Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP16_F_H18
(887 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC127679-1|AAI27680.1| 202|Homo sapiens hypothetical protein MG... 83 2e-15
BC094837-1|AAH94837.1| 201|Homo sapiens MGC3196 protein protein. 83 2e-15
BC042801-1|AAH42801.1| 188|Homo sapiens MGC3196 protein protein. 83 2e-15
BC020914-1|AAH20914.1| 206|Homo sapiens Similar to RIKEN cDNA 0... 83 2e-15
BC008643-1|AAH08643.1| 201|Homo sapiens Similar to RIKEN cDNA 0... 83 2e-15
X69943-1|CAA49561.1| 100|Homo sapiens GTP binding protein protein. 32 3.2
AM746210-1|CAN88919.1| 302|Homo sapiens PDHA1/LOC79064 protein ... 31 4.2
>BC127679-1|AAI27680.1| 202|Homo sapiens hypothetical protein
MGC3196 protein.
Length = 202
Score = 82.6 bits (195), Expect = 2e-15
Identities = 41/96 (42%), Positives = 57/96 (59%)
Frame = +2
Query: 482 AVIIGAGSLTMIWMYTLRSVRYLVLHKGGKHVSLVTYAPFGRNRSMKVPIEDICCQERRT 661
A+++GAG L ++LRSVR +VL GG+ V+L T+APFG VP++ + C R
Sbjct: 107 ALVLGAGLL-----FSLRSVRSVVLRAGGQQVTLTTHAPFGLGAHFTVPLKQVSCMAHRG 161
Query: 662 VAKVQLPLKVRNRMMHYMLDMRGEFKNPLLFDCTAG 769
LPLKV+ R +++LD G F N LFD T G
Sbjct: 162 EVPAMLPLKVKGRRFYFLLDKTGHFPNTKLFDNTVG 197
Score = 31.5 bits (68), Expect = 4.2
Identities = 11/41 (26%), Positives = 23/41 (56%)
Frame = +3
Query: 249 TNVAKDVILFKYENPSFYKYMNIFAVVQYAFWMYLGIFSFS 371
T + +DV+LF+++ F+ + +F Q FW + + + S
Sbjct: 28 TTLQRDVLLFEHDRGRFFTILGLFCAGQGVFWASMAVAAVS 68
>BC094837-1|AAH94837.1| 201|Homo sapiens MGC3196 protein protein.
Length = 201
Score = 82.6 bits (195), Expect = 2e-15
Identities = 41/96 (42%), Positives = 57/96 (59%)
Frame = +2
Query: 482 AVIIGAGSLTMIWMYTLRSVRYLVLHKGGKHVSLVTYAPFGRNRSMKVPIEDICCQERRT 661
A+++GAG L ++LRSVR +VL GG+ V+L T+APFG VP++ + C R
Sbjct: 106 ALVLGAGLL-----FSLRSVRSVVLRAGGQQVTLTTHAPFGLGAHFTVPLKQVSCMAHRG 160
Query: 662 VAKVQLPLKVRNRMMHYMLDMRGEFKNPLLFDCTAG 769
LPLKV+ R +++LD G F N LFD T G
Sbjct: 161 EVPAMLPLKVKGRRFYFLLDKTGHFPNTKLFDNTVG 196
Score = 31.5 bits (68), Expect = 4.2
Identities = 11/41 (26%), Positives = 23/41 (56%)
Frame = +3
Query: 249 TNVAKDVILFKYENPSFYKYMNIFAVVQYAFWMYLGIFSFS 371
T + +DV+LF+++ F+ + +F Q FW + + + S
Sbjct: 27 TTLQRDVLLFEHDRGRFFTILGLFCAGQGVFWASMAVAAVS 67
>BC042801-1|AAH42801.1| 188|Homo sapiens MGC3196 protein protein.
Length = 188
Score = 82.6 bits (195), Expect = 2e-15
Identities = 41/96 (42%), Positives = 57/96 (59%)
Frame = +2
Query: 482 AVIIGAGSLTMIWMYTLRSVRYLVLHKGGKHVSLVTYAPFGRNRSMKVPIEDICCQERRT 661
A+++GAG L ++LRSVR +VL GG+ V+L T+APFG VP++ + C R
Sbjct: 93 ALVLGAGLL-----FSLRSVRSVVLRAGGQQVTLTTHAPFGLGAHFTVPLKQVSCMAHRG 147
Query: 662 VAKVQLPLKVRNRMMHYMLDMRGEFKNPLLFDCTAG 769
LPLKV+ R +++LD G F N LFD T G
Sbjct: 148 EVPAMLPLKVKGRSFYFLLDKTGHFPNTKLFDNTVG 183
>BC020914-1|AAH20914.1| 206|Homo sapiens Similar to RIKEN cDNA
0610006I08 gene protein.
Length = 206
Score = 82.6 bits (195), Expect = 2e-15
Identities = 41/96 (42%), Positives = 57/96 (59%)
Frame = +2
Query: 482 AVIIGAGSLTMIWMYTLRSVRYLVLHKGGKHVSLVTYAPFGRNRSMKVPIEDICCQERRT 661
A+++GAG L ++LRSVR +VL GG+ V+L T+APFG VP++ + C R
Sbjct: 111 ALVLGAGLL-----FSLRSVRSVVLRAGGQQVTLTTHAPFGLGAHFTVPLKQVSCMAHRG 165
Query: 662 VAKVQLPLKVRNRMMHYMLDMRGEFKNPLLFDCTAG 769
LPLKV+ R +++LD G F N LFD T G
Sbjct: 166 EVPAMLPLKVKGRRFYFLLDKTGHFPNTKLFDNTVG 201
Score = 31.5 bits (68), Expect = 4.2
Identities = 11/41 (26%), Positives = 23/41 (56%)
Frame = +3
Query: 249 TNVAKDVILFKYENPSFYKYMNIFAVVQYAFWMYLGIFSFS 371
T + +DV+LF+++ F+ + +F Q FW + + + S
Sbjct: 32 TTLQRDVLLFEHDRGRFFTILGLFCAGQGVFWASMAVAAVS 72
>BC008643-1|AAH08643.1| 201|Homo sapiens Similar to RIKEN cDNA
0610006I08 gene protein.
Length = 201
Score = 82.6 bits (195), Expect = 2e-15
Identities = 41/96 (42%), Positives = 57/96 (59%)
Frame = +2
Query: 482 AVIIGAGSLTMIWMYTLRSVRYLVLHKGGKHVSLVTYAPFGRNRSMKVPIEDICCQERRT 661
A+++GAG L ++LRSVR +VL GG+ V+L T+APFG VP++ + C R
Sbjct: 106 ALVLGAGLL-----FSLRSVRSVVLRAGGQQVTLTTHAPFGLGAHFTVPLKQVSCMAHRG 160
Query: 662 VAKVQLPLKVRNRMMHYMLDMRGEFKNPLLFDCTAG 769
LPLKV+ R +++LD G F N LFD T G
Sbjct: 161 EVPAMLPLKVKGRRFYFLLDKTGHFPNTKLFDNTVG 196
>X69943-1|CAA49561.1| 100|Homo sapiens GTP binding protein protein.
Length = 100
Score = 31.9 bits (69), Expect = 3.2
Identities = 24/63 (38%), Positives = 31/63 (49%)
Frame = +2
Query: 542 RYLVLHKGGKHVSLVTYAPFGRNRSMKVPIEDICCQERRTVAKVQLPLKVRNRMMHYMLD 721
+Y VL GG + V AP GR V ED+ E R +LPL VR+R + L
Sbjct: 29 QYPVLTHGGL-LPRVRRAPAGRPGGAGVHPEDVSGHEPRQRQDHRLPLHVRHRHEEHPLR 87
Query: 722 MRG 730
+RG
Sbjct: 88 VRG 90
>AM746210-1|CAN88919.1| 302|Homo sapiens PDHA1/LOC79064 protein
protein.
Length = 302
Score = 31.5 bits (68), Expect = 4.2
Identities = 11/41 (26%), Positives = 23/41 (56%)
Frame = +3
Query: 249 TNVAKDVILFKYENPSFYKYMNIFAVVQYAFWMYLGIFSFS 371
T + +DV+LF+++ F+ + +F Q FW + + + S
Sbjct: 30 TTLQRDVLLFEHDRGRFFTILGLFCAGQGVFWASMAVAAVS 70
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 115,121,002
Number of Sequences: 237096
Number of extensions: 2393287
Number of successful extensions: 4602
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 4200
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4602
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11381686510
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -