Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP16_F_H14
(861 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL021488-2|CAA16367.2| 378|Caenorhabditis elegans Hypothetical ... 232 3e-61
U70844-4|AAB09095.2| 1105|Caenorhabditis elegans Hypothetical pr... 32 0.60
Z81486-13|CAE47465.1| 611|Caenorhabditis elegans Hypothetical p... 31 1.1
Z81486-12|CAC42272.1| 585|Caenorhabditis elegans Hypothetical p... 31 1.1
AY221631-1|AAP97492.1| 611|Caenorhabditis elegans muscarinic ac... 31 1.1
AL034391-3|CAE47471.1| 611|Caenorhabditis elegans Hypothetical ... 31 1.1
AL034391-2|CAA22301.2| 585|Caenorhabditis elegans Hypothetical ... 31 1.1
AF139093-1|AAD48771.1| 585|Caenorhabditis elegans muscarinic ac... 31 1.1
Z68108-13|CAF31493.1| 2048|Caenorhabditis elegans Hypothetical p... 31 1.4
U21309-6|AAT92086.1| 541|Caenorhabditis elegans Hypothetical pr... 30 2.4
U21309-5|AAT92085.1| 536|Caenorhabditis elegans Hypothetical pr... 30 2.4
U21309-4|AAN73883.1| 546|Caenorhabditis elegans Hypothetical pr... 30 2.4
AY314778-1|AAQ84885.1| 546|Caenorhabditis elegans calcitonin re... 30 2.4
AY314777-1|AAQ84884.1| 541|Caenorhabditis elegans calcitonin re... 30 2.4
AY314776-1|AAQ84883.1| 536|Caenorhabditis elegans calcitonin re... 30 2.4
U46669-3|AAA85744.2| 737|Caenorhabditis elegans Regulator of g ... 28 9.8
AF106573-7|AAC78158.1| 838|Caenorhabditis elegans Hypothetical ... 28 9.8
>AL021488-2|CAA16367.2| 378|Caenorhabditis elegans Hypothetical
protein Y45F10A.4 protein.
Length = 378
Score = 232 bits (567), Expect = 3e-61
Identities = 111/199 (55%), Positives = 146/199 (73%)
Frame = +3
Query: 243 FDPVAHDLEASFRLTRFADLKGRSCKVPQDVLGKLVESLQQDYSQADQDQFMHVAIPRIG 422
FDPV++ L+ F LT+ +KG CKVP++VL +L+++ + D + D+ +
Sbjct: 11 FDPVSNGLDEDFVLTKLTGMKGCGCKVPRNVLLQLLQTFKTDLV-INNDE--------VD 61
Query: 423 IGLDCSVTPLRHGGLCLVQTTDFFYPLVDDPYMMGKIACANVLSDLYAMGVTECDNMLML 602
IGLD V PLRH GL LVQTTDFFYPL+DDPY+MG++ CANVLSDLYAMGV+ECDNMLML
Sbjct: 62 IGLDSCVIPLRHPGLRLVQTTDFFYPLIDDPYIMGRVTCANVLSDLYAMGVSECDNMLML 121
Query: 603 LGVSTKMTEKERDVVIPLIMRGFKDSALEAGTSVTGGQTVINPWCTIGGVATTICQPNEY 782
L V+ + EK+RD+V+PL ++GFKD+A EAGT + GGQTV PW +GGVAT++ +E
Sbjct: 122 LAVAIDLNEKQRDIVVPLFIQGFKDAADEAGTKIRGGQTVRCPWLLLGGVATSVAHESEI 181
Query: 783 IVPDNAVMGDVLVLTNPLG 839
I D AV GDVL+LT P+G
Sbjct: 182 IKVDQAVPGDVLILTKPIG 200
>U70844-4|AAB09095.2| 1105|Caenorhabditis elegans Hypothetical
protein ZK154.5 protein.
Length = 1105
Score = 31.9 bits (69), Expect = 0.60
Identities = 18/53 (33%), Positives = 30/53 (56%), Gaps = 5/53 (9%)
Frame = -3
Query: 358 KDSTSFP--RTS*GTLQLLPFRSANRVSRKLASKSCATGS---NGRRKAIELG 215
KDST + R + GT+ L ++ R+ +++ S C+T S +GR K+ E G
Sbjct: 677 KDSTIYQLKRFTVGTISLTEQKTVERIKQEIPSSECSTASLDGDGREKSFETG 729
>Z81486-13|CAE47465.1| 611|Caenorhabditis elegans Hypothetical
protein Y40H4A.1b protein.
Length = 611
Score = 31.1 bits (67), Expect = 1.1
Identities = 21/57 (36%), Positives = 28/57 (49%), Gaps = 5/57 (8%)
Frame = -2
Query: 788 YNVLIRLADSGSNP----TNCAPGVDDSLPTSDR-RSCLQSGIFEPAHYKRNNDVAF 633
Y VLI L D GS P ++C P +D+ + T +R +S S I E H N F
Sbjct: 435 YTVLIELNDEGSRPSVRLSSCEPYLDEPISTRNRSKSDCNSEIDERRHSLLNKQSPF 491
>Z81486-12|CAC42272.1| 585|Caenorhabditis elegans Hypothetical
protein Y40H4A.1a protein.
Length = 585
Score = 31.1 bits (67), Expect = 1.1
Identities = 21/57 (36%), Positives = 28/57 (49%), Gaps = 5/57 (8%)
Frame = -2
Query: 788 YNVLIRLADSGSNP----TNCAPGVDDSLPTSDR-RSCLQSGIFEPAHYKRNNDVAF 633
Y VLI L D GS P ++C P +D+ + T +R +S S I E H N F
Sbjct: 409 YTVLIELNDEGSRPSVRLSSCEPYLDEPISTRNRSKSDCNSEIDERRHSLLNKQSPF 465
>AY221631-1|AAP97492.1| 611|Caenorhabditis elegans muscarinic
acetylcholine receptorlarge isoform protein.
Length = 611
Score = 31.1 bits (67), Expect = 1.1
Identities = 21/57 (36%), Positives = 28/57 (49%), Gaps = 5/57 (8%)
Frame = -2
Query: 788 YNVLIRLADSGSNP----TNCAPGVDDSLPTSDR-RSCLQSGIFEPAHYKRNNDVAF 633
Y VLI L D GS P ++C P +D+ + T +R +S S I E H N F
Sbjct: 435 YTVLIELNDEGSRPSVRLSSCEPYLDEPISTRNRSKSDCNSEIDERRHSLLNKQSPF 491
>AL034391-3|CAE47471.1| 611|Caenorhabditis elegans Hypothetical
protein Y40H4A.1b protein.
Length = 611
Score = 31.1 bits (67), Expect = 1.1
Identities = 21/57 (36%), Positives = 28/57 (49%), Gaps = 5/57 (8%)
Frame = -2
Query: 788 YNVLIRLADSGSNP----TNCAPGVDDSLPTSDR-RSCLQSGIFEPAHYKRNNDVAF 633
Y VLI L D GS P ++C P +D+ + T +R +S S I E H N F
Sbjct: 435 YTVLIELNDEGSRPSVRLSSCEPYLDEPISTRNRSKSDCNSEIDERRHSLLNKQSPF 491
>AL034391-2|CAA22301.2| 585|Caenorhabditis elegans Hypothetical
protein Y40H4A.1a protein.
Length = 585
Score = 31.1 bits (67), Expect = 1.1
Identities = 21/57 (36%), Positives = 28/57 (49%), Gaps = 5/57 (8%)
Frame = -2
Query: 788 YNVLIRLADSGSNP----TNCAPGVDDSLPTSDR-RSCLQSGIFEPAHYKRNNDVAF 633
Y VLI L D GS P ++C P +D+ + T +R +S S I E H N F
Sbjct: 409 YTVLIELNDEGSRPSVRLSSCEPYLDEPISTRNRSKSDCNSEIDERRHSLLNKQSPF 465
>AF139093-1|AAD48771.1| 585|Caenorhabditis elegans muscarinic
acetylcholine receptor protein.
Length = 585
Score = 31.1 bits (67), Expect = 1.1
Identities = 21/57 (36%), Positives = 28/57 (49%), Gaps = 5/57 (8%)
Frame = -2
Query: 788 YNVLIRLADSGSNP----TNCAPGVDDSLPTSDR-RSCLQSGIFEPAHYKRNNDVAF 633
Y VLI L D GS P ++C P +D+ + T +R +S S I E H N F
Sbjct: 409 YTVLIELNDEGSRPSVRLSSCEPYLDEPISTRNRSKSDCNSEIDERRHSLLNKQSPF 465
>Z68108-13|CAF31493.1| 2048|Caenorhabditis elegans Hypothetical
protein T05A10.1f protein.
Length = 2048
Score = 30.7 bits (66), Expect = 1.4
Identities = 16/59 (27%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = -3
Query: 709 PVTDVPASKAESLNPRIIRGITTSRS-FSVIFVETPNNMSILSHSVTPIAYRSLRTLAH 536
P T +PA + +L P +IR + +++ + TP+ V+ ++R L LAH
Sbjct: 1769 PTTSIPAPQPVALTPEMIRALANAQTPVTASMTNTPSTAQFPVGVVSTPSHRDLSFLAH 1827
>U21309-6|AAT92086.1| 541|Caenorhabditis elegans Hypothetical
protein C13B9.4c protein.
Length = 541
Score = 29.9 bits (64), Expect = 2.4
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = -1
Query: 372 NSLAVKTQQVFREHLEVLCNFFPLDQQIVSAENLPPNRAP 253
N LA + Q F E ++VL +PL ++++ NL P R P
Sbjct: 28 NVLASTSVQAFNEAMDVLEESYPLCKKMLDHNNLFPERDP 67
>U21309-5|AAT92085.1| 536|Caenorhabditis elegans Hypothetical
protein C13B9.4b protein.
Length = 536
Score = 29.9 bits (64), Expect = 2.4
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = -1
Query: 372 NSLAVKTQQVFREHLEVLCNFFPLDQQIVSAENLPPNRAP 253
N LA + Q F E ++VL +PL ++++ NL P R P
Sbjct: 28 NVLASTSVQAFNEAMDVLEESYPLCKKMLDHNNLFPERDP 67
>U21309-4|AAN73883.1| 546|Caenorhabditis elegans Hypothetical
protein C13B9.4a protein.
Length = 546
Score = 29.9 bits (64), Expect = 2.4
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = -1
Query: 372 NSLAVKTQQVFREHLEVLCNFFPLDQQIVSAENLPPNRAP 253
N LA + Q F E ++VL +PL ++++ NL P R P
Sbjct: 28 NVLASTSVQAFNEAMDVLEESYPLCKKMLDHNNLFPERDP 67
>AY314778-1|AAQ84885.1| 546|Caenorhabditis elegans calcitonin
receptor-like proteinSEB-1C protein.
Length = 546
Score = 29.9 bits (64), Expect = 2.4
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = -1
Query: 372 NSLAVKTQQVFREHLEVLCNFFPLDQQIVSAENLPPNRAP 253
N LA + Q F E ++VL +PL ++++ NL P R P
Sbjct: 28 NVLASTSVQAFNEAMDVLEESYPLCKKMLDHNNLFPERDP 67
>AY314777-1|AAQ84884.1| 541|Caenorhabditis elegans calcitonin
receptor-like proteinSEB-1B protein.
Length = 541
Score = 29.9 bits (64), Expect = 2.4
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = -1
Query: 372 NSLAVKTQQVFREHLEVLCNFFPLDQQIVSAENLPPNRAP 253
N LA + Q F E ++VL +PL ++++ NL P R P
Sbjct: 28 NVLASTSVQAFNEAMDVLEESYPLCKKMLDHNNLFPERDP 67
>AY314776-1|AAQ84883.1| 536|Caenorhabditis elegans calcitonin
receptor-like proteinSEB-1A protein.
Length = 536
Score = 29.9 bits (64), Expect = 2.4
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = -1
Query: 372 NSLAVKTQQVFREHLEVLCNFFPLDQQIVSAENLPPNRAP 253
N LA + Q F E ++VL +PL ++++ NL P R P
Sbjct: 28 NVLASTSVQAFNEAMDVLEESYPLCKKMLDHNNLFPERDP 67
>U46669-3|AAA85744.2| 737|Caenorhabditis elegans Regulator of g
protein signalingprotein 6 protein.
Length = 737
Score = 27.9 bits (59), Expect = 9.8
Identities = 16/54 (29%), Positives = 23/54 (42%)
Frame = -3
Query: 823 KTNTSPITALSGTMYSLGWQIVVATPPIVHQGLMTVCPPVTDVPASKAESLNPR 662
K+ TS SGT S + A PP++H + + P T + NPR
Sbjct: 675 KSPTSTTITTSGTTTSATSSVATAPPPVLH-AMRSASTPATSSQLTGGGGGNPR 727
>AF106573-7|AAC78158.1| 838|Caenorhabditis elegans Hypothetical
protein F52D2.6 protein.
Length = 838
Score = 27.9 bits (59), Expect = 9.8
Identities = 24/68 (35%), Positives = 25/68 (36%)
Frame = +3
Query: 285 TRFADLKGRSCKVPQDVLGKLVESLQQDYSQADQDQFMHVAIPRIGIGLDCSVTPLRHGG 464
TR L G C D KL ESL A D F P DC TP R G
Sbjct: 554 TRPEALIGERCLTSSDKSSKLNESLDVVPKLAALDSFHSTGTPVFTDCNDCP-TPKRSGF 612
Query: 465 LCLVQTTD 488
C V T +
Sbjct: 613 NCEVWTAE 620
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,709,838
Number of Sequences: 27780
Number of extensions: 458231
Number of successful extensions: 1126
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1092
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1125
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2150453690
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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