Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP16_F_H09
         (893 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U88168-2|AAC24398.1|  108|Caenorhabditis elegans Hypothetical pr...   109   3e-24
Z81120-6|CAH10814.1|   98|Caenorhabditis elegans Hypothetical pr...    45   8e-05
AL132876-10|CAC48129.1|  106|Caenorhabditis elegans Hypothetical...    35   0.090
Z83316-6|CAD30429.2|  491|Caenorhabditis elegans Hypothetical pr...    28   7.8  
Z69636-1|CAA93465.2| 1180|Caenorhabditis elegans Hypothetical pr...    28   7.8  
AL032636-1|CAA21605.1|  343|Caenorhabditis elegans Hypothetical ...    28   7.8  

>U88168-2|AAC24398.1|  108|Caenorhabditis elegans Hypothetical
           protein K11H12.1 protein.
          Length = 108

 Score =  109 bits (262), Expect = 3e-24
 Identities = 56/110 (50%), Positives = 75/110 (68%), Gaps = 1/110 (0%)
 Frame = +3

Query: 204 MSSAS-GIVESTIRNKLLTILESKHVQVINESYMHNVPKGAETHFKVVVVSEKFDGLPLI 380
           MS+ S G V   ++ KL    + KH++V  ES++HNVPKGAE HF+V VVS++F+G  +I
Sbjct: 1   MSTLSEGPVARLLKEKLFAAFQPKHLEVECESHLHNVPKGAEKHFRVQVVSDEFEGKRVI 60

Query: 381 KRHRLVNELLAEELQNGVHALSIVAKTPKQWEESDKLVENSPNCRGGFGK 530
           +RHRLVN  LA+EL   VHAL I A    +W+   +  E+SP CRGGFGK
Sbjct: 61  ERHRLVNTCLAKELATTVHALRIDAIPTSKWDGQKQ--EDSPTCRGGFGK 108


>Z81120-6|CAH10814.1|   98|Caenorhabditis elegans Hypothetical
           protein T12D8.10 protein.
          Length = 98

 Score = 44.8 bits (101), Expect = 8e-05
 Identities = 21/61 (34%), Positives = 36/61 (59%)
 Frame = +3

Query: 333 FKVVVVSEKFDGLPLIKRHRLVNELLAEELQNGVHALSIVAKTPKQWEESDKLVENSPNC 512
           F++++VSE F+G   ++ HRLV   LA  + +  HAL+I A TP++W +       +  C
Sbjct: 35  FRLLIVSEAFEGKCTLQSHRLVQAALA-PIMDETHALTICAYTPERWSQMTTEDRQNAGC 93

Query: 513 R 515
           +
Sbjct: 94  Q 94


>AL132876-10|CAC48129.1|  106|Caenorhabditis elegans Hypothetical
           protein Y105E8A.11 protein.
          Length = 106

 Score = 34.7 bits (76), Expect = 0.090
 Identities = 17/53 (32%), Positives = 31/53 (58%)
 Frame = +3

Query: 300 MHNVPKGAETHFKVVVVSEKFDGLPLIKRHRLVNELLAEELQNGVHALSIVAK 458
           +H+V  G  + F VVV +  F G   + +H+ V  +L E++++ +H L+I  K
Sbjct: 53  VHDVSNGCGSMFDVVVEAAGFKGKSKVAQHKQVTSILREQIKD-MHGLTIKTK 104


>Z83316-6|CAD30429.2|  491|Caenorhabditis elegans Hypothetical
           protein B0379.4b protein.
          Length = 491

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 17/43 (39%), Positives = 23/43 (53%)
 Frame = -2

Query: 445 DSACTPF*SSSANSSLTKRCLFIRGKPSNFSETTTTLKCVSAP 317
           D+A TP  S SAN+S+ K+    R KP  ++    TL C   P
Sbjct: 174 DTASTPLNSFSANASIEKKRSTARRKP-RWARCFQTLFCCVTP 215


>Z69636-1|CAA93465.2| 1180|Caenorhabditis elegans Hypothetical protein
            F20B10.1 protein.
          Length = 1180

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 14/21 (66%), Positives = 17/21 (80%)
 Frame = -1

Query: 650  EFNPQNDLISMTIKKTSSTQD 588
            +FNPQ DLIS TIK  +ST+D
Sbjct: 1074 DFNPQPDLISSTIK--TSTED 1092


>AL032636-1|CAA21605.1|  343|Caenorhabditis elegans Hypothetical
           protein Y40B1B.3 protein.
          Length = 343

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 12/18 (66%), Positives = 13/18 (72%)
 Frame = +2

Query: 533 NYTREQKFGITCLRLIPR 586
           NYTRE  F I CLRL+ R
Sbjct: 175 NYTREVDFQIHCLRLVTR 192


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,561,364
Number of Sequences: 27780
Number of extensions: 309371
Number of successful extensions: 857
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 823
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 855
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2265843888
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)