Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP16_F_H20
(875 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF016671-1|AAF02173.1| 621|Caenorhabditis elegans Hypothetical ... 31 1.4
Z66513-9|CAH19083.1| 561|Caenorhabditis elegans Hypothetical pr... 29 3.3
Z66513-8|CAA91340.2| 563|Caenorhabditis elegans Hypothetical pr... 29 3.3
Z68227-7|CAA92520.1| 305|Caenorhabditis elegans Hypothetical pr... 29 4.4
Z68159-6|CAA92287.5| 485|Caenorhabditis elegans Hypothetical pr... 29 4.4
Z22176-13|CAO82058.1| 1185|Caenorhabditis elegans Hypothetical p... 28 7.6
Z22176-10|CAD45611.1| 1157|Caenorhabditis elegans Hypothetical p... 28 7.6
Z22176-9|CAA80140.1| 1139|Caenorhabditis elegans Hypothetical pr... 28 7.6
AF424978-1|AAL23934.1| 1157|Caenorhabditis elegans UNC-16 protein. 28 7.6
>AF016671-1|AAF02173.1| 621|Caenorhabditis elegans Hypothetical
protein W09G10.6 protein.
Length = 621
Score = 30.7 bits (66), Expect = 1.4
Identities = 26/97 (26%), Positives = 44/97 (45%), Gaps = 1/97 (1%)
Frame = +2
Query: 395 MSTADENTSTLLGVLKHISTELTFEEQIELNEVFLQKIQNKLPVLVTQLEQL-KLSRHTS 571
++T ++N T I++ L E ++ ++Q V + Q + L L +S
Sbjct: 301 VTTDEKNQKTGFSQNHLINSSLAVSELNNNGKLSGTEVQET--VEINQRKDLGNLRDQSS 358
Query: 572 NESKKEXIKALKESIDTKLNKLNDQENEKVELMMGVA 682
K E +AL+ S+D K L DQ+ +L GVA
Sbjct: 359 KNLKLEGSEALRSSVDLKKRSLEDQKLSSKDLKTGVA 395
>Z66513-9|CAH19083.1| 561|Caenorhabditis elegans Hypothetical
protein F54D5.15c protein.
Length = 561
Score = 29.5 bits (63), Expect = 3.3
Identities = 13/27 (48%), Positives = 19/27 (70%)
Frame = +2
Query: 371 EKYSSLHKMSTADENTSTLLGVLKHIS 451
E YSSL K+ T D+ TS+ L + KH++
Sbjct: 47 EIYSSLKKVRTTDDLTSSQLSIDKHVT 73
>Z66513-8|CAA91340.2| 563|Caenorhabditis elegans Hypothetical
protein F54D5.15a protein.
Length = 563
Score = 29.5 bits (63), Expect = 3.3
Identities = 13/27 (48%), Positives = 19/27 (70%)
Frame = +2
Query: 371 EKYSSLHKMSTADENTSTLLGVLKHIS 451
E YSSL K+ T D+ TS+ L + KH++
Sbjct: 49 EIYSSLKKVRTTDDLTSSQLSIDKHVT 75
>Z68227-7|CAA92520.1| 305|Caenorhabditis elegans Hypothetical
protein F49C12.9 protein.
Length = 305
Score = 29.1 bits (62), Expect = 4.4
Identities = 17/43 (39%), Positives = 21/43 (48%)
Frame = +2
Query: 482 LNEVFLQKIQNKLPVLVTQLEQLKLSRHTSNESKKEXIKALKE 610
LNE L+KI + + V L LK + H E K ALKE
Sbjct: 55 LNEESLKKITDADSIRVVLLPPLKTNNHIEEEQKNRISIALKE 97
>Z68159-6|CAA92287.5| 485|Caenorhabditis elegans Hypothetical
protein C33D9.6 protein.
Length = 485
Score = 29.1 bits (62), Expect = 4.4
Identities = 25/100 (25%), Positives = 47/100 (47%)
Frame = +2
Query: 365 NLEKYSSLHKMSTADENTSTLLGVLKHISTELTFEEQIELNEVFLQKIQNKLPVLVTQLE 544
NL+K+ +++ + E L LKH + ++ +E N++ L + NK+ + E
Sbjct: 109 NLQKWRLRDELTKSIEQEEKLKAELKHANDQINMI--VEHNKLELDAL-NKINLEAKAQE 165
Query: 545 QLKLSRHTSNESKKEXIKALKESIDTKLNKLNDQENEKVE 664
K+ K ++ L+ ++TK KLND E + E
Sbjct: 166 --KIQEEIIQRCMKR-VEDLESILETKEQKLNDFEEREYE 202
>Z22176-13|CAO82058.1| 1185|Caenorhabditis elegans Hypothetical
protein ZK1098.10d protein.
Length = 1185
Score = 28.3 bits (60), Expect = 7.6
Identities = 16/42 (38%), Positives = 22/42 (52%)
Frame = +2
Query: 539 LEQLKLSRHTSNESKKEXIKALKESIDTKLNKLNDQENEKVE 664
L LSR +E +E I +E I T KL ++ENE+ E
Sbjct: 374 LRDENLSRQMVSEKMQEQITKHEEEIKTLKQKLMEKENEQEE 415
>Z22176-10|CAD45611.1| 1157|Caenorhabditis elegans Hypothetical
protein ZK1098.10b protein.
Length = 1157
Score = 28.3 bits (60), Expect = 7.6
Identities = 16/42 (38%), Positives = 22/42 (52%)
Frame = +2
Query: 539 LEQLKLSRHTSNESKKEXIKALKESIDTKLNKLNDQENEKVE 664
L LSR +E +E I +E I T KL ++ENE+ E
Sbjct: 374 LRDENLSRQMVSEKMQEQITKHEEEIKTLKQKLMEKENEQEE 415
>Z22176-9|CAA80140.1| 1139|Caenorhabditis elegans Hypothetical
protein ZK1098.10a protein.
Length = 1139
Score = 28.3 bits (60), Expect = 7.6
Identities = 16/42 (38%), Positives = 22/42 (52%)
Frame = +2
Query: 539 LEQLKLSRHTSNESKKEXIKALKESIDTKLNKLNDQENEKVE 664
L LSR +E +E I +E I T KL ++ENE+ E
Sbjct: 356 LRDENLSRQMVSEKMQEQITKHEEEIKTLKQKLMEKENEQEE 397
>AF424978-1|AAL23934.1| 1157|Caenorhabditis elegans UNC-16 protein.
Length = 1157
Score = 28.3 bits (60), Expect = 7.6
Identities = 16/42 (38%), Positives = 22/42 (52%)
Frame = +2
Query: 539 LEQLKLSRHTSNESKKEXIKALKESIDTKLNKLNDQENEKVE 664
L LSR +E +E I +E I T KL ++ENE+ E
Sbjct: 374 LRDENLSRQMVSEKMQEQITKHEEEIKTLKQKLMEKENEQEE 415
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,776,159
Number of Sequences: 27780
Number of extensions: 227627
Number of successful extensions: 646
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 594
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 643
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2202903780
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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