Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP16_F_H05
         (873 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          23   4.9  
DQ325124-1|ABD14138.1|  179|Apis mellifera complementary sex det...    23   4.9  
DQ325123-1|ABD14137.1|  179|Apis mellifera complementary sex det...    23   4.9  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      23   4.9  
AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.          23   4.9  
DQ667188-1|ABG75740.1|  383|Apis mellifera histamine-gated chlor...    22   6.4  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    22   6.4  
DQ026038-1|AAY87897.1|  520|Apis mellifera nicotinic acetylcholi...    22   8.5  

>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 11/25 (44%), Positives = 15/25 (60%), Gaps = 2/25 (8%)
 Frame = +3

Query: 171 IYKKV--WISKLKENLPKLQQQVIN 239
           IYK +  +  K KENLPK   + +N
Sbjct: 420 IYKTILDYYHKYKENLPKYTTEELN 444


>DQ325124-1|ABD14138.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 11/37 (29%), Positives = 19/37 (51%)
 Frame = +3

Query: 201 KENLPKLQQQVINSNSIHMTYNCTKFHRLKTSLYKNL 311
           KE     + ++I+S S +  YN   + +L  + YK L
Sbjct: 71  KEREKSKEHKIISSLSNNYNYNNNNYKKLYCNNYKKL 107


>DQ325123-1|ABD14137.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 11/37 (29%), Positives = 19/37 (51%)
 Frame = +3

Query: 201 KENLPKLQQQVINSNSIHMTYNCTKFHRLKTSLYKNL 311
           KE     + ++I+S S +  YN   + +L  + YK L
Sbjct: 71  KEREKSKEHKIISSLSNNYNYNNNNYKKLYCNNYKKL 107


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 11/25 (44%), Positives = 15/25 (60%), Gaps = 2/25 (8%)
 Frame = +3

Query: 171 IYKKV--WISKLKENLPKLQQQVIN 239
           IYK +  +  K KENLPK   + +N
Sbjct: 420 IYKTILDYYHKYKENLPKYTTEELN 444


>AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.
          Length = 226

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 11/25 (44%), Positives = 15/25 (60%), Gaps = 2/25 (8%)
 Frame = +3

Query: 171 IYKKV--WISKLKENLPKLQQQVIN 239
           IYK +  +  K KENLPK   + +N
Sbjct: 46  IYKTILDYYHKYKENLPKYTTEELN 70


>DQ667188-1|ABG75740.1|  383|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 383

 Score = 22.2 bits (45), Expect = 6.4
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = +2

Query: 206 KSTKTPATGNQFELYPHDLQL 268
           K T   +   +FE YPHD Q+
Sbjct: 125 KLTLVLSCAMKFESYPHDTQI 145


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 22.2 bits (45), Expect = 6.4
 Identities = 9/13 (69%), Positives = 10/13 (76%)
 Frame = +3

Query: 183 VWISKLKENLPKL 221
           VWI+ L  NLPKL
Sbjct: 591 VWINCLDPNLPKL 603


>DQ026038-1|AAY87897.1|  520|Apis mellifera nicotinic acetylcholine
           receptor beta1subunit protein.
          Length = 520

 Score = 21.8 bits (44), Expect = 8.5
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = -3

Query: 259 VMWIEFELITCCWSFGRFSFN 197
           V +  F+  TC   FG ++FN
Sbjct: 155 VTYFPFDQQTCIMKFGSWTFN 175


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 189,805
Number of Sequences: 438
Number of extensions: 3535
Number of successful extensions: 19
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28280841
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)