Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP16_F_H04
         (894 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325132-1|ABD14146.1|  189|Apis mellifera complementary sex det...    23   2.8  
DQ325131-1|ABD14145.1|  189|Apis mellifera complementary sex det...    23   2.8  
DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    23   3.8  
DQ325083-1|ABD14097.1|  189|Apis mellifera complementary sex det...    22   6.6  
AY569697-1|AAS86650.1|  413|Apis mellifera complementary sex det...    22   6.6  
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    22   8.7  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              22   8.7  

>DQ325132-1|ABD14146.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 23.4 bits (48), Expect = 2.8
 Identities = 12/31 (38%), Positives = 14/31 (45%), Gaps = 2/31 (6%)
 Frame = -1

Query: 843 YYNNXPSXF--YXXXXEXSPVPSIMYYHKFP 757
           Y NN    +  Y    E  PVP  +YY  FP
Sbjct: 109 YNNNYKKLYKNYIINIEQIPVPVPVYYGNFP 139


>DQ325131-1|ABD14145.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 23.4 bits (48), Expect = 2.8
 Identities = 12/31 (38%), Positives = 14/31 (45%), Gaps = 2/31 (6%)
 Frame = -1

Query: 843 YYNNXPSXF--YXXXXEXSPVPSIMYYHKFP 757
           Y NN    +  Y    E  PVP  +YY  FP
Sbjct: 109 YNNNYKKLYKNYIINIEQIPVPVPVYYGNFP 139


>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 23.0 bits (47), Expect = 3.8
 Identities = 12/28 (42%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
 Frame = +1

Query: 352 AIRTKRNMLPLKLSRGPRECIG-RFSHY 432
           A+ ++  M  L    GPR CIG RF+ Y
Sbjct: 425 AMASRHPMHYLPFGDGPRNCIGARFAVY 452


>DQ325083-1|ABD14097.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 22.2 bits (45), Expect = 6.6
 Identities = 12/29 (41%), Positives = 13/29 (44%)
 Frame = -1

Query: 843 YYNNXPSXFYXXXXEXSPVPSIMYYHKFP 757
           YY N     Y    E  PVP  +YY  FP
Sbjct: 116 YYKN-----YIINIEQIPVPVPVYYGNFP 139


>AY569697-1|AAS86650.1|  413|Apis mellifera complementary sex
           determiner protein.
          Length = 413

 Score = 22.2 bits (45), Expect = 6.6
 Identities = 12/29 (41%), Positives = 13/29 (44%)
 Frame = -1

Query: 843 YYNNXPSXFYXXXXEXSPVPSIMYYHKFP 757
           YY N     Y    E  PVP  +YY  FP
Sbjct: 341 YYKN-----YIINIEQIPVPVPVYYGNFP 364


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 21.8 bits (44), Expect = 8.7
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = +1

Query: 391 SRGPRECIGR 420
           S GPR C+GR
Sbjct: 482 SAGPRSCVGR 491


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 21.8 bits (44), Expect = 8.7
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = +1

Query: 529  ENGYGHHLLILHVKT 573
            E+G  HHL I+++KT
Sbjct: 1035 EDGKEHHLQIMNLKT 1049


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 222,078
Number of Sequences: 438
Number of extensions: 5308
Number of successful extensions: 16
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 28904421
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)