Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP16_F_H07
(933 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 36 0.041
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 36 0.041
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 34 0.13
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 34 0.13
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 34 0.13
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 34 0.13
Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical pr... 34 0.17
L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein. 34 0.17
U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequen... 33 0.29
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 32 0.51
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 31 0.89
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 31 0.89
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 31 1.2
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 31 1.2
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 31 1.2
AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical ... 31 1.6
U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical pr... 30 2.1
U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical pr... 30 2.1
AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily a... 30 2.1
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 30 2.7
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 29 3.6
AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily a... 29 4.8
AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily a... 29 4.8
Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical pr... 29 6.3
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 29 6.3
Z81034-4|CAB02729.1| 541|Caenorhabditis elegans Hypothetical pr... 28 8.3
AL023835-10|CAA19494.2| 691|Caenorhabditis elegans Hypothetical... 28 8.3
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 35.9 bits (79), Expect = 0.041
Identities = 19/54 (35%), Positives = 19/54 (35%)
Frame = -2
Query: 599 PPXSXXXVGXPXXPXXXXRXXXPGXXXXGPKXXPPRPPXGXXFXKTXXPPPPPP 438
PP G P P PG P PP PP G PPPPPP
Sbjct: 338 PPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPPSGHGM----IPPPPPP 387
Score = 31.5 bits (68), Expect = 0.89
Identities = 16/53 (30%), Positives = 17/53 (32%)
Frame = -2
Query: 599 PPXSXXXVGXPXXPXXXXRXXXPGXXXXGPKXXPPRPPXGXXFXKTXXPPPPP 441
PP G P P G PP PP G + PPPPP
Sbjct: 301 PPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPP 353
Score = 30.3 bits (65), Expect = 2.1
Identities = 18/56 (32%), Positives = 19/56 (33%), Gaps = 2/56 (3%)
Frame = -2
Query: 599 PPXSXXXVGXPXXPXXXXRXXXPGXXXXGPKXXPPRPPXGXXFXKTXXP--PPPPP 438
PP S + P P P G PP PP G P PPPPP
Sbjct: 266 PPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPP 321
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 35.9 bits (79), Expect = 0.041
Identities = 19/54 (35%), Positives = 19/54 (35%)
Frame = -2
Query: 599 PPXSXXXVGXPXXPXXXXRXXXPGXXXXGPKXXPPRPPXGXXFXKTXXPPPPPP 438
PP G P P PG P PP PP G PPPPPP
Sbjct: 348 PPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPPSGHGM----IPPPPPP 397
Score = 31.5 bits (68), Expect = 0.89
Identities = 16/53 (30%), Positives = 17/53 (32%)
Frame = -2
Query: 599 PPXSXXXVGXPXXPXXXXRXXXPGXXXXGPKXXPPRPPXGXXFXKTXXPPPPP 441
PP G P P G PP PP G + PPPPP
Sbjct: 311 PPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPP 363
Score = 30.3 bits (65), Expect = 2.1
Identities = 18/56 (32%), Positives = 19/56 (33%), Gaps = 2/56 (3%)
Frame = -2
Query: 599 PPXSXXXVGXPXXPXXXXRXXXPGXXXXGPKXXPPRPPXGXXFXKTXXP--PPPPP 438
PP S + P P P G PP PP G P PPPPP
Sbjct: 276 PPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPP 331
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 34.3 bits (75), Expect = 0.13
Identities = 22/83 (26%), Positives = 24/83 (28%)
Frame = -1
Query: 651 PXXXSRXXPALXXKXXFPPXFPXXXGXPXXPLXXXPXXFXGXXXXGPKKXPPPXPXGXPX 472
P S P + PP P G P P PPP P P
Sbjct: 473 PGPPSSLLPLINTNAPPPPPMPSINGHAPNPPPPPPLLGIAPMSTNAPP-PPPMPGMAPL 531
Query: 471 X*NEXTPPPPPXLXXXKXSXPCP 403
TPPPPP + P P
Sbjct: 532 STGAPTPPPPPPVGMANGGPPPP 554
Score = 26.6 bits (56), Expect(2) = 3.1
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = -2
Query: 515 GPKXXPPRPPXGXXFXKTXXPPPPPP 438
G PP PP G PPPPPP
Sbjct: 534 GAPTPPPPPPVG---MANGGPPPPPP 556
Score = 21.4 bits (43), Expect(2) = 3.1
Identities = 7/12 (58%), Positives = 7/12 (58%)
Frame = -2
Query: 455 PPPPPPXXXXXN 420
PPPPPP N
Sbjct: 579 PPPPPPPSFMFN 590
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 34.3 bits (75), Expect = 0.13
Identities = 15/40 (37%), Positives = 15/40 (37%)
Frame = +1
Query: 718 PPPPGXXPXKGXXXXXGGXAXXXXXXXXXPXXPPPGGXPP 837
PPPPG P G P PPPGG PP
Sbjct: 714 PPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPP 753
Score = 32.3 bits (70), Expect = 0.51
Identities = 22/75 (29%), Positives = 23/75 (30%)
Frame = -2
Query: 626 PPFXXXXXFPPXSXXXVGXPXXPXXXXRXXXPGXXXXGPKXXPPRPPXGXXFXKTXXPPP 447
PP PP G P P PG PP PP G + PPP
Sbjct: 707 PPITGGPPPPPGLPPITGGPPPPPP------PGGLPPITGGPPPPPPPGGLPPISGGPPP 760
Query: 446 PPPXXXXXNXPXLAP 402
PPP P P
Sbjct: 761 PPPPPGGCPPPPPPP 775
Score = 29.5 bits (63), Expect = 3.6
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = -1
Query: 501 PPPXPXGXPXX*NEXTPPPPP 439
PPP P G P PPPPP
Sbjct: 728 PPPPPGGLPPITGGPPPPPPP 748
Score = 28.7 bits (61), Expect = 6.3
Identities = 15/42 (35%), Positives = 15/42 (35%), Gaps = 2/42 (4%)
Frame = +1
Query: 718 PPPPGXXPX--KGXXXXXGGXAXXXXXXXXXPXXPPPGGXPP 837
PPPPG P G P PPPGG PP
Sbjct: 729 PPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPP 770
Score = 28.7 bits (61), Expect = 6.3
Identities = 12/32 (37%), Positives = 13/32 (40%)
Frame = -3
Query: 499 PPXPXXAPXFXKRXXPPPPPXSXXXKTFPPLP 404
PP P P K PPPPP P +P
Sbjct: 770 PPPPPPPPGGFKGGPPPPPPPGMFAPMAPVIP 801
Score = 28.3 bits (60), Expect = 8.3
Identities = 14/32 (43%), Positives = 14/32 (43%)
Frame = -2
Query: 533 PGXXXXGPKXXPPRPPXGXXFXKTXXPPPPPP 438
P G PP PP G K PPPPPP
Sbjct: 761 PPPPPGGCPPPPPPPPPGG--FKGGPPPPPPP 790
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 34.3 bits (75), Expect = 0.13
Identities = 15/40 (37%), Positives = 15/40 (37%)
Frame = +1
Query: 718 PPPPGXXPXKGXXXXXGGXAXXXXXXXXXPXXPPPGGXPP 837
PPPPG P G P PPPGG PP
Sbjct: 714 PPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPP 753
Score = 32.3 bits (70), Expect = 0.51
Identities = 22/75 (29%), Positives = 23/75 (30%)
Frame = -2
Query: 626 PPFXXXXXFPPXSXXXVGXPXXPXXXXRXXXPGXXXXGPKXXPPRPPXGXXFXKTXXPPP 447
PP PP G P P PG PP PP G + PPP
Sbjct: 707 PPITGGPPPPPGLPPITGGPPPPPP------PGGLPPITGGPPPPPPPGGLPPISGGPPP 760
Query: 446 PPPXXXXXNXPXLAP 402
PPP P P
Sbjct: 761 PPPPPGGCPPPPPPP 775
Score = 29.5 bits (63), Expect = 3.6
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = -1
Query: 501 PPPXPXGXPXX*NEXTPPPPP 439
PPP P G P PPPPP
Sbjct: 728 PPPPPGGLPPITGGPPPPPPP 748
Score = 28.7 bits (61), Expect = 6.3
Identities = 15/42 (35%), Positives = 15/42 (35%), Gaps = 2/42 (4%)
Frame = +1
Query: 718 PPPPGXXPX--KGXXXXXGGXAXXXXXXXXXPXXPPPGGXPP 837
PPPPG P G P PPPGG PP
Sbjct: 729 PPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPP 770
Score = 28.7 bits (61), Expect = 6.3
Identities = 12/32 (37%), Positives = 13/32 (40%)
Frame = -3
Query: 499 PPXPXXAPXFXKRXXPPPPPXSXXXKTFPPLP 404
PP P P K PPPPP P +P
Sbjct: 770 PPPPPPPPGGFKGGPPPPPPPGMFAPMAPVIP 801
Score = 28.3 bits (60), Expect = 8.3
Identities = 14/32 (43%), Positives = 14/32 (43%)
Frame = -2
Query: 533 PGXXXXGPKXXPPRPPXGXXFXKTXXPPPPPP 438
P G PP PP G K PPPPPP
Sbjct: 761 PPPPPGGCPPPPPPPPPGG--FKGGPPPPPPP 790
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 34.3 bits (75), Expect = 0.13
Identities = 15/40 (37%), Positives = 15/40 (37%)
Frame = +1
Query: 718 PPPPGXXPXKGXXXXXGGXAXXXXXXXXXPXXPPPGGXPP 837
PPPPG P G P PPPGG PP
Sbjct: 297 PPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPP 336
Score = 32.3 bits (70), Expect = 0.51
Identities = 22/75 (29%), Positives = 23/75 (30%)
Frame = -2
Query: 626 PPFXXXXXFPPXSXXXVGXPXXPXXXXRXXXPGXXXXGPKXXPPRPPXGXXFXKTXXPPP 447
PP PP G P P PG PP PP G + PPP
Sbjct: 290 PPITGGPPPPPGLPPITGGPPPPPP------PGGLPPITGGPPPPPPPGGLPPISGGPPP 343
Query: 446 PPPXXXXXNXPXLAP 402
PPP P P
Sbjct: 344 PPPPPGGCPPPPPPP 358
Score = 29.5 bits (63), Expect = 3.6
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = -1
Query: 501 PPPXPXGXPXX*NEXTPPPPP 439
PPP P G P PPPPP
Sbjct: 311 PPPPPGGLPPITGGPPPPPPP 331
Score = 28.7 bits (61), Expect = 6.3
Identities = 15/42 (35%), Positives = 15/42 (35%), Gaps = 2/42 (4%)
Frame = +1
Query: 718 PPPPGXXPX--KGXXXXXGGXAXXXXXXXXXPXXPPPGGXPP 837
PPPPG P G P PPPGG PP
Sbjct: 312 PPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPP 353
Score = 28.7 bits (61), Expect = 6.3
Identities = 12/32 (37%), Positives = 13/32 (40%)
Frame = -3
Query: 499 PPXPXXAPXFXKRXXPPPPPXSXXXKTFPPLP 404
PP P P K PPPPP P +P
Sbjct: 353 PPPPPPPPGGFKGGPPPPPPPGMFAPMAPVIP 384
Score = 28.3 bits (60), Expect = 8.3
Identities = 14/32 (43%), Positives = 14/32 (43%)
Frame = -2
Query: 533 PGXXXXGPKXXPPRPPXGXXFXKTXXPPPPPP 438
P G PP PP G K PPPPPP
Sbjct: 344 PPPPPGGCPPPPPPPPPGG--FKGGPPPPPPP 373
>Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical
protein C02C6.1a protein.
Length = 830
Score = 33.9 bits (74), Expect = 0.17
Identities = 15/40 (37%), Positives = 15/40 (37%)
Frame = +1
Query: 718 PPPPGXXPXKGXXXXXGGXAXXXXXXXXXPXXPPPGGXPP 837
PPPPG P G GG P PPP PP
Sbjct: 790 PPPPGMRPPPGAPGGGGGMYPPLIPTRPGPGGPPPNMAPP 829
>L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein.
Length = 830
Score = 33.9 bits (74), Expect = 0.17
Identities = 15/40 (37%), Positives = 15/40 (37%)
Frame = +1
Query: 718 PPPPGXXPXKGXXXXXGGXAXXXXXXXXXPXXPPPGGXPP 837
PPPPG P G GG P PPP PP
Sbjct: 790 PPPPGMRPPPGAPGGGGGMYPPLIPTRPGPGGPPPNMAPP 829
>U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequence
x-hybridizingprotein 1 protein.
Length = 589
Score = 33.1 bits (72), Expect = 0.29
Identities = 36/148 (24%), Positives = 40/148 (27%), Gaps = 5/148 (3%)
Frame = -1
Query: 870 PXXGXXXXXXXRGXPPXGGXPG-XXXXGGXPGGXPPXXXXXXFXGXXPXG--RGPXXXTX 700
P G G PP GG PG G P G PP G P G GP +
Sbjct: 432 PSGGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPGPFNP--SGAPPSGGPPGPFDPSG 489
Query: 699 XXXGGXXXWXXXXXXGPXXXSRXXPALXXKXXFPPXFPXXXGXPXXPLXXXPXXFXGXXX 520
G P P P P P+ F
Sbjct: 490 APPSGGPPGPFNPSGAPPSGGPPGP-FDPSGAPPSGMPPVPLPTDLPIPSESPSFFQWIF 548
Query: 519 XGPKKXPP--PXPXGXPXX*NEXTPPPP 442
PK P P P G P + + PPP
Sbjct: 549 GRPKPSGPAGPAPSGEPPGPFDPSGPPP 576
Score = 31.1 bits (67), Expect = 1.2
Identities = 38/150 (25%), Positives = 42/150 (28%), Gaps = 3/150 (2%)
Frame = -1
Query: 882 SPXXPXXGXXXXXXXRGXPPXGGXPG-XXXXGGXPGGXPPXXXXXXFXGXXPXG--RGPX 712
S P G G PP GG PG G P G PP G P G GP
Sbjct: 203 SEAPPSGGPTGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFDP--SGAPPSGGPPGPF 260
Query: 711 XXTXXXXGGXXXWXXXXXXGPXXXSRXXPALXXKXXFPPXFPXXXGXPXXPLXXXPXXFX 532
+ G GP S P+ F P G P P
Sbjct: 261 NPSGAPPSG-------GPPGPFDPSGAPPSGGPPGPFDPSGAPPSGGPPGPFDPSGAQPS 313
Query: 531 GXXXXGPKKXPPPXPXGXPXX*NEXTPPPP 442
G GP P G P + + PP
Sbjct: 314 G-GPPGPFNPSGAPPSGGPPGPFDPSGAPP 342
Score = 30.3 bits (65), Expect = 2.1
Identities = 32/131 (24%), Positives = 33/131 (25%), Gaps = 1/131 (0%)
Frame = -1
Query: 834 GXPPXGGXPG-XXXXGGXPGGXPPXXXXXXFXGXXPXGRGPXXXTXXXXGGXXXWXXXXX 658
G PP GG PG G P G PP P G P G
Sbjct: 144 GAPPSGGPPGPFDPSGAPPSGGPPGL-------FDPSGAPPSGGPPGPFGPSGAPPSGGP 196
Query: 657 XGPXXXSRXXPALXXKXXFPPXFPXXXGXPXXPLXXXPXXFXGXXXXGPKKXPPPXPXGX 478
GP S P+ F P G P P G P G
Sbjct: 197 PGPFNPSEAPPSGGPTGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGP 256
Query: 477 PXX*NEXTPPP 445
P N PP
Sbjct: 257 PGPFNPSGAPP 267
Score = 30.3 bits (65), Expect = 2.1
Identities = 37/146 (25%), Positives = 41/146 (28%), Gaps = 3/146 (2%)
Frame = -1
Query: 870 PXXGXXXXXXXRGXPPXGGXPG-XXXXGGXPGGXPPXXXXXXFXGXXPXG--RGPXXXTX 700
P G G PP GG PG G P G PP G P G GP +
Sbjct: 147 PSGGPPGPFDPSGAPPSGGPPGLFDPSGAPPSGGPPGPFGP--SGAPPSGGPPGPFNPSE 204
Query: 699 XXXGGXXXWXXXXXXGPXXXSRXXPALXXKXXFPPXFPXXXGXPXXPLXXXPXXFXGXXX 520
G GP S P+ F P G P P G
Sbjct: 205 APPSG-------GPTGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSG-GP 256
Query: 519 XGPKKXPPPXPXGXPXX*NEXTPPPP 442
GP P G P + + PP
Sbjct: 257 PGPFNPSGAPPSGGPPGPFDPSGAPP 282
Score = 29.9 bits (64), Expect = 2.7
Identities = 36/145 (24%), Positives = 38/145 (26%), Gaps = 3/145 (2%)
Frame = -1
Query: 870 PXXGXXXXXXXRGXPPXGGXPG-XXXXGGXPGGXPPXXXXXXFXGXXPXG--RGPXXXTX 700
P G G PP GG PG G P G PP G P G GP +
Sbjct: 312 PSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFNP--SGAPPSGGPPGPFDPSG 369
Query: 699 XXXGGXXXWXXXXXXGPXXXSRXXPALXXKXXFPPXFPXXXGXPXXPLXXXPXXFXGXXX 520
G GP S P+ F P G P P G
Sbjct: 370 APPSG-------GPPGPFDPSGAPPSGGPPGPFDPSGAPPSGGPPGPFNPSGAPPSGGPP 422
Query: 519 XGPKKXPPPXPXGXPXX*NEXTPPP 445
P G P N PP
Sbjct: 423 GPFNPSGAPPSGGPPGPFNPSGAPP 447
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 32.3 bits (70), Expect = 0.51
Identities = 20/66 (30%), Positives = 22/66 (33%)
Frame = -1
Query: 600 PPXFPXXXGXPXXPLXXXPXXFXGXXXXGPKKXPPPXPXGXPXX*NEXTPPPPPXLXXXK 421
PP P P P P P PPP P P + PPPPP L +
Sbjct: 1344 PPPPPSDDLTPVPPPPPPPPTMSKAPTGVPLPVPPPPPLFSP---SMILPPPPPPLPSEE 1400
Query: 420 XSXPCP 403
P P
Sbjct: 1401 KKNPLP 1406
Score = 30.3 bits (65), Expect = 2.1
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = -2
Query: 512 PKXXPPRPPXGXXFXKTXXPPPPPP 438
P PP PP PPPPPP
Sbjct: 1339 PPPPPPPPPPSDDLTPVPPPPPPPP 1363
Score = 29.5 bits (63), Expect = 3.6
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = -2
Query: 500 PPRPPXGXXFXKTXXPPPPPPXXXXXNXPXLAP 402
PP PP T PPPPPP P P
Sbjct: 1341 PPPPPPPPSDDLTPVPPPPPPPPTMSKAPTGVP 1373
Score = 28.3 bits (60), Expect = 8.3
Identities = 33/135 (24%), Positives = 37/135 (27%), Gaps = 4/135 (2%)
Frame = -1
Query: 837 RGXPPXGGXPGXXXXGGXPGGXPPXXXXXXFXGXXPXGRG---PXXXTXXXXGGXXXWXX 667
RG PP G P G G PP G P RG P GG +
Sbjct: 1448 RGGPPMRGMPPLGMMRGRGGPPPPRGMNSPMRGMPPPMRGGGPPMRGGPPMRGGPPMF-- 1505
Query: 666 XXXXGPXXXSRXXPA-LXXKXXFPPXFPXXXGXPXXPLXXXPXXFXGXXXXGPKKXPPPX 490
GP R P+ + FP G P + GP P
Sbjct: 1506 --RGGPPGPGRGMPSPMMRGSSMRGGFPQRGGGPG--MGPSQYYHDSPQNRGPPMGGLPP 1561
Query: 489 PXGXPXX*NEXTPPP 445
P G PPP
Sbjct: 1562 PHGGMNGWRGGPPPP 1576
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 31.5 bits (68), Expect = 0.89
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = -2
Query: 512 PKXXPPRPPXGXXFXKTXXPPPPPP 438
P PP PP G PPPPPP
Sbjct: 630 PPPPPPPPPMGLPAVGAGAPPPPPP 654
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 31.5 bits (68), Expect = 0.89
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = -2
Query: 512 PKXXPPRPPXGXXFXKTXXPPPPPP 438
P PP PP G PPPPPP
Sbjct: 456 PPPPPPPPPMGLPAVGAGAPPPPPP 480
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 31.1 bits (67), Expect = 1.2
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = -1
Query: 501 PPPXPXGXPXX*NEXTPPPPP 439
PPP P G P +PPPPP
Sbjct: 239 PPPPPKGSPPLAGSGSPPPPP 259
Score = 29.1 bits (62), Expect = 4.8
Identities = 21/67 (31%), Positives = 23/67 (34%), Gaps = 4/67 (5%)
Frame = -2
Query: 626 PPFXXXXXFPPXSXXXVGXPXXPXXXXRXXXP--GXXXXGPKXXPPRPPXG--XXFXKTX 459
PP PP + G P P P G P PP PP G +
Sbjct: 238 PPPPPPKGSPPLAGS--GSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAG 295
Query: 458 XPPPPPP 438
PPPPPP
Sbjct: 296 SPPPPPP 302
Score = 29.1 bits (62), Expect = 4.8
Identities = 17/55 (30%), Positives = 18/55 (32%), Gaps = 1/55 (1%)
Frame = -1
Query: 600 PPXFPXXXGXPXXPLXXXPXXFXGXXXXGPKKXPPPXPXGX-PXX*NEXTPPPPP 439
PP P P G P PPP P G P +PPPPP
Sbjct: 247 PPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPP 301
Score = 29.1 bits (62), Expect = 4.8
Identities = 17/54 (31%), Positives = 18/54 (33%), Gaps = 1/54 (1%)
Frame = -1
Query: 597 PXFPXXXGXPXXPLXXXPXXFXGXXXXGPK-KXPPPXPXGXPXX*NEXTPPPPP 439
P P G P P P P PPP G P +PPPPP
Sbjct: 280 PPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPP 333
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 31.1 bits (67), Expect = 1.2
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = -1
Query: 501 PPPXPXGXPXX*NEXTPPPPP 439
PPP P G P +PPPPP
Sbjct: 260 PPPPPKGSPPLAGSGSPPPPP 280
Score = 29.1 bits (62), Expect = 4.8
Identities = 21/67 (31%), Positives = 23/67 (34%), Gaps = 4/67 (5%)
Frame = -2
Query: 626 PPFXXXXXFPPXSXXXVGXPXXPXXXXRXXXP--GXXXXGPKXXPPRPPXG--XXFXKTX 459
PP PP + G P P P G P PP PP G +
Sbjct: 259 PPPPPPKGSPPLAGS--GSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAG 316
Query: 458 XPPPPPP 438
PPPPPP
Sbjct: 317 SPPPPPP 323
Score = 29.1 bits (62), Expect = 4.8
Identities = 17/55 (30%), Positives = 18/55 (32%), Gaps = 1/55 (1%)
Frame = -1
Query: 600 PPXFPXXXGXPXXPLXXXPXXFXGXXXXGPKKXPPPXPXGX-PXX*NEXTPPPPP 439
PP P P G P PPP P G P +PPPPP
Sbjct: 268 PPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPP 322
Score = 29.1 bits (62), Expect = 4.8
Identities = 17/54 (31%), Positives = 18/54 (33%), Gaps = 1/54 (1%)
Frame = -1
Query: 597 PXFPXXXGXPXXPLXXXPXXFXGXXXXGPK-KXPPPXPXGXPXX*NEXTPPPPP 439
P P G P P P P PPP G P +PPPPP
Sbjct: 301 PPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPP 354
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 31.1 bits (67), Expect = 1.2
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = -1
Query: 501 PPPXPXGXPXX*NEXTPPPPP 439
PPP P G P +PPPPP
Sbjct: 245 PPPPPKGSPPLAGSGSPPPPP 265
Score = 29.1 bits (62), Expect = 4.8
Identities = 21/67 (31%), Positives = 23/67 (34%), Gaps = 4/67 (5%)
Frame = -2
Query: 626 PPFXXXXXFPPXSXXXVGXPXXPXXXXRXXXP--GXXXXGPKXXPPRPPXG--XXFXKTX 459
PP PP + G P P P G P PP PP G +
Sbjct: 244 PPPPPPKGSPPLAGS--GSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAG 301
Query: 458 XPPPPPP 438
PPPPPP
Sbjct: 302 SPPPPPP 308
Score = 29.1 bits (62), Expect = 4.8
Identities = 17/55 (30%), Positives = 18/55 (32%), Gaps = 1/55 (1%)
Frame = -1
Query: 600 PPXFPXXXGXPXXPLXXXPXXFXGXXXXGPKKXPPPXPXGX-PXX*NEXTPPPPP 439
PP P P G P PPP P G P +PPPPP
Sbjct: 253 PPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPP 307
Score = 29.1 bits (62), Expect = 4.8
Identities = 17/54 (31%), Positives = 18/54 (33%), Gaps = 1/54 (1%)
Frame = -1
Query: 597 PXFPXXXGXPXXPLXXXPXXFXGXXXXGPK-KXPPPXPXGXPXX*NEXTPPPPP 439
P P G P P P P PPP G P +PPPPP
Sbjct: 286 PPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPP 339
>AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical
protein T22D1.2 protein.
Length = 302
Score = 30.7 bits (66), Expect = 1.6
Identities = 18/54 (33%), Positives = 19/54 (35%)
Frame = -1
Query: 600 PPXFPXXXGXPXXPLXXXPXXFXGXXXXGPKKXPPPXPXGXPXX*NEXTPPPPP 439
PP P G P P P G + PPP G TPPPPP
Sbjct: 33 PPPPPKGTGTPPPPPTGEPQDLSGEGNASRRPPPPPKGTG--------TPPPPP 78
Score = 30.3 bits (65), Expect = 2.1
Identities = 18/54 (33%), Positives = 20/54 (37%)
Frame = -1
Query: 600 PPXFPXXXGXPXXPLXXXPXXFXGXXXXGPKKXPPPXPXGXPXX*NEXTPPPPP 439
PP P G P P P ++ PPP P G TPPPPP
Sbjct: 64 PPPPPKGTGTPPPPPTGEPQDLSAEEGNASRR-PPPPPKG------TGTPPPPP 110
Score = 29.1 bits (62), Expect = 4.8
Identities = 17/53 (32%), Positives = 18/53 (33%)
Frame = -1
Query: 600 PPXFPXXXGXPXXPLXXXPXXFXGXXXXGPKKXPPPXPXGXPXX*NEXTPPPP 442
PP P G P P P G + PPP G P PPPP
Sbjct: 96 PPPPPKGTGTPPPPPTGEPQDLSGEGNASRRPPPPPKGTGSP-------PPPP 141
Score = 29.1 bits (62), Expect = 4.8
Identities = 17/53 (32%), Positives = 18/53 (33%)
Frame = -1
Query: 600 PPXFPXXXGXPXXPLXXXPXXFXGXXXXGPKKXPPPXPXGXPXX*NEXTPPPP 442
PP P G P P P G + PPP G P PPPP
Sbjct: 127 PPPPPKGTGSPPPPPTGEPQDLSGEGNASRRPPPPPKGTGSP-------PPPP 172
Score = 29.1 bits (62), Expect = 4.8
Identities = 17/53 (32%), Positives = 18/53 (33%)
Frame = -1
Query: 600 PPXFPXXXGXPXXPLXXXPXXFXGXXXXGPKKXPPPXPXGXPXX*NEXTPPPP 442
PP P G P P P G + PPP G P PPPP
Sbjct: 220 PPPPPKGTGSPTPPPTGEPQDLSGEGNASRRPPPPPKGTGSP-------PPPP 265
>U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical
protein R144.4a protein.
Length = 360
Score = 30.3 bits (65), Expect = 2.1
Identities = 13/31 (41%), Positives = 15/31 (48%)
Frame = -1
Query: 531 GXXXXGPKKXPPPXPXGXPXX*NEXTPPPPP 439
G P PPP P P ++ TPPPPP
Sbjct: 149 GATSSAPPPPPPPPPVSVPS--SKPTPPPPP 177
>U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical
protein R144.4b protein.
Length = 362
Score = 30.3 bits (65), Expect = 2.1
Identities = 13/31 (41%), Positives = 15/31 (48%)
Frame = -1
Query: 531 GXXXXGPKKXPPPXPXGXPXX*NEXTPPPPP 439
G P PPP P P ++ TPPPPP
Sbjct: 149 GATSSAPPPPPPPPPVSVPS--SKPTPPPPP 177
>AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily
assigned gene nameprotein 268 protein.
Length = 881
Score = 30.3 bits (65), Expect = 2.1
Identities = 13/36 (36%), Positives = 15/36 (41%)
Frame = -3
Query: 499 PPXPXXAPXFXKRXXPPPPPXSXXXKTFPPLPLXXL 392
PP P + PPPPP K PP P+ L
Sbjct: 71 PPPPPLISILQQAPPPPPPPPPPTLKAPPPPPILGL 106
Score = 29.5 bits (63), Expect = 3.6
Identities = 11/25 (44%), Positives = 12/25 (48%)
Frame = -2
Query: 512 PKXXPPRPPXGXXFXKTXXPPPPPP 438
P PP PP + PPPPPP
Sbjct: 67 PPPPPPPPPLISILQQAPPPPPPPP 91
Score = 28.7 bits (61), Expect = 6.3
Identities = 12/33 (36%), Positives = 13/33 (39%)
Frame = -2
Query: 500 PPRPPXGXXFXKTXXPPPPPPXXXXXNXPXLAP 402
PP PP + PPPPPP P P
Sbjct: 70 PPPPPPLISILQQAPPPPPPPPPPTLKAPPPPP 102
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 29.9 bits (64), Expect = 2.7
Identities = 12/32 (37%), Positives = 12/32 (37%)
Frame = -2
Query: 533 PGXXXXGPKXXPPRPPXGXXFXKTXXPPPPPP 438
P P PP PP PPPPPP
Sbjct: 489 PAEVSKSPPPPPPLPPIATPSSVPPPPPPPPP 520
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 29.5 bits (63), Expect = 3.6
Identities = 16/56 (28%), Positives = 17/56 (30%)
Frame = -1
Query: 600 PPXFPXXXGXPXXPLXXXPXXFXGXXXXGPKKXPPPXPXGXPXX*NEXTPPPPPXL 433
PP P P P P+ P P P P PPPPP L
Sbjct: 143 PPRVPRTPPPRSPPPRRPPMTPPSPQRRPPRTPPSPEPRNPPRTPPSPIPPPPPRL 198
>AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform b protein.
Length = 774
Score = 29.1 bits (62), Expect = 4.8
Identities = 13/31 (41%), Positives = 14/31 (45%)
Frame = -1
Query: 531 GXXXXGPKKXPPPXPXGXPXX*NEXTPPPPP 439
G P PPP P P + TPPPPP
Sbjct: 67 GRPTESPPLPPPPLPLSNPPA--KPTPPPPP 95
>AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform a protein.
Length = 996
Score = 29.1 bits (62), Expect = 4.8
Identities = 13/31 (41%), Positives = 14/31 (45%)
Frame = -1
Query: 531 GXXXXGPKKXPPPXPXGXPXX*NEXTPPPPP 439
G P PPP P P + TPPPPP
Sbjct: 289 GRPTESPPLPPPPLPLSNPPA--KPTPPPPP 317
>Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical
protein C31C9.6 protein.
Length = 965
Score = 28.7 bits (61), Expect = 6.3
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = -2
Query: 509 KXXPPRPPXGXXFXKTXXPPPPPP 438
K PP PP + PPPPPP
Sbjct: 487 KSPPPPPPLPPIATPSSVPPPPPP 510
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 28.7 bits (61), Expect = 6.3
Identities = 13/37 (35%), Positives = 13/37 (35%)
Frame = -2
Query: 512 PKXXPPRPPXGXXFXKTXXPPPPPPXXXXXNXPXLAP 402
P PP PP PPPPPP P P
Sbjct: 559 PIPPPPPPPLPQNLSGAPPPPPPPPPMLGGPPPPPPP 595
>Z81034-4|CAB02729.1| 541|Caenorhabditis elegans Hypothetical
protein C15C6.3 protein.
Length = 541
Score = 28.3 bits (60), Expect = 8.3
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = -1
Query: 501 PPPXPXGXPXX*NEXTPPPPPXL 433
PPP P P E PPPPP +
Sbjct: 476 PPPPPPPPPENEPEEFPPPPPSI 498
>AL023835-10|CAA19494.2| 691|Caenorhabditis elegans Hypothetical
protein Y37A1B.11 protein.
Length = 691
Score = 28.3 bits (60), Expect = 8.3
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = -1
Query: 513 PKKXPPPXPXGXPXX*NEXTPPPPP 439
P++ P P P E TPPPPP
Sbjct: 552 PREPTPREPTPEPEPVREPTPPPPP 576
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,303,571
Number of Sequences: 27780
Number of extensions: 266868
Number of successful extensions: 2916
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 745
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1975
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2402214122
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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