 367
            Q  A+K++   E+  NS Y +++ ++  +  ++M+KEVC++ +                 
Sbjct: 559  QQAALKEQLSQEMV-NSSYVSQRLALNSSKSIEMLKEVCAQSLQDQTNLHNKLIGEVMKI 617

Query: 368  LEKYSSLHKMSTADENTSTLLGVLKHISTEL-TFEEQIELNEVFLQKIQNKLPVLVTQLE 544
             +++S        ++     L + K I T L   EE  + ++  L  +Q K   ++    
Sbjct: 618  SDQHSQAFVAKLMEQMQQQQLLMSKEIQTNLQVIEENNQRHKAMLDSMQEKFATIIDSSL 677

Query: 545  QLKLSRHTSNESKK-EXIKALKESIDTKLNKLNDQ-ENEK 658
            Q  +  H     KK E + A+      +L  L ++  NE+
Sbjct: 678  Q-SVEEHAKQMHKKLEQLGAMSLPDAEELQNLQEELANER 716


>U01842-1|AAA03718.1| 1066|Drosophila melanogaster kinesin-like
            protein protein.
          Length = 1066

 Score = 34.3 bits (75), Expect = 0.22
 Identities = 32/160 (20%), Positives = 68/160 (42%), Gaps = 3/160 (1%)
 Frame = +2

Query: 188  QVLAIKQKNKMEITTNSEYSAEKNSIKENFLLDMIKEVCSEQILXXXXXXXXXXXXQECN 367
            Q  A+K++   E+  NS Y +++ ++  +  ++M+KE+C++ +                 
Sbjct: 559  QQAALKEQLSQEMV-NSSYVSQRLALNSSKSIEMLKEMCAQSLQDQTNLHNKLIGEVMKI 617

Query: 368  LEKYSSLHKMSTADENTSTLLGVLKHISTEL-TFEEQIELNEVFLQKIQNKLPVLVTQLE 544
             +++S        ++     L + K I T L   EE  + ++  L  +Q K   ++    
Sbjct: 618  SDQHSQAFVAKLMEQMQQQQLLMSKEIQTNLQVIEENNQRHKAMLDSMQEKFATIIDSSL 677

Query: 545  QLKLSRHTSNESKK-EXIKALKESIDTKLNKLNDQ-ENEK 658
            Q  +  H     KK E + A+      +L  L ++  NE+
Sbjct: 678  Q-SVEEHAKQMHKKLEQLGAMSLPDAEELQNLQEELANER 716


>AY069442-1|AAL39587.1| 1066|Drosophila melanogaster LD15641p protein.
          Length = 1066

 Score = 34.3 bits (75), Expect = 0.22
 Identities = 32/160 (20%), Positives = 68/160 (42%), Gaps = 3/160 (1%)
 Frame = +2

Query: 188  QVLAIKQKNKMEITTNSEYSAEKNSIKENFLLDMIKEVCSEQILXXXXXXXXXXXXQECN 367
            Q  A+K++   E+  NS Y +++ ++  +  ++M+KE+C++ +                 
Sbjct: 559  QQAALKEQLSQEMV-NSSYVSQRLALNSSKSIEMLKEMCAQSLQDQTNLHNKLIGEVMKI 617

Query: 368  LEKYSSLHKMSTADENTSTLLGVLKHISTEL-TFEEQIELNEVFLQKIQNKLPVLVTQLE 544
             +++S        ++     L + K I T L   EE  + ++  L  +Q K   ++    
Sbjct: 618  SDQHSQAFVAKLMEQMQQQQLLMSKEIQTNLQVIEENNQRHKAMLDSMQEKFATIIDSSL 677

Query: 545  QLKLSRHTSNESKK-EXIKALKESIDTKLNKLNDQ-ENEK 658
            Q  +  H     KK E + A+      +L  L ++  NE+
Sbjct: 678  Q-SVEEHAKQMHKKLEQLGAMSLPDAEELQNLQEELANER 716


>AE014296-198|AAF47458.2| 1066|Drosophila melanogaster CG9191-PA
            protein.
          Length = 1066

 Score = 34.3 bits (75), Expect = 0.22
 Identities = 32/160 (20%), Positives = 68/160 (42%), Gaps = 3/160 (1%)
 Frame = +2

Query: 188  QVLAIKQKNKMEITTNSEYSAEKNSIKENFLLDMIKEVCSEQILXXXXXXXXXXXXQECN 367
            Q  A+K++   E+  NS Y +++ ++  +  ++M+KE+C++ +                 
Sbjct: 559  QQAALKEQLSQEMV-NSSYVSQRLALNSSKSIEMLKEMCAQSLQDQTNLHNKLIGEVMKI 617

Query: 368  LEKYSSLHKMSTADENTSTLLGVLKHISTEL-TFEEQIELNEVFLQKIQNKLPVLVTQLE 544
             +++S        ++     L + K I T L   EE  + ++  L  +Q K   ++    
Sbjct: 618  SDQHSQAFVAKLMEQMQQQQLLMSKEIQTNLQVIEENNQRHKAMLDSMQEKFATIIDSSL 677

Query: 545  QLKLSRHTSNESKK-EXIKALKESIDTKLNKLNDQ-ENEK 658
            Q  +  H     KK E + A+      +L  L ++  NE+
Sbjct: 678  Q-SVEEHAKQMHKKLEQLGAMSLPDAEELQNLQEELANER 716


>BT015313-1|AAT94541.1| 1220|Drosophila melanogaster AT02057p
           protein.
          Length = 1220

 Score = 31.1 bits (67), Expect = 2.1
 Identities = 24/86 (27%), Positives = 40/86 (46%), Gaps = 2/86 (2%)
 Frame = +2

Query: 404 ADENTSTLLGVLKHISTELTFEEQIELNEVFLQKIQNKLPVLVTQLEQLKLSR--HTSNE 577
           ADE       V +  S  L   + I+ + V +QK+++     V +LE+L+     H   E
Sbjct: 102 ADELHKKHKSVKEEESQTLECVQAIQTSTVAVQKLRDLYASKVQELEKLRKDNGSHKDAE 161

Query: 578 SKKEXIKALKESIDTKLNKLNDQENE 655
             +  +K L+E     L+K N  +NE
Sbjct: 162 KLESKLKKLQEEYKALLDKHNPIKNE 187


>AE014297-958|AAN13430.1| 1133|Drosophila melanogaster CG8176-PA,
           isoform A protein.
          Length = 1133

 Score = 31.1 bits (67), Expect = 2.1
 Identities = 24/86 (27%), Positives = 40/86 (46%), Gaps = 2/86 (2%)
 Frame = +2

Query: 404 ADENTSTLLGVLKHISTELTFEEQIELNEVFLQKIQNKLPVLVTQLEQLKLSR--HTSNE 577
           ADE       V +  S  L   + I+ + V +QK+++     V +LE+L+     H   E
Sbjct: 102 ADELHKKHKSVKEEESQTLECVQAIQTSTVAVQKLRDLYASKVQELEKLRKDNGSHKDAE 161

Query: 578 SKKEXIKALKESIDTKLNKLNDQENE 655
             +  +K L+E     L+K N  +NE
Sbjct: 162 KLESKLKKLQEEYKALLDKHNPIKNE 187


>X98082-1|CAA66706.1| 1332|Drosophila melanogaster RADHA protein
           protein.
          Length = 1332

 Score = 30.7 bits (66), Expect = 2.8
 Identities = 35/144 (24%), Positives = 61/144 (42%)
 Frame = +2

Query: 209 KNKMEITTNSEYSAEKNSIKENFLLDMIKEVCSEQILXXXXXXXXXXXXQECNLEKYSSL 388
           +N  E+T+   +  E+   ++   L+ IK   SE +L            ++ +LE     
Sbjct: 500 QNVDELTSLDLFELEEKRQEKIAELERIKAGQSESLLQTELKVKKH---KKADLELQGKK 556

Query: 389 HKMSTADENTSTLLGVLKHISTELTFEEQIELNEVFLQKIQNKLPVLVTQLEQLKLSRHT 568
            ++ T +E     L   K +S       Q ELN V   KIQ  LP+L  Q +  ++ +  
Sbjct: 557 SQLETINEVPPKSLRKSKPVS-------QSELNNV--PKIQENLPILNNQTKGSRIQKEN 607

Query: 569 SNESKKEXIKALKESIDTKLNKLN 640
             E+ ++   AL E   +   KL+
Sbjct: 608 CEENNEDLSYALSEEHSSSNEKLD 631


>X98081-2|CAA66705.1| 1332|Drosophila melanogaster RADHA protein
           protein.
          Length = 1332

 Score = 30.7 bits (66), Expect = 2.8
 Identities = 35/144 (24%), Positives = 61/144 (42%)
 Frame = +2

Query: 209 KNKMEITTNSEYSAEKNSIKENFLLDMIKEVCSEQILXXXXXXXXXXXXQECNLEKYSSL 388
           +N  E+T+   +  E+   ++   L+ IK   SE +L            ++ +LE     
Sbjct: 500 QNVDELTSLDLFELEEKRQEKIAELERIKAGQSESLLQTELKVKKH---KKADLELQGKK 556

Query: 389 HKMSTADENTSTLLGVLKHISTELTFEEQIELNEVFLQKIQNKLPVLVTQLEQLKLSRHT 568
            ++ T +E     L   K +S       Q ELN V   KIQ  LP+L  Q +  ++ +  
Sbjct: 557 SQLETINEVPPKSLRKSKPVS-------QSELNNV--PKIQENLPILNNQTKGSRIQKEN 607

Query: 569 SNESKKEXIKALKESIDTKLNKLN 640
             E+ ++   AL E   +   KL+
Sbjct: 608 CEENNEDLSYALSEEHSSSNEKLD 631


>AE014297-3789|AAF56461.1| 1332|Drosophila melanogaster CG11908-PA
           protein.
          Length = 1332

 Score = 30.7 bits (66), Expect = 2.8
 Identities = 35/144 (24%), Positives = 61/144 (42%)
 Frame = +2

Query: 209 KNKMEITTNSEYSAEKNSIKENFLLDMIKEVCSEQILXXXXXXXXXXXXQECNLEKYSSL 388
           +N  E+T+   +  E+   ++   L+ IK   SE +L            ++ +LE     
Sbjct: 500 QNVDELTSLDLFELEEKRQEKIAELERIKAGQSESLLQTELKVKKH---KKADLELQGKK 556

Query: 389 HKMSTADENTSTLLGVLKHISTELTFEEQIELNEVFLQKIQNKLPVLVTQLEQLKLSRHT 568
            ++ T +E     L   K +S       Q ELN V   KIQ  LP+L  Q +  ++ +  
Sbjct: 557 SQLETINEVPPKSLRKSKPVS-------QSELNNV--PKIQENLPILNNQTKGSRIQKEN 607

Query: 569 SNESKKEXIKALKESIDTKLNKLN 640
             E+ ++   AL E   +   KL+
Sbjct: 608 CEENNEDLSYALSEEHSSSNEKLD 631


>BT023917-1|ABB36421.1|  323|Drosophila melanogaster SD26182p
           protein.
          Length = 323

 Score = 29.9 bits (64), Expect = 4.8
 Identities = 11/58 (18%), Positives = 32/58 (55%)
 Frame = +2

Query: 482 LNEVFLQKIQNKLPVLVTQLEQLKLSRHTSNESKKEXIKALKESIDTKLNKLNDQENE 655
           + ++     + KLP L+  + ++++      +  +E +KA+++ +D   N+ N+ ++E
Sbjct: 227 VTDLLFVSAREKLPGLIDAVRKIRIMVKQYQQPDREKVKAIEKKLDKCRNQANNPDSE 284


>AF074334-1|AAC26868.1|  324|Drosophila melanogaster cyclin H
           homolog protein.
          Length = 324

 Score = 29.9 bits (64), Expect = 4.8
 Identities = 11/58 (18%), Positives = 32/58 (55%)
 Frame = +2

Query: 482 LNEVFLQKIQNKLPVLVTQLEQLKLSRHTSNESKKEXIKALKESIDTKLNKLNDQENE 655
           + ++     + KLP L+  + ++++      +  +E +KA+++ +D   N+ N+ ++E
Sbjct: 228 VTDLLFVSAREKLPGLIDAVRKIRIMVKQYQQPDREKVKAIEKKLDKCRNQANNPDSE 285


>AF024618-1|AAB82275.1|  325|Drosophila melanogaster cyclin H
           protein.
          Length = 325

 Score = 29.9 bits (64), Expect = 4.8
 Identities = 11/58 (18%), Positives = 32/58 (55%)
 Frame = +2

Query: 482 LNEVFLQKIQNKLPVLVTQLEQLKLSRHTSNESKKEXIKALKESIDTKLNKLNDQENE 655
           + ++     + KLP L+  + ++++      +  +E +KA+++ +D   N+ N+ ++E
Sbjct: 229 VTDLLFVSAREKLPGLIDAVRKIRIMVKQYQQPDREKVKAIEKKLDKCRNQANNPDSE 286


>AE014296-3622|AAF51784.1|  324|Drosophila melanogaster CG7405-PA
           protein.
          Length = 324

 Score = 29.9 bits (64), Expect = 4.8
 Identities = 11/58 (18%), Positives = 32/58 (55%)
 Frame = +2

Query: 482 LNEVFLQKIQNKLPVLVTQLEQLKLSRHTSNESKKEXIKALKESIDTKLNKLNDQENE 655
           + ++     + KLP L+  + ++++      +  +E +KA+++ +D   N+ N+ ++E
Sbjct: 228 VTDLLFVSAREKLPGLIDAVRKIRIMVKQYQQPDREKVKAIEKKLDKCRNQANNPDSE 285


>AE014297-3559|AAF56305.1|  737|Drosophila melanogaster CG13617-PA
           protein.
          Length = 737

 Score = 29.1 bits (62), Expect = 8.4
 Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
 Frame = +2

Query: 392 KMSTADENTSTLLGVLKHISTELTFEEQI-ELNEVFLQKIQNKLPVLVTQLEQLK 553
           + S A E    L G+ + +S    ++ Q+ + NE F+Q I  +L  L   LEQ K
Sbjct: 256 RQSEASERKEQLTGLAERLSNFEEWQTQLKQSNEQFIQDINKRLEGLSHALEQSK 310


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,325,928
Number of Sequences: 53049
Number of extensions: 384659
Number of successful extensions: 1187
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1114
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1185
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4250176164
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -