Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP16_F_H04
         (894 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL132876-14|CAD21666.1|  486|Caenorhabditis elegans Hypothetical...    97   1e-20
Z83731-9|CAH10802.1| 1364|Caenorhabditis elegans Hypothetical pr...    29   5.9  
Z83731-8|CAH10801.1| 1490|Caenorhabditis elegans Hypothetical pr...    29   5.9  
Z83731-7|CAH10800.1| 1046|Caenorhabditis elegans Hypothetical pr...    29   5.9  
Z81505-5|CAH10795.1| 1364|Caenorhabditis elegans Hypothetical pr...    29   5.9  
Z81505-4|CAH10794.1| 1490|Caenorhabditis elegans Hypothetical pr...    29   5.9  
Z81505-3|CAH10793.1| 1046|Caenorhabditis elegans Hypothetical pr...    29   5.9  

>AL132876-14|CAD21666.1|  486|Caenorhabditis elegans Hypothetical
           protein Y105E8A.17 protein.
          Length = 486

 Score = 97.1 bits (231), Expect = 1e-20
 Identities = 48/106 (45%), Positives = 66/106 (62%), Gaps = 2/106 (1%)
 Frame = +3

Query: 387 AVKRPEGMHREVFALLYNDNKELPPLLPTDTGKAYKQTKARLGMRKVRKWVWAPFTNPAR 566
           A ++PEGM RE+F L+    K+L  ++PTD  K YKQ K + G R VRK+ W PFTN +R
Sbjct: 29  APRKPEGMKRELFNLM--SGKDLTAVMPTDVKKTYKQ-KFQTGFRSVRKYKWMPFTNESR 85

Query: 567 KDNAVFHHWKRAS--DEAKEYPFAQFNKQVSIPSYSEXRI*PILKI 698
            D  + HHW RA   +  + YPF++FNK + IP Y++      LKI
Sbjct: 86  DDGLMLHHWVRADKVEAMQPYPFSRFNKVIDIPIYTDDEYENYLKI 131



 Score = 43.2 bits (97), Expect = 3e-04
 Identities = 17/42 (40%), Positives = 25/42 (59%)
 Frame = +1

Query: 676 EYNQYLKSEDWSQAETDHLMDLCQRXXWEFMVIHDRWDRAAF 801
           EY  YLK   WS+ ETD+L D C+     + +++DR+D   F
Sbjct: 124 EYENYLKIAKWSREETDYLFDTCRMFDLRWPIVYDRFDCKKF 165


>Z83731-9|CAH10802.1| 1364|Caenorhabditis elegans Hypothetical
           protein F16A11.3b protein.
          Length = 1364

 Score = 28.7 bits (61), Expect = 5.9
 Identities = 17/41 (41%), Positives = 25/41 (60%)
 Frame = +3

Query: 234 NCKTADSINKLFDTKMADILDILDIEQPATEISRDSIIHGD 356
           N K+ DSI  L +T+  + L ILD ++    IS +S IHG+
Sbjct: 738 NLKSDDSIVML-NTEEKEKLGILDFDEMNMSISSNSSIHGE 777


>Z83731-8|CAH10801.1| 1490|Caenorhabditis elegans Hypothetical
           protein F16A11.3a protein.
          Length = 1490

 Score = 28.7 bits (61), Expect = 5.9
 Identities = 17/41 (41%), Positives = 25/41 (60%)
 Frame = +3

Query: 234 NCKTADSINKLFDTKMADILDILDIEQPATEISRDSIIHGD 356
           N K+ DSI  L +T+  + L ILD ++    IS +S IHG+
Sbjct: 864 NLKSDDSIVML-NTEEKEKLGILDFDEMNMSISSNSSIHGE 903


>Z83731-7|CAH10800.1| 1046|Caenorhabditis elegans Hypothetical
           protein F16A11.3c protein.
          Length = 1046

 Score = 28.7 bits (61), Expect = 5.9
 Identities = 17/41 (41%), Positives = 25/41 (60%)
 Frame = +3

Query: 234 NCKTADSINKLFDTKMADILDILDIEQPATEISRDSIIHGD 356
           N K+ DSI  L +T+  + L ILD ++    IS +S IHG+
Sbjct: 864 NLKSDDSIVML-NTEEKEKLGILDFDEMNMSISSNSSIHGE 903


>Z81505-5|CAH10795.1| 1364|Caenorhabditis elegans Hypothetical
           protein F16A11.3b protein.
          Length = 1364

 Score = 28.7 bits (61), Expect = 5.9
 Identities = 17/41 (41%), Positives = 25/41 (60%)
 Frame = +3

Query: 234 NCKTADSINKLFDTKMADILDILDIEQPATEISRDSIIHGD 356
           N K+ DSI  L +T+  + L ILD ++    IS +S IHG+
Sbjct: 738 NLKSDDSIVML-NTEEKEKLGILDFDEMNMSISSNSSIHGE 777


>Z81505-4|CAH10794.1| 1490|Caenorhabditis elegans Hypothetical
           protein F16A11.3a protein.
          Length = 1490

 Score = 28.7 bits (61), Expect = 5.9
 Identities = 17/41 (41%), Positives = 25/41 (60%)
 Frame = +3

Query: 234 NCKTADSINKLFDTKMADILDILDIEQPATEISRDSIIHGD 356
           N K+ DSI  L +T+  + L ILD ++    IS +S IHG+
Sbjct: 864 NLKSDDSIVML-NTEEKEKLGILDFDEMNMSISSNSSIHGE 903


>Z81505-3|CAH10793.1| 1046|Caenorhabditis elegans Hypothetical
           protein F16A11.3c protein.
          Length = 1046

 Score = 28.7 bits (61), Expect = 5.9
 Identities = 17/41 (41%), Positives = 25/41 (60%)
 Frame = +3

Query: 234 NCKTADSINKLFDTKMADILDILDIEQPATEISRDSIIHGD 356
           N K+ DSI  L +T+  + L ILD ++    IS +S IHG+
Sbjct: 864 NLKSDDSIVML-NTEEKEKLGILDFDEMNMSISSNSSIHGE 903


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,345,269
Number of Sequences: 27780
Number of extensions: 356479
Number of successful extensions: 852
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 819
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 849
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2265843888
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)