Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP16_F_H12
(970 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 32 0.53
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 32 0.53
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 32 0.53
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 32 0.71
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 32 0.71
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 32 0.71
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 32 0.71
AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical ... 31 0.93
U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequen... 30 2.2
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 30 2.8
U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical p... 29 6.6
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 29 6.6
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 32.3 bits (70), Expect = 0.53
Identities = 27/88 (30%), Positives = 29/88 (32%), Gaps = 7/88 (7%)
Frame = +1
Query: 475 PPXKTXXPXFWGGGXXFSPPXGGGXXXPPXXGXPP----GKTFFXXGXXRXPXPKKGXXS 642
PP P G G PP G PP G PP G P P+ G
Sbjct: 240 PPPPKGSPPLAGSGSPPPPPAAGS-PPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSP- 297
Query: 643 XFFPXXPPPXGAXKN---YPXXXGGXPP 717
P PPP G+ P GG PP
Sbjct: 298 ---PPPPPPRGSPPTGSLPPPQAGGSPP 322
Score = 31.1 bits (67), Expect = 1.2
Identities = 20/68 (29%), Positives = 21/68 (30%)
Frame = +1
Query: 514 GXXFSPPXGGGXXXPPXXGXPPGKTFFXXGXXRXPXPKKGXXSXFFPXXPPPXGAXKNYP 693
G +PP G PP G PP P P G PPP P
Sbjct: 227 GKRQAPPAGSPPPPPPPKGSPP----LAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPP 282
Query: 694 XXXGGXPP 717
GG PP
Sbjct: 283 PPAGGSPP 290
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 32.3 bits (70), Expect = 0.53
Identities = 27/88 (30%), Positives = 29/88 (32%), Gaps = 7/88 (7%)
Frame = +1
Query: 475 PPXKTXXPXFWGGGXXFSPPXGGGXXXPPXXGXPP----GKTFFXXGXXRXPXPKKGXXS 642
PP P G G PP G PP G PP G P P+ G
Sbjct: 261 PPPPKGSPPLAGSGSPPPPPAAGS-PPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSP- 318
Query: 643 XFFPXXPPPXGAXKN---YPXXXGGXPP 717
P PPP G+ P GG PP
Sbjct: 319 ---PPPPPPRGSPPTGSLPPPQAGGSPP 343
Score = 31.1 bits (67), Expect = 1.2
Identities = 20/68 (29%), Positives = 21/68 (30%)
Frame = +1
Query: 514 GXXFSPPXGGGXXXPPXXGXPPGKTFFXXGXXRXPXPKKGXXSXFFPXXPPPXGAXKNYP 693
G +PP G PP G PP P P G PPP P
Sbjct: 248 GKRQAPPAGSPPPPPPPKGSPP----LAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPP 303
Query: 694 XXXGGXPP 717
GG PP
Sbjct: 304 PPAGGSPP 311
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 32.3 bits (70), Expect = 0.53
Identities = 27/88 (30%), Positives = 29/88 (32%), Gaps = 7/88 (7%)
Frame = +1
Query: 475 PPXKTXXPXFWGGGXXFSPPXGGGXXXPPXXGXPP----GKTFFXXGXXRXPXPKKGXXS 642
PP P G G PP G PP G PP G P P+ G
Sbjct: 246 PPPPKGSPPLAGSGSPPPPPAAGS-PPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSP- 303
Query: 643 XFFPXXPPPXGAXKN---YPXXXGGXPP 717
P PPP G+ P GG PP
Sbjct: 304 ---PPPPPPRGSPPTGSLPPPQAGGSPP 328
Score = 31.1 bits (67), Expect = 1.2
Identities = 20/68 (29%), Positives = 21/68 (30%)
Frame = +1
Query: 514 GXXFSPPXGGGXXXPPXXGXPPGKTFFXXGXXRXPXPKKGXXSXFFPXXPPPXGAXKNYP 693
G +PP G PP G PP P P G PPP P
Sbjct: 233 GKRQAPPAGSPPPPPPPKGSPP----LAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPP 288
Query: 694 XXXGGXPP 717
GG PP
Sbjct: 289 PPAGGSPP 296
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 31.9 bits (69), Expect = 0.71
Identities = 29/84 (34%), Positives = 29/84 (34%), Gaps = 3/84 (3%)
Frame = +1
Query: 475 PPXKTXX--PXFWGGGXXFSPPXGGGXXXPPXXGXPPGKTFFXXGXXRXPXPKKGXXSXF 648
PP K P GG PP GG PP G PP G P P G
Sbjct: 687 PPTKMNLSAPSTSAGGSSALPPITGGPPPPP--GLPP-----ITGGPPPPPPPGGLPPIT 739
Query: 649 F-PXXPPPXGAXKNYPXXXGGXPP 717
P PPP G P GG PP
Sbjct: 740 GGPPPPPPPGGL---PPISGGPPP 760
Score = 29.9 bits (64), Expect = 2.8
Identities = 22/67 (32%), Positives = 22/67 (32%)
Frame = +1
Query: 475 PPXKTXXPXFWGGGXXFSPPXGGGXXXPPXXGXPPGKTFFXXGXXRXPXPKKGXXSXFFP 654
PP P GG PP GG PP G PP G P P P
Sbjct: 729 PPPPGGLPPITGGPPP-PPPPGG---LPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGP 784
Query: 655 XXPPPXG 675
PPP G
Sbjct: 785 PPPPPPG 791
Score = 29.9 bits (64), Expect = 2.8
Identities = 17/38 (44%), Positives = 17/38 (44%), Gaps = 2/38 (5%)
Frame = -3
Query: 581 PGGXPXXGGX--XXPPPXGGEKXXPPPQNXGXXVFXGG 474
PGG P G PPP GG PPP G F GG
Sbjct: 748 PGGLPPISGGPPPPPPPPGGCPPPPPPPPPGG--FKGG 783
Score = 29.1 bits (62), Expect = 5.0
Identities = 23/70 (32%), Positives = 24/70 (34%)
Frame = -3
Query: 716 GGXPPXXXG*FLXAPXGGGXXGKNXXXXPFLGXGXLXXPXXKKVXPGGXPXXGGXXXPPP 537
GG PP L GG P + G P PGG P PPP
Sbjct: 724 GGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGG----PPPPPPPPGGCPPP---PPPPP 776
Query: 536 XGGEKXXPPP 507
GG K PPP
Sbjct: 777 PGGFKGGPPP 786
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 31.9 bits (69), Expect = 0.71
Identities = 29/84 (34%), Positives = 29/84 (34%), Gaps = 3/84 (3%)
Frame = +1
Query: 475 PPXKTXX--PXFWGGGXXFSPPXGGGXXXPPXXGXPPGKTFFXXGXXRXPXPKKGXXSXF 648
PP K P GG PP GG PP G PP G P P G
Sbjct: 687 PPTKMNLSAPSTSAGGSSALPPITGGPPPPP--GLPP-----ITGGPPPPPPPGGLPPIT 739
Query: 649 F-PXXPPPXGAXKNYPXXXGGXPP 717
P PPP G P GG PP
Sbjct: 740 GGPPPPPPPGGL---PPISGGPPP 760
Score = 29.9 bits (64), Expect = 2.8
Identities = 22/67 (32%), Positives = 22/67 (32%)
Frame = +1
Query: 475 PPXKTXXPXFWGGGXXFSPPXGGGXXXPPXXGXPPGKTFFXXGXXRXPXPKKGXXSXFFP 654
PP P GG PP GG PP G PP G P P P
Sbjct: 729 PPPPGGLPPITGGPPP-PPPPGG---LPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGP 784
Query: 655 XXPPPXG 675
PPP G
Sbjct: 785 PPPPPPG 791
Score = 29.9 bits (64), Expect = 2.8
Identities = 17/38 (44%), Positives = 17/38 (44%), Gaps = 2/38 (5%)
Frame = -3
Query: 581 PGGXPXXGGX--XXPPPXGGEKXXPPPQNXGXXVFXGG 474
PGG P G PPP GG PPP G F GG
Sbjct: 748 PGGLPPISGGPPPPPPPPGGCPPPPPPPPPGG--FKGG 783
Score = 29.1 bits (62), Expect = 5.0
Identities = 23/70 (32%), Positives = 24/70 (34%)
Frame = -3
Query: 716 GGXPPXXXG*FLXAPXGGGXXGKNXXXXPFLGXGXLXXPXXKKVXPGGXPXXGGXXXPPP 537
GG PP L GG P + G P PGG P PPP
Sbjct: 724 GGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGG----PPPPPPPPGGCPPP---PPPPP 776
Query: 536 XGGEKXXPPP 507
GG K PPP
Sbjct: 777 PGGFKGGPPP 786
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 31.9 bits (69), Expect = 0.71
Identities = 38/146 (26%), Positives = 41/146 (28%), Gaps = 3/146 (2%)
Frame = +1
Query: 250 PPPXXRXGKNXXFGXXGGXXXFXGPPXXXXKXFXPPXXXXFFXPXPGGGGGXFXXXXXXX 429
PPP + FG GPP F P F P P GG
Sbjct: 321 PPP--QGAPQQGFGAPPQGPPQGGPPQGS---FGAPPPQQFHAPSPQSFGGPPPPVSSAP 375
Query: 430 XXXXXXFCFWXPXXF--PPXKTXXPXFWGGGXXFSPPXGGGXXXPPXXGXPP-GKTFFXX 600
P F PP P GG + PP GG P G P G F
Sbjct: 376 GNFAPPPQSGPPGAFAPPPSAFGAPQGPGGPGGYGPPPPGGPGAPGSYGPPQGGPGGFGP 435
Query: 601 GXXRXPXPKKGXXSXFFPXXPPPXGA 678
P + F P PP GA
Sbjct: 436 PPPGGPGAYGPPPTGFPPVGAPPPGA 461
Score = 31.5 bits (68), Expect = 0.93
Identities = 19/57 (33%), Positives = 21/57 (36%), Gaps = 3/57 (5%)
Frame = +1
Query: 238 GGXGPPPXXRXGKNXXFG-XXGGXXXFXGPPXXXXKXFXPP--XXXXFFXPXPGGGG 399
GG GPPP G +G GG F PP + PP P PG G
Sbjct: 407 GGYGPPPPGGPGAPGSYGPPQGGPGGFGPPPPGGPGAYGPPPTGFPPVGAPPPGAAG 463
Score = 28.3 bits (60), Expect = 8.7
Identities = 22/76 (28%), Positives = 26/76 (34%), Gaps = 5/76 (6%)
Frame = +2
Query: 503 FGGGXXXSPPXXGGVXXXPQXXGXPXXKPFLXXGPX-GXLXPKRXXXXGF----SLXXPP 667
FGG PP G PQ P P G P + G S PP
Sbjct: 293 FGGPPPSGPPSEYGGYAPPQQQQQQFGAPPPQGAPQQGFGAPPQGPPQGGPPQGSFGAPP 352
Query: 668 PREHXKTTPXXXGGPP 715
P++ +P GGPP
Sbjct: 353 PQQFHAPSPQSFGGPP 368
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 31.9 bits (69), Expect = 0.71
Identities = 29/84 (34%), Positives = 29/84 (34%), Gaps = 3/84 (3%)
Frame = +1
Query: 475 PPXKTXX--PXFWGGGXXFSPPXGGGXXXPPXXGXPPGKTFFXXGXXRXPXPKKGXXSXF 648
PP K P GG PP GG PP G PP G P P G
Sbjct: 270 PPTKMNLSAPSTSAGGSSALPPITGGPPPPP--GLPP-----ITGGPPPPPPPGGLPPIT 322
Query: 649 F-PXXPPPXGAXKNYPXXXGGXPP 717
P PPP G P GG PP
Sbjct: 323 GGPPPPPPPGGL---PPISGGPPP 343
Score = 29.9 bits (64), Expect = 2.8
Identities = 22/67 (32%), Positives = 22/67 (32%)
Frame = +1
Query: 475 PPXKTXXPXFWGGGXXFSPPXGGGXXXPPXXGXPPGKTFFXXGXXRXPXPKKGXXSXFFP 654
PP P GG PP GG PP G PP G P P P
Sbjct: 312 PPPPGGLPPITGGPPP-PPPPGG---LPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGP 367
Query: 655 XXPPPXG 675
PPP G
Sbjct: 368 PPPPPPG 374
Score = 29.9 bits (64), Expect = 2.8
Identities = 17/38 (44%), Positives = 17/38 (44%), Gaps = 2/38 (5%)
Frame = -3
Query: 581 PGGXPXXGGX--XXPPPXGGEKXXPPPQNXGXXVFXGG 474
PGG P G PPP GG PPP G F GG
Sbjct: 331 PGGLPPISGGPPPPPPPPGGCPPPPPPPPPGG--FKGG 366
Score = 29.1 bits (62), Expect = 5.0
Identities = 23/70 (32%), Positives = 24/70 (34%)
Frame = -3
Query: 716 GGXPPXXXG*FLXAPXGGGXXGKNXXXXPFLGXGXLXXPXXKKVXPGGXPXXGGXXXPPP 537
GG PP L GG P + G P PGG P PPP
Sbjct: 307 GGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGG----PPPPPPPPGGCPPP---PPPPP 359
Query: 536 XGGEKXXPPP 507
GG K PPP
Sbjct: 360 PGGFKGGPPP 369
>AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical
protein T22D1.2 protein.
Length = 302
Score = 31.5 bits (68), Expect = 0.93
Identities = 24/72 (33%), Positives = 25/72 (34%), Gaps = 5/72 (6%)
Frame = +1
Query: 475 PPXKTXXPXFWGGGXXFS-----PPXGGGXXXPPXXGXPPGKTFFXXGXXRXPXPKKGXX 639
PP T P G S PP G G PP G P + R P P KG
Sbjct: 107 PPPPTGEPQDLSGEGNASRRPPPPPKGTGSPPPPPTGEPQDLSGEGNASRRPPPPPKGTG 166
Query: 640 SXFFPXXPPPXG 675
S PPP G
Sbjct: 167 S----PPPPPTG 174
Score = 31.5 bits (68), Expect = 0.93
Identities = 18/49 (36%), Positives = 19/49 (38%)
Frame = +1
Query: 529 PPXGGGXXXPPXXGXPPGKTFFXXGXXRXPXPKKGXXSXFFPXXPPPXG 675
PP G G PP G P + R P P KG S PPP G
Sbjct: 192 PPKGTGTPPPPPTGEPQDLSAEGYASRRPPPPPKGTGS----PTPPPTG 236
Score = 31.1 bits (67), Expect = 1.2
Identities = 18/49 (36%), Positives = 19/49 (38%)
Frame = +1
Query: 529 PPXGGGXXXPPXXGXPPGKTFFXXGXXRXPXPKKGXXSXFFPXXPPPXG 675
PP G G PP G P + R P P KG S PPP G
Sbjct: 99 PPKGTGTPPPPPTGEPQDLSGEGNASRRPPPPPKGTGS----PPPPPTG 143
Score = 31.1 bits (67), Expect = 1.2
Identities = 18/49 (36%), Positives = 19/49 (38%)
Frame = +1
Query: 529 PPXGGGXXXPPXXGXPPGKTFFXXGXXRXPXPKKGXXSXFFPXXPPPXG 675
PP G G PP G P + R P P KG S PPP G
Sbjct: 223 PPKGTGSPTPPPTGEPQDLSGEGNASRRPPPPPKGTGS----PPPPPTG 267
Score = 30.7 bits (66), Expect = 1.6
Identities = 23/72 (31%), Positives = 25/72 (34%), Gaps = 5/72 (6%)
Frame = +1
Query: 475 PPXKTXXPXFWGGGXXFS-----PPXGGGXXXPPXXGXPPGKTFFXXGXXRXPXPKKGXX 639
PP T P G S PP G G PP G P + R P P KG
Sbjct: 138 PPPPTGEPQDLSGEGNASRRPPPPPKGTGSPPPPPTGEPQDLSTEGNASRRPPPPPKGTG 197
Query: 640 SXFFPXXPPPXG 675
+ PPP G
Sbjct: 198 T----PPPPPTG 205
Score = 30.3 bits (65), Expect = 2.2
Identities = 18/59 (30%), Positives = 22/59 (37%)
Frame = +1
Query: 529 PPXGGGXXXPPXXGXPPGKTFFXXGXXRXPXPKKGXXSXFFPXXPPPXGAXKNYPXXXG 705
PP G G PP G P + R P P KG + PPP G ++ G
Sbjct: 36 PPKGTGTPPPPPTGEPQDLSGEGNASRRPPPPPKGTGT----PPPPPTGEPQDLSAEEG 90
Score = 29.5 bits (63), Expect = 3.8
Identities = 17/49 (34%), Positives = 19/49 (38%)
Frame = +1
Query: 529 PPXGGGXXXPPXXGXPPGKTFFXXGXXRXPXPKKGXXSXFFPXXPPPXG 675
PP G G PP G P + R P P KG + PPP G
Sbjct: 254 PPKGTGSPPPPPTGEPQDLSGEGNASRRPPPPPKGTGT-----PPPPTG 297
>U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequence
x-hybridizingprotein 1 protein.
Length = 589
Score = 30.3 bits (65), Expect = 2.2
Identities = 21/63 (33%), Positives = 21/63 (33%), Gaps = 1/63 (1%)
Frame = +3
Query: 531 PXXGGXXXP-PXXGGPPXXNLFXPRXPKGXXXQKGXXXXVFPSGXPPXGSX*KLPXXLGG 707
P GG P G PP P P G G PSG PP G P G
Sbjct: 206 PPSGGPTGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGP-PGPFNPSG 264
Query: 708 XPP 716
PP
Sbjct: 265 APP 267
Score = 30.3 bits (65), Expect = 2.2
Identities = 21/63 (33%), Positives = 21/63 (33%), Gaps = 1/63 (1%)
Frame = +3
Query: 531 PXXGGXXXP-PXXGGPPXXNLFXPRXPKGXXXQKGXXXXVFPSGXPPXGSX*KLPXXLGG 707
P GG P G PP P P G G PSG PP G P G
Sbjct: 236 PPSGGPPGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGP-PGPFDPSG 294
Query: 708 XPP 716
PP
Sbjct: 295 APP 297
Score = 30.3 bits (65), Expect = 2.2
Identities = 21/63 (33%), Positives = 21/63 (33%), Gaps = 1/63 (1%)
Frame = +3
Query: 531 PXXGGXXXP-PXXGGPPXXNLFXPRXPKGXXXQKGXXXXVFPSGXPPXGSX*KLPXXLGG 707
P GG P G PP P P G G PSG PP G P G
Sbjct: 281 PPSGGPPGPFDPSGAPPSGGPPGPFDPSGAQPSGGPPGPFNPSGAPPSGGP-PGPFDPSG 339
Query: 708 XPP 716
PP
Sbjct: 340 APP 342
Score = 30.3 bits (65), Expect = 2.2
Identities = 21/63 (33%), Positives = 21/63 (33%), Gaps = 1/63 (1%)
Frame = +3
Query: 531 PXXGGXXXP-PXXGGPPXXNLFXPRXPKGXXXQKGXXXXVFPSGXPPXGSX*KLPXXLGG 707
P GG P G PP P P G G PSG PP G P G
Sbjct: 326 PPSGGPPGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGP-PGPFDPSG 384
Query: 708 XPP 716
PP
Sbjct: 385 APP 387
Score = 30.3 bits (65), Expect = 2.2
Identities = 21/63 (33%), Positives = 21/63 (33%), Gaps = 1/63 (1%)
Frame = +3
Query: 531 PXXGGXXXP-PXXGGPPXXNLFXPRXPKGXXXQKGXXXXVFPSGXPPXGSX*KLPXXLGG 707
P GG P G PP P P G G PSG PP G P G
Sbjct: 356 PPSGGPPGPFDPSGAPPSGGPPGPFDPSGAPPSGGPPGPFDPSGAPPSGGP-PGPFNPSG 414
Query: 708 XPP 716
PP
Sbjct: 415 APP 417
Score = 30.3 bits (65), Expect = 2.2
Identities = 21/63 (33%), Positives = 21/63 (33%), Gaps = 1/63 (1%)
Frame = +3
Query: 531 PXXGGXXXP-PXXGGPPXXNLFXPRXPKGXXXQKGXXXXVFPSGXPPXGSX*KLPXXLGG 707
P GG P G PP P P G G PSG PP G P G
Sbjct: 371 PPSGGPPGPFDPSGAPPSGGPPGPFDPSGAPPSGGPPGPFNPSGAPPSGGP-PGPFNPSG 429
Query: 708 XPP 716
PP
Sbjct: 430 APP 432
Score = 30.3 bits (65), Expect = 2.2
Identities = 21/63 (33%), Positives = 21/63 (33%), Gaps = 1/63 (1%)
Frame = +3
Query: 531 PXXGGXXXP-PXXGGPPXXNLFXPRXPKGXXXQKGXXXXVFPSGXPPXGSX*KLPXXLGG 707
P GG P G PP P P G G PSG PP G P G
Sbjct: 386 PPSGGPPGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGGP-PGPFNPSG 444
Query: 708 XPP 716
PP
Sbjct: 445 APP 447
Score = 29.9 bits (64), Expect = 2.8
Identities = 21/63 (33%), Positives = 21/63 (33%), Gaps = 1/63 (1%)
Frame = +3
Query: 531 PXXGGXXXP-PXXGGPPXXNLFXPRXPKGXXXQKGXXXXVFPSGXPPXGSX*KLPXXLGG 707
P GG P G PP P P G G PSG PP G P G
Sbjct: 221 PPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFNPSGAPPSGGP-PGPFDPSG 279
Query: 708 XPP 716
PP
Sbjct: 280 APP 282
Score = 29.9 bits (64), Expect = 2.8
Identities = 21/63 (33%), Positives = 21/63 (33%)
Frame = +3
Query: 528 PPXXGGXXXPPXXGGPPXXNLFXPRXPKGXXXQKGXXXXVFPSGXPPXGSX*KLPXXLGG 707
PP P GGPP P P G G PSG PP G P G
Sbjct: 316 PPGPFNPSGAPPSGGPPG-----PFDPSGAPPSGGPPGPFNPSGAPPSGGP-PGPFDPSG 369
Query: 708 XPP 716
PP
Sbjct: 370 APP 372
Score = 29.9 bits (64), Expect = 2.8
Identities = 21/63 (33%), Positives = 21/63 (33%), Gaps = 1/63 (1%)
Frame = +3
Query: 531 PXXGGXXXP-PXXGGPPXXNLFXPRXPKGXXXQKGXXXXVFPSGXPPXGSX*KLPXXLGG 707
P GG P G PP P P G G PSG PP G P G
Sbjct: 341 PPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFDPSGAPPSGGP-PGPFDPSG 399
Query: 708 XPP 716
PP
Sbjct: 400 APP 402
Score = 29.9 bits (64), Expect = 2.8
Identities = 21/63 (33%), Positives = 21/63 (33%), Gaps = 1/63 (1%)
Frame = +3
Query: 531 PXXGGXXXP-PXXGGPPXXNLFXPRXPKGXXXQKGXXXXVFPSGXPPXGSX*KLPXXLGG 707
P GG P G PP P P G G PSG PP G P G
Sbjct: 401 PPSGGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGGP-PGPFNPSG 459
Query: 708 XPP 716
PP
Sbjct: 460 APP 462
Score = 29.9 bits (64), Expect = 2.8
Identities = 21/63 (33%), Positives = 21/63 (33%), Gaps = 1/63 (1%)
Frame = +3
Query: 531 PXXGGXXXP-PXXGGPPXXNLFXPRXPKGXXXQKGXXXXVFPSGXPPXGSX*KLPXXLGG 707
P GG P G PP P P G G PSG PP G P G
Sbjct: 416 PPSGGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGGP-PGPFNPSG 474
Query: 708 XPP 716
PP
Sbjct: 475 APP 477
Score = 29.9 bits (64), Expect = 2.8
Identities = 21/63 (33%), Positives = 21/63 (33%), Gaps = 1/63 (1%)
Frame = +3
Query: 531 PXXGGXXXP-PXXGGPPXXNLFXPRXPKGXXXQKGXXXXVFPSGXPPXGSX*KLPXXLGG 707
P GG P G PP P P G G PSG PP G P G
Sbjct: 431 PPSGGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGGP-PGPFDPSG 489
Query: 708 XPP 716
PP
Sbjct: 490 APP 492
Score = 29.9 bits (64), Expect = 2.8
Identities = 21/63 (33%), Positives = 21/63 (33%), Gaps = 1/63 (1%)
Frame = +3
Query: 531 PXXGGXXXP-PXXGGPPXXNLFXPRXPKGXXXQKGXXXXVFPSGXPPXGSX*KLPXXLGG 707
P GG P G PP P P G G PSG PP G P G
Sbjct: 446 PPSGGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGP-PGPFNPSG 504
Query: 708 XPP 716
PP
Sbjct: 505 APP 507
Score = 29.9 bits (64), Expect = 2.8
Identities = 21/63 (33%), Positives = 21/63 (33%), Gaps = 1/63 (1%)
Frame = +3
Query: 531 PXXGGXXXP-PXXGGPPXXNLFXPRXPKGXXXQKGXXXXVFPSGXPPXGSX*KLPXXLGG 707
P GG P G PP P P G G PSG PP G P G
Sbjct: 461 PPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFNPSGAPPSGGP-PGPFDPSG 519
Query: 708 XPP 716
PP
Sbjct: 520 APP 522
Score = 29.1 bits (62), Expect = 5.0
Identities = 21/63 (33%), Positives = 21/63 (33%)
Frame = +3
Query: 528 PPXXGGXXXPPXXGGPPXXNLFXPRXPKGXXXQKGXXXXVFPSGXPPXGSX*KLPXXLGG 707
PP G P GGPP P P G PSG PP G P G
Sbjct: 181 PPGPFGPSGAPPSGGPPG-----PFNPSEAPPSGGPTGPFDPSGAPPSGGP-PGPFNPSG 234
Query: 708 XPP 716
PP
Sbjct: 235 APP 237
Score = 28.7 bits (61), Expect = 6.6
Identities = 17/49 (34%), Positives = 17/49 (34%), Gaps = 1/49 (2%)
Frame = +3
Query: 531 PXXGGXXXP-PXXGGPPXXNLFXPRXPKGXXXQKGXXXXVFPSGXPPXG 674
P GG P G PP P P G G PSG PP G
Sbjct: 476 PPSGGPPGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSG 524
Score = 28.3 bits (60), Expect = 8.7
Identities = 17/49 (34%), Positives = 17/49 (34%), Gaps = 1/49 (2%)
Frame = +3
Query: 531 PXXGGXXXP-PXXGGPPXXNLFXPRXPKGXXXQKGXXXXVFPSGXPPXG 674
P GG P G PP P P G G PSG PP G
Sbjct: 251 PPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFDPSGAPPSG 299
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 29.9 bits (64), Expect = 2.8
Identities = 15/39 (38%), Positives = 17/39 (43%), Gaps = 2/39 (5%)
Frame = +2
Query: 605 PXGXLXPKRXXXXGFSLXXPPPR--EHXKTTPXXXGGPP 715
P G L P G+ PPPR H + P GGPP
Sbjct: 1555 PMGGLPPPHGGMNGWRGGPPPPRGGSHCQGPPPLMGGPP 1593
>U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical
protein F25B5.7c protein.
Length = 282
Score = 28.7 bits (61), Expect = 6.6
Identities = 21/67 (31%), Positives = 23/67 (34%)
Frame = -3
Query: 713 GXPPXXXG*FLXAPXGGGXXGKNXXXXPFLGXGXLXXPXXKKVXPGGXPXXGGXXXPPPX 534
G PP F AP G P +G G P GG P GG PP
Sbjct: 131 GGPPPFGQPFQQAPQG--MFNVPTGPPPLMGGGG--DPRGPPGGMGGPPGHGGMGGPPGH 186
Query: 533 GGEKXXP 513
GG+ P
Sbjct: 187 GGQGGPP 193
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 28.7 bits (61), Expect = 6.6
Identities = 21/67 (31%), Positives = 23/67 (34%)
Frame = -3
Query: 713 GXPPXXXG*FLXAPXGGGXXGKNXXXXPFLGXGXLXXPXXKKVXPGGXPXXGGXXXPPPX 534
G PP F AP G P +G G P GG P GG PP
Sbjct: 411 GGPPPFGQPFQQAPQG--MFNVPTGPPPLMGGGG--DPRGPPGGMGGPPGHGGMGGPPGH 466
Query: 533 GGEKXXP 513
GG+ P
Sbjct: 467 GGQGGPP 473
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,241,058
Number of Sequences: 27780
Number of extensions: 208160
Number of successful extensions: 1493
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 499
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1216
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2510937120
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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