Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP16_F_H19
(933 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 36 0.011
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 36 0.011
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 33 0.044
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 30 0.41
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 30 0.54
SPAC26A3.16 |dph1|ucp5|UBA domain protein Dph1|Schizosaccharomyc... 29 1.2
SPAC29B12.07 |sec16||multidomain vesicle coat component Sec16|Sc... 28 1.6
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 27 3.8
SPBC543.02c |||DNAJ/TPR domain protein DNAJC7 family|Schizosacch... 27 5.0
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 35.5 bits (78), Expect = 0.011
Identities = 18/35 (51%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Frame = -1
Query: 912 GGGGXPPXGXXGG-GXXXGXPXGGGAGLGXXGGXP 811
GG G P G GG G G P G G GLG GG P
Sbjct: 224 GGFGGGPGGFEGGPGGFGGGPGGFGGGLGGFGGGP 258
Score = 31.9 bits (69), Expect = 0.13
Identities = 19/45 (42%), Positives = 19/45 (42%), Gaps = 1/45 (2%)
Frame = -3
Query: 703 GGGGE*SXXPPEXXXXXGSFXGXGGXGAFXNHXXGPGGG-GXFXG 572
GG G S PP G F G GG G G GGG G F G
Sbjct: 191 GGFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEG 235
Score = 30.3 bits (65), Expect = 0.41
Identities = 16/33 (48%), Positives = 16/33 (48%), Gaps = 1/33 (3%)
Frame = -1
Query: 912 GGGGXPPXGXXGG-GXXXGXPXGGGAGLGXXGG 817
GG G P G GG G G P G G G G GG
Sbjct: 238 GGFGGGPGGFGGGLGGFGGGPGGFGGGPGGHGG 270
Score = 26.6 bits (56), Expect = 5.0
Identities = 15/36 (41%), Positives = 15/36 (41%), Gaps = 2/36 (5%)
Frame = -1
Query: 912 GGGGXPPXGXXGGGXXXGXPXGG--GAGLGXXGGXP 811
GG G PP G G G G G G G GG P
Sbjct: 195 GGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGP 230
Score = 26.6 bits (56), Expect = 5.0
Identities = 19/54 (35%), Positives = 19/54 (35%), Gaps = 1/54 (1%)
Frame = -3
Query: 730 GGGXTXXPPGGGGE*SXXPPEXXXXXGSFXGXGGXGAFXNHXXGPGGG-GXFXG 572
G G PGG G E G GG G F G GGG G F G
Sbjct: 196 GSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGGFGG 249
Score = 26.2 bits (55), Expect = 6.6
Identities = 15/35 (42%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
Frame = -1
Query: 912 GGGGXPPXGXXGGGXXXGXPXGG-GAGLGXXGGXP 811
GG P G GG G GG G G G GG P
Sbjct: 231 GGFEGGPGGFGGGPGGFGGGLGGFGGGPGGFGGGP 265
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 35.5 bits (78), Expect = 0.011
Identities = 16/35 (45%), Positives = 16/35 (45%), Gaps = 3/35 (8%)
Frame = +2
Query: 818 PPXXPNPAPPP---XGXPXKXPPPXXPXGGXPPPP 913
P P P PPP G P PPP G PPPP
Sbjct: 744 PAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPP 778
Score = 35.5 bits (78), Expect = 0.011
Identities = 15/32 (46%), Positives = 15/32 (46%)
Frame = +2
Query: 818 PPXXPNPAPPPXGXPXKXPPPXXPXGGXPPPP 913
P P PAP G P PPP G PPPP
Sbjct: 748 PIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPP 779
Score = 33.5 bits (73), Expect = 0.044
Identities = 16/34 (47%), Positives = 16/34 (47%), Gaps = 3/34 (8%)
Frame = +2
Query: 821 PXXPNPA---PPPXGXPXKXPPPXXPXGGXPPPP 913
P P PA P P P PPP GG PPPP
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPP 765
Score = 29.1 bits (62), Expect = 0.94
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = +2
Query: 830 PNPAPPPXGXPXKXPPPXXPXGGXPPP 910
P P PPP G PPP P PPP
Sbjct: 761 PPPPPPPPGVAGAGPPPPPP----PPP 783
Score = 26.6 bits (56), Expect = 5.0
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +1
Query: 586 PPPRGXXGGX*MPPXPPP 639
PPP G G PP PPP
Sbjct: 765 PPPPGVAGAGPPPPPPPP 782
Score = 25.8 bits (54), Expect = 8.7
Identities = 11/29 (37%), Positives = 11/29 (37%)
Frame = +2
Query: 812 GXPPXXPNPAPPPXGXPXKXPPPXXPXGG 898
G PP P P G P PPP G
Sbjct: 760 GPPPPPPPPGVAGAGPPPPPPPPPAVSAG 788
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 33.5 bits (73), Expect = 0.044
Identities = 14/27 (51%), Positives = 14/27 (51%), Gaps = 1/27 (3%)
Frame = +2
Query: 818 PPXXPNPAPPPXG-XPXKXPPPXXPXG 895
PP P P PPP G P PPP P G
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPPPG 31
Score = 27.5 bits (58), Expect = 2.9
Identities = 10/23 (43%), Positives = 10/23 (43%)
Frame = +2
Query: 845 PPXGXPXKXPPPXXPXGGXPPPP 913
PP P PPP PPPP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPP 27
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 30.3 bits (65), Expect = 0.41
Identities = 13/30 (43%), Positives = 13/30 (43%), Gaps = 2/30 (6%)
Frame = +2
Query: 830 PNPAPPPXGXPXKXPPPXXPXG--GXPPPP 913
P P PPP P P P G PPPP
Sbjct: 1705 PTPPPPPMSVPPPPSAPPMPAGPPSAPPPP 1734
Score = 27.9 bits (59), Expect = 2.2
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = +2
Query: 818 PPXXPNPAPPPXGXPXKXPPPXXPXGGXPPPP 913
PP P APP P PPP P P P
Sbjct: 1715 PP--PPSAPPMPAGPPSAPPPPLPASSAPSVP 1744
Score = 27.5 bits (58), Expect = 2.9
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = +2
Query: 818 PPXXPNPAPPPXGXPXKXPPPXXPXGGXPPPP 913
PP P A PP P P P PPPP
Sbjct: 1690 PPVRPQSAAPP---QMSAPTPPPPPMSVPPPP 1718
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 29.9 bits (64), Expect = 0.54
Identities = 16/36 (44%), Positives = 17/36 (47%), Gaps = 2/36 (5%)
Frame = +2
Query: 812 GXPPXXPNPAP--PPXGXPXKXPPPXXPXGGXPPPP 913
G PP P PA PP P + PP P G PP P
Sbjct: 1177 GIPPV-PKPAAGVPPVPPPSEAPPVPKPSVGVPPVP 1211
Score = 29.9 bits (64), Expect = 0.54
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = +2
Query: 812 GXPPXXPNPAPPPXGXPXKXPPPXXPXGGXPPPP 913
G PP P PP P PP P PP P
Sbjct: 1187 GVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVP 1220
Score = 28.7 bits (61), Expect = 1.2
Identities = 12/32 (37%), Positives = 13/32 (40%)
Frame = +2
Query: 818 PPXXPNPAPPPXGXPXKXPPPXXPXGGXPPPP 913
P P+ PP P PP P G PP P
Sbjct: 1199 PVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVP 1230
Score = 28.3 bits (60), Expect = 1.6
Identities = 14/35 (40%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
Frame = +2
Query: 812 GXPPXX-PNPAPPPXGXPXKXPPPXXPXGGXPPPP 913
G PP P+ A PP P PP G PP P
Sbjct: 1090 GIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVP 1124
Score = 27.9 bits (59), Expect = 2.2
Identities = 14/35 (40%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
Frame = +2
Query: 812 GXPPXX-PNPAPPPXGXPXKXPPPXXPXGGXPPPP 913
G PP P+ A PP P PP P PP P
Sbjct: 1119 GAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVP 1153
Score = 27.9 bits (59), Expect = 2.2
Identities = 14/35 (40%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
Frame = +2
Query: 812 GXPPXX-PNPAPPPXGXPXKXPPPXXPXGGXPPPP 913
G PP P+ A PP P PP P PP P
Sbjct: 1138 GAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVP 1172
Score = 27.9 bits (59), Expect = 2.2
Identities = 15/36 (41%), Positives = 16/36 (44%), Gaps = 2/36 (5%)
Frame = +2
Query: 812 GXPPXX-PNPAPPPXGXPXKX-PPPXXPXGGXPPPP 913
G PP P+ A PP P PP P G PP P
Sbjct: 1157 GAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVP 1192
Score = 27.1 bits (57), Expect = 3.8
Identities = 12/32 (37%), Positives = 13/32 (40%)
Frame = +2
Query: 818 PPXXPNPAPPPXGXPXKXPPPXXPXGGXPPPP 913
P P+ APP PP P G PP P
Sbjct: 1151 PVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVP 1182
Score = 26.2 bits (55), Expect = 6.6
Identities = 12/32 (37%), Positives = 13/32 (40%)
Frame = +2
Query: 818 PPXXPNPAPPPXGXPXKXPPPXXPXGGXPPPP 913
P P+ A PP P PP P PP P
Sbjct: 1103 PVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVP 1134
Score = 26.2 bits (55), Expect = 6.6
Identities = 13/35 (37%), Positives = 13/35 (37%), Gaps = 1/35 (2%)
Frame = +2
Query: 812 GXPPXXPNPAPPPXGXPXK-XPPPXXPXGGXPPPP 913
G PP P PP P PP P PP P
Sbjct: 1206 GVPPVPPPSTAPPVPTPSAGLPPVPVPTAKAPPVP 1240
>SPAC26A3.16 |dph1|ucp5|UBA domain protein Dph1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 354
Score = 28.7 bits (61), Expect = 1.2
Identities = 15/33 (45%), Positives = 15/33 (45%), Gaps = 1/33 (3%)
Frame = -1
Query: 912 GGGGXPPXGXXGGGXXXGXPXG-GGAGLGXXGG 817
G G P GGG G GGAGLG GG
Sbjct: 214 GAAGIDPMSLMGGGLGGAGLGGLGGAGLGGFGG 246
>SPAC29B12.07 |sec16||multidomain vesicle coat component
Sec16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1995
Score = 28.3 bits (60), Expect = 1.6
Identities = 12/28 (42%), Positives = 12/28 (42%), Gaps = 2/28 (7%)
Frame = +2
Query: 836 PAPPPXGXPXKXPPPXXPXGGXPP--PP 913
P PPP P PP P PP PP
Sbjct: 1883 PPPPPMALPKAGPPSAAPTSALPPAGPP 1910
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 27.1 bits (57), Expect = 3.8
Identities = 18/56 (32%), Positives = 18/56 (32%), Gaps = 1/56 (1%)
Frame = +1
Query: 496 KKXXXPPPPXXXFFXGXXG-GGGXSPHXKKXPPPRGXXGGX*MPPXPPPQXKXPXP 660
KK PPPP G G G S PPP P PP P P
Sbjct: 308 KKRPPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPP 363
Score = 27.1 bits (57), Expect = 3.8
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = +2
Query: 818 PPXXPNPAPPPXGXPXKXPPPXXPXGGXPPP 910
PP P P P G P PP P PPP
Sbjct: 450 PPSAPIAPPLPAGMP--AAPPLPPAAPAPPP 478
Score = 26.6 bits (56), Expect = 5.0
Identities = 16/38 (42%), Positives = 17/38 (44%), Gaps = 3/38 (7%)
Frame = +2
Query: 818 PPXXPNPAPP--PXGXPXKXP-PPXXPXGGXPPPPXNL 922
PP P APP P G P P PP P PP P +
Sbjct: 428 PPSLPPSAPPSLPMGAPAAPPLPPSAPIA--PPLPAGM 463
>SPBC543.02c |||DNAJ/TPR domain protein DNAJC7
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 476
Score = 26.6 bits (56), Expect = 5.0
Identities = 14/33 (42%), Positives = 15/33 (45%)
Frame = -1
Query: 909 GGGXPPXGXXGGGXXXGXPXGGGAGLGXXGGXP 811
GG P G GGG G G G+G GG P
Sbjct: 438 GGSFPGGGFPGGGFPGGSYNSQGFGMG--GGFP 468
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,125,838
Number of Sequences: 5004
Number of extensions: 33734
Number of successful extensions: 196
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 150
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 473333082
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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