Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP16_F_H17
         (863 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U40998-1|AAC50360.1|  240|Homo sapiens retinal protein protein.       173   9e-43
BC027176-1|AAH27176.1|  240|Homo sapiens unc-119 homolog (C. ele...   173   9e-43
AF125998-1|AAD31422.1|  240|Homo sapiens retinal photoreceptor s...   173   9e-43
AF028788-1|AAD01875.1|  240|Homo sapiens UNC-119 protein.             173   9e-43
AF028789-1|AAD01876.1|  220|Homo sapiens UNC-119b protein.            162   2e-39
BX641031-1|CAE46019.1|  167|Homo sapiens hypothetical protein pr...   155   1e-37

>U40998-1|AAC50360.1|  240|Homo sapiens retinal protein protein.
          Length = 240

 Score =  173 bits (420), Expect = 9e-43
 Identities = 90/164 (54%), Positives = 110/164 (67%)
 Frame = +1

Query: 370 VTPEDVLRLERITDTYLCSPEANVYDIDFTRFKIRDLETGTVLFEIAKPPTDFGVDNDSL 549
           + PEDVL L+RIT  YLCSPE N+Y IDF RFKIRD+++GTVLFEI KPP      ++ L
Sbjct: 60  IGPEDVLGLQRITGDYLCSPEENIYKIDFVRFKIRDMDSGTVLFEIKKPPV-----SERL 114

Query: 550 EDSTEEPLDPNAGRFVRYQFTPQFLKLKTVGATVEFTVGARPVNHFRMIEKHFFRGYTTE 729
             +  + LDPNAGRFVRYQFTP FL+L+ VGATVEFTVG +PVN+FRMIE+H+FR    +
Sbjct: 115 PINRRD-LDPNAGRFVRYQFTPAFLRLRQVGATVEFTVGDKPVNNFRMIERHYFRNQLLK 173

Query: 730 NF*F*VWFLYSILKKHLRAHL*VXTLPPXLVEEMIAAPFETCSD 861
           +F F   F     K           L   L+ EMI  P+ET SD
Sbjct: 174 SFDFHFGFCIPSSKNTCEHIYDFPPLSEELISEMIRHPYETQSD 217


>BC027176-1|AAH27176.1|  240|Homo sapiens unc-119 homolog (C.
           elegans) protein.
          Length = 240

 Score =  173 bits (420), Expect = 9e-43
 Identities = 90/164 (54%), Positives = 110/164 (67%)
 Frame = +1

Query: 370 VTPEDVLRLERITDTYLCSPEANVYDIDFTRFKIRDLETGTVLFEIAKPPTDFGVDNDSL 549
           + PEDVL L+RIT  YLCSPE N+Y IDF RFKIRD+++GTVLFEI KPP      ++ L
Sbjct: 60  IGPEDVLGLQRITGDYLCSPEENIYKIDFVRFKIRDMDSGTVLFEIKKPPV-----SERL 114

Query: 550 EDSTEEPLDPNAGRFVRYQFTPQFLKLKTVGATVEFTVGARPVNHFRMIEKHFFRGYTTE 729
             +  + LDPNAGRFVRYQFTP FL+L+ VGATVEFTVG +PVN+FRMIE+H+FR    +
Sbjct: 115 PINRRD-LDPNAGRFVRYQFTPAFLRLRQVGATVEFTVGDKPVNNFRMIERHYFRNQLLK 173

Query: 730 NF*F*VWFLYSILKKHLRAHL*VXTLPPXLVEEMIAAPFETCSD 861
           +F F   F     K           L   L+ EMI  P+ET SD
Sbjct: 174 SFDFHFGFCIPSSKNTCEHIYDFPPLSEELISEMIRHPYETQSD 217


>AF125998-1|AAD31422.1|  240|Homo sapiens retinal photoreceptor
           synaptic protein protein.
          Length = 240

 Score =  173 bits (420), Expect = 9e-43
 Identities = 90/164 (54%), Positives = 110/164 (67%)
 Frame = +1

Query: 370 VTPEDVLRLERITDTYLCSPEANVYDIDFTRFKIRDLETGTVLFEIAKPPTDFGVDNDSL 549
           + PEDVL L+RIT  YLCSPE N+Y IDF RFKIRD+++GTVLFEI KPP      ++ L
Sbjct: 60  IGPEDVLGLQRITGDYLCSPEENIYKIDFVRFKIRDMDSGTVLFEIKKPPV-----SERL 114

Query: 550 EDSTEEPLDPNAGRFVRYQFTPQFLKLKTVGATVEFTVGARPVNHFRMIEKHFFRGYTTE 729
             +  + LDPNAGRFVRYQFTP FL+L+ VGATVEFTVG +PVN+FRMIE+H+FR    +
Sbjct: 115 PINRRD-LDPNAGRFVRYQFTPAFLRLRQVGATVEFTVGDKPVNNFRMIERHYFRNQLLK 173

Query: 730 NF*F*VWFLYSILKKHLRAHL*VXTLPPXLVEEMIAAPFETCSD 861
           +F F   F     K           L   L+ EMI  P+ET SD
Sbjct: 174 SFDFHFGFCIPSSKNTCEHIYDFPPLSEELISEMIRHPYETQSD 217


>AF028788-1|AAD01875.1|  240|Homo sapiens UNC-119 protein.
          Length = 240

 Score =  173 bits (420), Expect = 9e-43
 Identities = 90/164 (54%), Positives = 110/164 (67%)
 Frame = +1

Query: 370 VTPEDVLRLERITDTYLCSPEANVYDIDFTRFKIRDLETGTVLFEIAKPPTDFGVDNDSL 549
           + PEDVL L+RIT  YLCSPE N+Y IDF RFKIRD+++GTVLFEI KPP      ++ L
Sbjct: 60  IGPEDVLGLQRITGDYLCSPEENIYKIDFVRFKIRDMDSGTVLFEIKKPPV-----SERL 114

Query: 550 EDSTEEPLDPNAGRFVRYQFTPQFLKLKTVGATVEFTVGARPVNHFRMIEKHFFRGYTTE 729
             +  + LDPNAGRFVRYQFTP FL+L+ VGATVEFTVG +PVN+FRMIE+H+FR    +
Sbjct: 115 PINRRD-LDPNAGRFVRYQFTPAFLRLRQVGATVEFTVGDKPVNNFRMIERHYFRNQLLK 173

Query: 730 NF*F*VWFLYSILKKHLRAHL*VXTLPPXLVEEMIAAPFETCSD 861
           +F F   F     K           L   L+ EMI  P+ET SD
Sbjct: 174 SFDFHFGFCIPSSKNTCEHIYDFPPLSEELISEMIRHPYETQSD 217


>AF028789-1|AAD01876.1|  220|Homo sapiens UNC-119b protein.
          Length = 220

 Score =  162 bits (393), Expect = 2e-39
 Identities = 78/124 (62%), Positives = 96/124 (77%)
 Frame = +1

Query: 370 VTPEDVLRLERITDTYLCSPEANVYDIDFTRFKIRDLETGTVLFEIAKPPTDFGVDNDSL 549
           + PEDVL L+RIT  YLCSPE N+Y IDF RFKIRD+++GTVLFEI KPP      ++ L
Sbjct: 60  IGPEDVLGLQRITGDYLCSPEENIYKIDFVRFKIRDMDSGTVLFEIKKPPV-----SERL 114

Query: 550 EDSTEEPLDPNAGRFVRYQFTPQFLKLKTVGATVEFTVGARPVNHFRMIEKHFFRGYTTE 729
             +  + LDPNAGRFVRYQFTP FL+L+ VGATVEFTVG +PVN+FRMIE+H+FR    +
Sbjct: 115 PINRRD-LDPNAGRFVRYQFTPAFLRLRQVGATVEFTVGDKPVNNFRMIERHYFRNQLLK 173

Query: 730 NF*F 741
           +F F
Sbjct: 174 SFDF 177



 Score = 52.4 bits (120), Expect = 2e-06
 Identities = 20/25 (80%), Positives = 23/25 (92%)
 Frame = +2

Query: 722 LLKTFDFEFGFCIPFSRNTCEHIYE 796
           LLK+FDF FGFCIP S+NTCEHIY+
Sbjct: 171 LLKSFDFHFGFCIPSSKNTCEHIYD 195


>BX641031-1|CAE46019.1|  167|Homo sapiens hypothetical protein
           protein.
          Length = 167

 Score =  155 bits (377), Expect = 1e-37
 Identities = 81/149 (54%), Positives = 99/149 (66%)
 Frame = +1

Query: 415 YLCSPEANVYDIDFTRFKIRDLETGTVLFEIAKPPTDFGVDNDSLEDSTEEPLDPNAGRF 594
           YLCSPE N+Y IDF RFKIRD+++GTVLFEI KPP      ++ L  +  + LDPNAGRF
Sbjct: 2   YLCSPEENIYKIDFVRFKIRDMDSGTVLFEIKKPPV-----SERLPINRRD-LDPNAGRF 55

Query: 595 VRYQFTPQFLKLKTVGATVEFTVGARPVNHFRMIEKHFFRGYTTENF*F*VWFLYSILKK 774
           VRYQFTP FL+L+ VGATVEFTVG +PVN+FRMIE+H+FR    ++F F   F     K 
Sbjct: 56  VRYQFTPAFLRLRQVGATVEFTVGDKPVNNFRMIERHYFRNQLLKSFDFHFGFCIPSSKN 115

Query: 775 HLRAHL*VXTLPPXLVEEMIAAPFETCSD 861
                     L   L+ EMI  P+ET SD
Sbjct: 116 TCEHIYDFPPLSEELISEMIRHPYETQSD 144


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 116,064,661
Number of Sequences: 237096
Number of extensions: 2407418
Number of successful extensions: 8325
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8128
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8309
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 11039988564
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)