Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP16_F_H17
         (863 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.                25   1.2  
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          23   3.6  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      23   3.6  
DQ667184-1|ABG75736.1|  489|Apis mellifera GABA-gated ion channe...    23   4.8  
DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               22   6.3  
DQ435328-1|ABD92643.1|  143|Apis mellifera OBP11 protein.              22   8.4  
AY739659-1|AAU85298.1|  288|Apis mellifera hyperpolarization-act...    22   8.4  
AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    22   8.4  

>AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.
          Length = 316

 Score = 24.6 bits (51), Expect = 1.2
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = -2

Query: 583 HLDPRAPLWNLPKNHYRRRNQ 521
           +L PR P+ N+ KN+   +NQ
Sbjct: 26  YLSPRTPIKNVYKNNIETKNQ 46


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 23.0 bits (47), Expect = 3.6
 Identities = 12/42 (28%), Positives = 21/42 (50%)
 Frame = -2

Query: 313 FFRQGSFCGQSNLFGFQDLSLKREALVKL*DLYNVDYIKTFY 188
           +++QG F  ++ +F   +   K E  +    LYN    +TFY
Sbjct: 84  WYKQGMFLSRNAIFTPLNSEQKYEVRMLFELLYNAKDFQTFY 125


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 23.0 bits (47), Expect = 3.6
 Identities = 12/42 (28%), Positives = 21/42 (50%)
 Frame = -2

Query: 313 FFRQGSFCGQSNLFGFQDLSLKREALVKL*DLYNVDYIKTFY 188
           +++QG F  ++ +F   +   K E  +    LYN    +TFY
Sbjct: 84  WYKQGMFLSRNAIFTPLNSEQKYEVRMLFELLYNAKDFQTFY 125


>DQ667184-1|ABG75736.1|  489|Apis mellifera GABA-gated ion channel
           protein.
          Length = 489

 Score = 22.6 bits (46), Expect = 4.8
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = -3

Query: 567 LLCGIFQRIIIDAEISRRFSYF 502
           L  GI+QR+ +  ++ R   YF
Sbjct: 223 LATGIYQRLSLSFKLQRNIGYF 244


>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 22.2 bits (45), Expect = 6.3
 Identities = 9/24 (37%), Positives = 16/24 (66%)
 Frame = -3

Query: 771 LENGIQKPNSKSKVFSSVSPEEVL 700
           LE+G  KPN K ++ + +S  +V+
Sbjct: 254 LEDGKLKPNKKVRISNEMSKVKVI 277


>DQ435328-1|ABD92643.1|  143|Apis mellifera OBP11 protein.
          Length = 143

 Score = 21.8 bits (44), Expect = 8.4
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -1

Query: 362 EITSSLIDSCKDIDS 318
           EI   +IDSC ++DS
Sbjct: 104 EIGVEMIDSCSNVDS 118


>AY739659-1|AAU85298.1|  288|Apis mellifera
           hyperpolarization-activated ion channelvariant T
           protein.
          Length = 288

 Score = 21.8 bits (44), Expect = 8.4
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = -2

Query: 565 PLWNLPKNHYRRR 527
           PL+  P+ HY RR
Sbjct: 238 PLYQQPERHYERR 250


>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 21.8 bits (44), Expect = 8.4
 Identities = 9/31 (29%), Positives = 17/31 (54%)
 Frame = +2

Query: 398 RELQIHTSAALKLMYTTSILRDLKFEI*KLE 490
           R + I     ++ +  T+++RDL  E  K+E
Sbjct: 486 RSVMIQAIRVVQKLVNTTVMRDLGVEFQKIE 516


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 234,264
Number of Sequences: 438
Number of extensions: 5262
Number of successful extensions: 14
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27916710
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)