Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP16_F_H17
         (863 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_03_0124 - 16942492-16945032,16945478-16945572,16945966-169460...    30   2.1  
12_02_0131 - 14030721-14030774,14030848-14031027,14032050-140323...    29   6.3  
05_07_0138 + 27962864-27963184,27963297-27963431,27963959-279640...    29   6.3  
03_05_1117 - 30526126-30526640,30527114-30527186,30527310-305278...    28   8.4  

>06_03_0124 -
           16942492-16945032,16945478-16945572,16945966-16946076,
           16946142-16946229
          Length = 944

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = -3

Query: 108 SCFQGFSGLLDSICQIFNDINCQILRIP 25
           SC  G+SG L+S+C    D+   +LR P
Sbjct: 12  SCLVGWSGTLNSLCSFLLDVRNSLLREP 39


>12_02_0131 -
           14030721-14030774,14030848-14031027,14032050-14032303,
           14034414-14034488,14034682-14034910
          Length = 263

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 19/68 (27%), Positives = 30/68 (44%)
 Frame = -3

Query: 759 IQKPNSKSKVFSSVSPEEVLLNHSEMVNWTSPNCEFHCSANSFQLQKLWCELITNKSPRI 580
           +Q+P + S + S ++ E  + NHS    W +       S   F  Q   C L+ + S   
Sbjct: 152 VQQPATLSHLLSQITVETTVYNHS---RWITLGAS-RSSPMQFPQQSAECHLVRSTSGD- 206

Query: 579 WIQGLLCG 556
           W   L+CG
Sbjct: 207 WAPMLVCG 214


>05_07_0138 +
           27962864-27963184,27963297-27963431,27963959-27964069,
           27964622-27964903,27965246-27965445,27965595-27965826,
           27965855-27965875
          Length = 433

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 25/66 (37%), Positives = 30/66 (45%), Gaps = 2/66 (3%)
 Frame = -3

Query: 753 KPNSKSKVFSSVSPEEVLLNHSEMVNWTSPNCEFHCSANSFQLQKLWCELITNKSPRI-- 580
           K +S  K    + P E LLNH E  N+ S   E +  A   Q  K    LITN S  +  
Sbjct: 358 KSSSSRKKLMRI-PYETLLNHEENANFAS---ELNEGAGIIQKSKAATILITNDSDTLDA 413

Query: 579 WIQGLL 562
             QGLL
Sbjct: 414 EFQGLL 419


>03_05_1117 -
           30526126-30526640,30527114-30527186,30527310-30527848,
           30528215-30528332
          Length = 414

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 17/46 (36%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
 Frame = +3

Query: 30  SLRF-DSLCH*IFD-RSSQEARKTLENKKMVL*KDHFFLLFKNLET 161
           S+RF DS+ H + + + SQEA   L  +K+   KDH   L++ L++
Sbjct: 299 SVRFEDSIDHALKELKRSQEAEYKLAEQKLYSQKDHVLSLYRQLDS 344


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,072,209
Number of Sequences: 37544
Number of extensions: 416820
Number of successful extensions: 990
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 960
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 990
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2420970504
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)