Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP16_F_H17
(863 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z73428-1|CAA97807.1| 219|Caenorhabditis elegans Hypothetical pr... 146 2e-35
U32854-1|AAC46919.1| 219|Caenorhabditis elegans unc-119 protein. 146 2e-35
U64847-10|AAB04877.2| 404|Caenorhabditis elegans Hypothetical p... 30 1.9
U64847-9|AAQ23119.1| 426|Caenorhabditis elegans Hypothetical pr... 30 1.9
AF098994-5|AAC67473.3| 579|Caenorhabditis elegans Hypothetical ... 29 4.3
U41550-3|AAA83286.1| 228|Caenorhabditis elegans Initiation fact... 29 5.7
Z70783-9|CAA94857.2| 455|Caenorhabditis elegans Hypothetical pr... 28 7.5
Z29116-5|CAA82373.1| 1295|Caenorhabditis elegans Hypothetical pr... 28 7.5
Z19555-7|CAA79620.1| 1295|Caenorhabditis elegans Hypothetical pr... 28 7.5
U39649-1|AAA80383.2| 437|Caenorhabditis elegans Temporarily ass... 28 7.5
M25580-1|AAA28058.1| 1295|Caenorhabditis elegans protein ( C.ele... 28 7.5
>Z73428-1|CAA97807.1| 219|Caenorhabditis elegans Hypothetical
protein M142.1 protein.
Length = 219
Score = 146 bits (354), Expect = 2e-35
Identities = 84/168 (50%), Positives = 103/168 (61%), Gaps = 2/168 (1%)
Frame = +1
Query: 364 NQVTPEDVLRLERITDTYLCSPEANVYDIDFTRFKIRDLETGTVLFEIAKPPTDFGVDND 543
NQ+TP DVL L IT +LCSP ANVY+I+FT+F+IRDL+T VLFEIAKP
Sbjct: 42 NQITPNDVLALPGITQGFLCSPSANVYNIEFTKFQIRDLDTEHVLFEIAKP--------- 92
Query: 544 SLEDSTEEPLDPNA--GRFVRYQFTPQFLKLKTVGATVEFTVGARPVNHFRMIEKHFFRG 717
E+ TEE L A R+VRY+F P FLKLKTVGATVEF VG P+ HFRMIE+HFF+
Sbjct: 93 --ENETEENLQAQAESARYVRYRFAPNFLKLKTVGATVEFKVGDVPITHFRMIERHFFKD 150
Query: 718 YTTENF*F*VWFLYSILKKHLRAHL*VXTLPPXLVEEMIAAPFETCSD 861
+ F F F + + L L+++MI P ET SD
Sbjct: 151 RLLKCFDFEFGFCMPNSRNNCEHIYEFPQLSQQLMDDMINNPNETRSD 198
>U32854-1|AAC46919.1| 219|Caenorhabditis elegans unc-119 protein.
Length = 219
Score = 146 bits (354), Expect = 2e-35
Identities = 84/168 (50%), Positives = 103/168 (61%), Gaps = 2/168 (1%)
Frame = +1
Query: 364 NQVTPEDVLRLERITDTYLCSPEANVYDIDFTRFKIRDLETGTVLFEIAKPPTDFGVDND 543
NQ+TP DVL L IT +LCSP ANVY+I+FT+F+IRDL+T VLFEIAKP
Sbjct: 42 NQITPNDVLALPGITQGFLCSPSANVYNIEFTKFQIRDLDTEHVLFEIAKP--------- 92
Query: 544 SLEDSTEEPLDPNA--GRFVRYQFTPQFLKLKTVGATVEFTVGARPVNHFRMIEKHFFRG 717
E+ TEE L A R+VRY+F P FLKLKTVGATVEF VG P+ HFRMIE+HFF+
Sbjct: 93 --ENETEENLQAQAESARYVRYRFAPNFLKLKTVGATVEFKVGDVPITHFRMIERHFFKD 150
Query: 718 YTTENF*F*VWFLYSILKKHLRAHL*VXTLPPXLVEEMIAAPFETCSD 861
+ F F F + + L L+++MI P ET SD
Sbjct: 151 RLLKCFDFEFGFCMPNSRNNCEHIYEFPQLSQQLMDDMINNPNETRSD 198
>U64847-10|AAB04877.2| 404|Caenorhabditis elegans Hypothetical
protein F08F3.9a protein.
Length = 404
Score = 30.3 bits (65), Expect = 1.9
Identities = 28/102 (27%), Positives = 41/102 (40%), Gaps = 3/102 (2%)
Frame = +1
Query: 334 HESIKDDVISNQVTPEDVLRLERITDTYLCSPEANVYDIDFTRFKIRDLETGTVLFEIAK 513
+ + + +V P+ VL R+T L + Y I + + D V F A
Sbjct: 102 YTQVSGHAVKIRVEPDTVLNFSRLTQLVLDEKIYDAYAI--CQKLLEDQAFKFVAFLHAN 159
Query: 514 PPT---DFGVDNDSLEDSTEEPLDPNAGRFVRYQFTPQFLKL 630
PT FG DN++ T L+ GRF +P F KL
Sbjct: 160 DPTLFKRFGQDNEANPAKTLVNLNDPLGRFKALVESPVFAKL 201
>U64847-9|AAQ23119.1| 426|Caenorhabditis elegans Hypothetical
protein F08F3.9b protein.
Length = 426
Score = 30.3 bits (65), Expect = 1.9
Identities = 28/102 (27%), Positives = 41/102 (40%), Gaps = 3/102 (2%)
Frame = +1
Query: 334 HESIKDDVISNQVTPEDVLRLERITDTYLCSPEANVYDIDFTRFKIRDLETGTVLFEIAK 513
+ + + +V P+ VL R+T L + Y I + + D V F A
Sbjct: 102 YTQVSGHAVKIRVEPDTVLNFSRLTQLVLDEKIYDAYAI--CQKLLEDQAFKFVAFLHAN 159
Query: 514 PPT---DFGVDNDSLEDSTEEPLDPNAGRFVRYQFTPQFLKL 630
PT FG DN++ T L+ GRF +P F KL
Sbjct: 160 DPTLFKRFGQDNEANPAKTLVNLNDPLGRFKALVESPVFAKL 201
>AF098994-5|AAC67473.3| 579|Caenorhabditis elegans Hypothetical
protein T06A4.1a protein.
Length = 579
Score = 29.1 bits (62), Expect = 4.3
Identities = 27/115 (23%), Positives = 48/115 (41%), Gaps = 3/115 (2%)
Frame = +1
Query: 250 LNLSPENQT---GYFVRKMSLVGKKCESISLHESIKDDVISNQVTPEDVLRLERITDTYL 420
+ L P+N G+ + + +V E+ + + D++++ V P V+R + T T
Sbjct: 397 IELRPKNTMMGHGFLLPEREIVPTGLETFESIKVVADELVAQFVEP--VIRAKLTTTTKP 454
Query: 421 CSPEANVYDIDFTRFKIRDLETGTVLFEIAKPPTDFGVDNDSLEDSTEEPLDPNA 585
P + I D T + EI + PT+ + +TEEP P A
Sbjct: 455 AIPPYR------RGYSIIDTTTMEPVDEITQKPTEAPTTEEPTTTTTEEPTTPEA 503
>U41550-3|AAA83286.1| 228|Caenorhabditis elegans Initiation factor
4e (eif4e) familyprotein 2 protein.
Length = 228
Score = 28.7 bits (61), Expect = 5.7
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +1
Query: 514 PPTDFGVDNDSLEDSTEEPLDPNAGRFV 597
PP+D+ V D +E E P + N GR++
Sbjct: 67 PPSDYNVFRDGIEPMWEVPQNQNGGRWL 94
>Z70783-9|CAA94857.2| 455|Caenorhabditis elegans Hypothetical
protein ZK856.9 protein.
Length = 455
Score = 28.3 bits (60), Expect = 7.5
Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = +1
Query: 529 GVDND-SLEDSTEEPLDPNAGRFVRYQFTPQFL 624
GV ND + D E+P+DPNA R+ T ++L
Sbjct: 162 GVGNDVNSSDGEEKPVDPNALRYTTNSPTERYL 194
>Z29116-5|CAA82373.1| 1295|Caenorhabditis elegans Hypothetical
protein F02A9.6 protein.
Length = 1295
Score = 28.3 bits (60), Expect = 7.5
Identities = 16/61 (26%), Positives = 27/61 (44%)
Frame = +1
Query: 274 TGYFVRKMSLVGKKCESISLHESIKDDVISNQVTPEDVLRLERITDTYLCSPEANVYDID 453
TGY + G CE + + E K+ VI + + L +C+PE N+ + +
Sbjct: 464 TGYCECQYGYTGPTCEEVLVIEKSKETVIRDLCEQRKCMDL---ASNGICNPECNLEECN 520
Query: 454 F 456
F
Sbjct: 521 F 521
>Z19555-7|CAA79620.1| 1295|Caenorhabditis elegans Hypothetical
protein F02A9.6 protein.
Length = 1295
Score = 28.3 bits (60), Expect = 7.5
Identities = 16/61 (26%), Positives = 27/61 (44%)
Frame = +1
Query: 274 TGYFVRKMSLVGKKCESISLHESIKDDVISNQVTPEDVLRLERITDTYLCSPEANVYDID 453
TGY + G CE + + E K+ VI + + L +C+PE N+ + +
Sbjct: 464 TGYCECQYGYTGPTCEEVLVIEKSKETVIRDLCEQRKCMDL---ASNGICNPECNLEECN 520
Query: 454 F 456
F
Sbjct: 521 F 521
>U39649-1|AAA80383.2| 437|Caenorhabditis elegans Temporarily
assigned gene nameprotein 249 protein.
Length = 437
Score = 28.3 bits (60), Expect = 7.5
Identities = 12/35 (34%), Positives = 22/35 (62%), Gaps = 6/35 (17%)
Frame = -3
Query: 732 VFSSVSPEEVLLNHS----EMVNWTSPNCE--FHC 646
VFS+++P+ +++HS M+ W P C+ F+C
Sbjct: 78 VFSNLNPDVAIIDHSASCVPMIKWRFPQCKILFYC 112
>M25580-1|AAA28058.1| 1295|Caenorhabditis elegans protein (
C.elegans glp-1 gene,complete cds. ).
Length = 1295
Score = 28.3 bits (60), Expect = 7.5
Identities = 16/61 (26%), Positives = 27/61 (44%)
Frame = +1
Query: 274 TGYFVRKMSLVGKKCESISLHESIKDDVISNQVTPEDVLRLERITDTYLCSPEANVYDID 453
TGY + G CE + + E K+ VI + + L +C+PE N+ + +
Sbjct: 464 TGYCECQYGYTGPTCEEVLVIEKSKETVIRDLCEQRKCMDL---ASNGICNPECNLEECN 520
Query: 454 F 456
F
Sbjct: 521 F 521
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,473,715
Number of Sequences: 27780
Number of extensions: 423095
Number of successful extensions: 1181
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1133
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1177
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2160943708
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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