Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP16_F_H18
         (887 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118499-1|AAM49868.1|  231|Drosophila melanogaster LD08826p pro...   123   4e-28
AE013599-1170|AAF58754.1|  231|Drosophila melanogaster CG12935-P...   123   4e-28

>AY118499-1|AAM49868.1|  231|Drosophila melanogaster LD08826p
           protein.
          Length = 231

 Score =  123 bits (296), Expect = 4e-28
 Identities = 54/94 (57%), Positives = 73/94 (77%)
 Frame = +2

Query: 488 IIGAGSLTMIWMYTLRSVRYLVLHKGGKHVSLVTYAPFGRNRSMKVPIEDICCQERRTVA 667
           +IG G L  +WM+TLRSVR+L+L KGG+ VS VTY PF RNR M VP++ +  +E R +A
Sbjct: 133 LIGYGILFAVWMFTLRSVRFLILRKGGQSVSFVTYGPFNRNRIMTVPLKCVSAEESRNMA 192

Query: 668 KVQLPLKVRNRMMHYMLDMRGEFKNPLLFDCTAG 769
           +VQLP+KV+ + ++Y+LDMRGEF+N  LFD TAG
Sbjct: 193 RVQLPIKVKGKTLYYVLDMRGEFRNGELFDYTAG 226



 Score = 83.4 bits (197), Expect = 4e-16
 Identities = 38/69 (55%), Positives = 47/69 (68%)
 Frame = +3

Query: 240 DVNTNVAKDVILFKYENPSFYKYMNIFAVVQYAFWMYLGIFSFSTLKDAPVDKSKITEDT 419
           DVNT+V KD+ILFKYENP FY+ +N F V Q+ FW YL  F+F+TLKDAPV   K  E+ 
Sbjct: 52  DVNTSVPKDIILFKYENPRFYQMLNFFGVCQFVFWTYLSHFAFTTLKDAPV-VEKPGEEL 110

Query: 420 PWL*KNKFG 446
            W  +   G
Sbjct: 111 KWFQRINLG 119


>AE013599-1170|AAF58754.1|  231|Drosophila melanogaster CG12935-PA
           protein.
          Length = 231

 Score =  123 bits (296), Expect = 4e-28
 Identities = 54/94 (57%), Positives = 73/94 (77%)
 Frame = +2

Query: 488 IIGAGSLTMIWMYTLRSVRYLVLHKGGKHVSLVTYAPFGRNRSMKVPIEDICCQERRTVA 667
           +IG G L  +WM+TLRSVR+L+L KGG+ VS VTY PF RNR M VP++ +  +E R +A
Sbjct: 133 LIGYGILFAVWMFTLRSVRFLILRKGGQSVSFVTYGPFNRNRIMTVPLKCVSAEESRNMA 192

Query: 668 KVQLPLKVRNRMMHYMLDMRGEFKNPLLFDCTAG 769
           +VQLP+KV+ + ++Y+LDMRGEF+N  LFD TAG
Sbjct: 193 RVQLPIKVKGKTLYYVLDMRGEFRNGELFDYTAG 226



 Score = 83.4 bits (197), Expect = 4e-16
 Identities = 38/69 (55%), Positives = 47/69 (68%)
 Frame = +3

Query: 240 DVNTNVAKDVILFKYENPSFYKYMNIFAVVQYAFWMYLGIFSFSTLKDAPVDKSKITEDT 419
           DVNT+V KD+ILFKYENP FY+ +N F V Q+ FW YL  F+F+TLKDAPV   K  E+ 
Sbjct: 52  DVNTSVPKDIILFKYENPRFYQMLNFFGVCQFVFWTYLSHFAFTTLKDAPV-VEKPGEEL 110

Query: 420 PWL*KNKFG 446
            W  +   G
Sbjct: 111 KWFQRINLG 119


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,354,257
Number of Sequences: 53049
Number of extensions: 716314
Number of successful extensions: 1450
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1385
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1450
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4332305172
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)